RNA–Protein interactions for RNA: ENST00000602308.1

TRIM11-205, Transcript of tripartite motif containing 11, humanhuman

TSL 3

Gene TRIM11, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-205ENST00000602308 KIF1BPQ96EK5 621 aa16.81■□□□□ 0.28
TRIM11-205ENST00000602308 RTKNQ9BST9 563 aa16.81■□□□□ 0.28
TRIM11-205ENST00000602308 BCAS3Q9H6U6 928 aa16.81■□□□□ 0.28
TRIM11-205ENST00000602308 AGO3Q9H9G7 860 aaKnown RBP16.81■□□□□ 0.28
TRIM11-205ENST00000602308 RNF216Q9NWF9 866 aaPredicted RBP16.81■□□□□ 0.28
TRIM11-205ENST00000602308 FBXL21Q9UKT6 434 aa16.81■□□□□ 0.28
TRIM11-205ENST00000602308 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.81■□□□□ 0.28
TRIM11-205ENST00000602308 PATL2C9JE40 543 aaKnown RBP16.8■□□□□ 0.28
TRIM11-205ENST00000602308 M0R2C6 588 aa16.8■□□□□ 0.28
TRIM11-205ENST00000602308 MTHFRP42898 656 aa16.8■□□□□ 0.28
TRIM11-205ENST00000602308 ARHGAP4P98171 946 aa16.8■□□□□ 0.28
TRIM11-205ENST00000602308 TPRNQ4KMQ1 711 aa16.8■□□□□ 0.28
TRIM11-205ENST00000602308 CASP10Q92851 521 aa16.8■□□□□ 0.28
TRIM11-205ENST00000602308 HCSTQ9UBK5 93 aa16.8■□□□□ 0.28
TRIM11-205ENST00000602308 CDV3Q9UKY7 258 aaKnown RBP16.8■□□□□ 0.28
TRIM11-205ENST00000602308 DUSP12Q9UNI6 340 aa16.8■□□□□ 0.28
TRIM11-205ENST00000602308 ANP32CO43423 234 aa16.79■□□□□ 0.28
TRIM11-205ENST00000602308 SLC3A2P08195 630 aaKnown RBP16.79■□□□□ 0.28
TRIM11-205ENST00000602308 GNAT2P19087 354 aa16.79■□□□□ 0.28
TRIM11-205ENST00000602308 UBA1P22314 1058 aaKnown RBP16.79■□□□□ 0.28
TRIM11-205ENST00000602308 CD52P31358 61 aa16.79■□□□□ 0.28
TRIM11-205ENST00000602308 TDGQ13569 410 aa16.79■□□□□ 0.28
TRIM11-205ENST00000602308 VARS2Q5ST30 1063 aaKnown RBP16.79■□□□□ 0.28
TRIM11-205ENST00000602308 TSHZ1Q6ZSZ6 1077 aa16.79■□□□□ 0.28
TRIM11-205ENST00000602308 APPBP2Q92624 585 aa16.79■□□□□ 0.28
TRIM11-205ENST00000602308 GPKOWQ92917 476 aaPredicted RBP eCLIP16.79■□□□□ 0.28
TRIM11-205ENST00000602308 CYP26B1Q9NR63 512 aa16.79■□□□□ 0.28
TRIM11-205ENST00000602308 PXMP2Q9NR77 195 aa16.79■□□□□ 0.28
TRIM11-205ENST00000602308 USTQ9Y2C2 406 aa16.79■□□□□ 0.28
TRIM11-205ENST00000602308 KRBA1A5PL33 1030 aa16.78■□□□□ 0.28
TRIM11-205ENST00000602308 PRR5-ARHGAP8B1AHC4 643 aa16.78■□□□□ 0.28
TRIM11-205ENST00000602308 STK25O00506 426 aa16.78■□□□□ 0.28
TRIM11-205ENST00000602308 EOMESO95936 686 aa16.78■□□□□ 0.28
TRIM11-205ENST00000602308 STAG3L1P0CL83 205 aa16.78■□□□□ 0.28
TRIM11-205ENST00000602308 PDHBP11177 359 aa16.78■□□□□ 0.28
TRIM11-205ENST00000602308 ARHGAP8P85298 464 aa16.78■□□□□ 0.28
TRIM11-205ENST00000602308 SPOUT1Q5T280 376 aaKnown RBP16.78■□□□□ 0.28
TRIM11-205ENST00000602308 KANK3Q6NY19 840 aa16.78■□□□□ 0.28
TRIM11-205ENST00000602308 THNSL1Q8IYQ7 743 aa16.78■□□□□ 0.28
TRIM11-205ENST00000602308 TCF25Q9BQ70 676 aa16.78■□□□□ 0.28
TRIM11-205ENST00000602308 TMEM47Q9BQJ4 181 aa16.78■□□□□ 0.28
TRIM11-205ENST00000602308 MAF1Q9H063 256 aa16.78■□□□□ 0.28
TRIM11-205ENST00000602308 MLXIPQ9HAP2 919 aa16.78■□□□□ 0.28
TRIM11-205ENST00000602308 AAASQ9NRG9 546 aa16.78■□□□□ 0.28
TRIM11-205ENST00000602308 NCDNQ9UBB6 729 aa16.78■□□□□ 0.28
TRIM11-205ENST00000602308 HCFC2Q9Y5Z7 792 aa16.78■□□□□ 0.28
TRIM11-205ENST00000602308 SCG2P13521 617 aa16.77■□□□□ 0.28
TRIM11-205ENST00000602308 TBC1D8BQ0IIM8 1120 aa16.77■□□□□ 0.28
TRIM11-205ENST00000602308 SPECC1Q5M775 1068 aa16.77■□□□□ 0.28
TRIM11-205ENST00000602308 TRIM50Q86XT4 487 aa16.77■□□□□ 0.28
TRIM11-205ENST00000602308 C1orf210Q8IVY1 113 aa16.77■□□□□ 0.28
TRIM11-205ENST00000602308 GPR161Q8N6U8 529 aaKnown RBP16.77■□□□□ 0.28
TRIM11-205ENST00000602308 C12orf76Q8N812 135 aaPredicted RBP16.77■□□□□ 0.28
TRIM11-205ENST00000602308 COLGALT1Q8NBJ5 622 aa16.77■□□□□ 0.28
TRIM11-205ENST00000602308 FEZF2Q8TBJ5 459 aa16.77■□□□□ 0.28
TRIM11-205ENST00000602308 USP26Q9BXU7 913 aa16.77■□□□□ 0.28
TRIM11-205ENST00000602308 CPVLQ9H3G5 476 aa16.77■□□□□ 0.28
TRIM11-205ENST00000602308 ENTPD7Q9NQZ7 604 aa16.77■□□□□ 0.28
TRIM11-205ENST00000602308 DLGAP2Q9P1A6 1054 aa16.77■□□□□ 0.28
TRIM11-205ENST00000602308 DBR1Q9UK59 544 aaKnown RBP16.77■□□□□ 0.28
TRIM11-205ENST00000602308 CDY2AQ9Y6F7 541 aa16.77■□□□□ 0.28
TRIM11-205ENST00000602308 ZFYVE26Q68DK2 2539 aa16.77■□□□□ 0.28
TRIM11-205ENST00000602308 NARSO43776 548 aaKnown RBP16.76■□□□□ 0.27
TRIM11-205ENST00000602308 KINO60870 393 aaKnown RBP16.76■□□□□ 0.27
TRIM11-205ENST00000602308 DCNP07585 359 aaKnown RBP16.76■□□□□ 0.27
TRIM11-205ENST00000602308 MYCLP12524 364 aaPredicted RBP16.76■□□□□ 0.27
TRIM11-205ENST00000602308 LMNB2Q03252 620 aa16.76■□□□□ 0.27
TRIM11-205ENST00000602308 CTDSPL2Q05D32 466 aa16.76■□□□□ 0.27
TRIM11-205ENST00000602308 ZNF543Q08ER8 600 aa16.76■□□□□ 0.27
TRIM11-205ENST00000602308 RARS2Q5T160 578 aaKnown RBP16.76■□□□□ 0.27
TRIM11-205ENST00000602308 ZKSCAN2Q63HK3 967 aa16.76■□□□□ 0.27
TRIM11-205ENST00000602308 KIAA1841Q6NSI8 718 aa16.76■□□□□ 0.27
TRIM11-205ENST00000602308 KCNV1Q6PIU1 500 aa16.76■□□□□ 0.27
TRIM11-205ENST00000602308 MRPS27Q92552 414 aaKnown RBP16.76■□□□□ 0.27
TRIM11-205ENST00000602308 KCNK12Q9HB15 430 aa16.76■□□□□ 0.27
TRIM11-205ENST00000602308 LZTS1Q9Y250 596 aa16.76■□□□□ 0.27
TRIM11-205ENST00000602308 CACNA1IQ9P0X4 2223 aa16.76■□□□□ 0.27
TRIM11-205ENST00000602308 CCDC171Q6TFL3 1326 aa16.75■□□□□ 0.27
TRIM11-205ENST00000602308 POTEMA6NI47 508 aa16.75■□□□□ 0.27
TRIM11-205ENST00000602308 RNF113AO15541 343 aaKnown RBP16.75■□□□□ 0.27
TRIM11-205ENST00000602308 RANBP6O60518 1105 aaKnown RBP16.75■□□□□ 0.27
TRIM11-205ENST00000602308 TOP1P11387 765 aaKnown RBP16.75■□□□□ 0.27
TRIM11-205ENST00000602308 TGM1P22735 817 aa16.75■□□□□ 0.27
TRIM11-205ENST00000602308 PLCB3Q01970 1234 aa16.75■□□□□ 0.27
TRIM11-205ENST00000602308 PPM1JQ5JR12 505 aa16.75■□□□□ 0.27
TRIM11-205ENST00000602308 ATAT1Q5SQI0 421 aa16.75■□□□□ 0.27
TRIM11-205ENST00000602308 TAF2Q6P1X5 1199 aa16.75■□□□□ 0.27
TRIM11-205ENST00000602308 POTEGQ6S5H5 508 aa16.75■□□□□ 0.27
TRIM11-205ENST00000602308 ITPRIPQ8IWB1 547 aa16.75■□□□□ 0.27
TRIM11-205ENST00000602308 MAML2Q8IZL2 1156 aaPredicted RBP16.75■□□□□ 0.27
TRIM11-205ENST00000602308 ZFP91Q96JP5 570 aaPredicted RBP16.75■□□□□ 0.27
TRIM11-205ENST00000602308 PDCD2LQ9BRP1 358 aa16.75■□□□□ 0.27
TRIM11-205ENST00000602308 FTHL17Q9BXU8 183 aa16.75■□□□□ 0.27
TRIM11-205ENST00000602308 NAPBQ9H115 298 aa16.75■□□□□ 0.27
TRIM11-205ENST00000602308 NGRNQ9NPE2 291 aaKnown RBP16.75■□□□□ 0.27
TRIM11-205ENST00000602308 TYW1Q9NV66 732 aaKnown RBP16.75■□□□□ 0.27
TRIM11-205ENST00000602308 TELO2Q9Y4R8 837 aa16.75■□□□□ 0.27
TRIM11-205ENST00000602308 FRYQ5TBA9 3013 aa16.75■□□□□ 0.27
TRIM11-205ENST00000602308 ABCB11O95342 1321 aa16.74■□□□□ 0.27
TRIM11-205ENST00000602308 SPEGQ15772 3267 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms