RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 TMCO2Q7Z6W1 182 aaPredicted RBP29.63■■■□□ 2.33
PNKP-216ENST00000601816 SEPT8Q92599 483 aa29.63■■■□□ 2.33
PNKP-216ENST00000601816 TNPO1Q92973 898 aaKnown RBP29.63■■■□□ 2.33
PNKP-216ENST00000601816 SH3GLB2Q9NR46 395 aa29.63■■■□□ 2.33
PNKP-216ENST00000601816 TRPC6Q9Y210 931 aa29.63■■■□□ 2.33
PNKP-216ENST00000601816 EYSQ5T1H1 3165 aa29.62■■■□□ 2.33
PNKP-216ENST00000601816 RBAK-RBAKDNI3L0D1 243 aa29.62■■■□□ 2.33
PNKP-216ENST00000601816 STAT5BP51692 787 aa29.62■■■□□ 2.33
PNKP-216ENST00000601816 IGBP1P78318 339 aa29.62■■■□□ 2.33
PNKP-216ENST00000601816 SETQ01105 290 aaPredicted RBP29.62■■■□□ 2.33
PNKP-216ENST00000601816 STK3Q13188 491 aa29.62■■■□□ 2.33
PNKP-216ENST00000601816 PLPPR4Q7Z2D5 763 aa29.62■■■□□ 2.33
PNKP-216ENST00000601816 RPAINQ86UA6 219 aa29.62■■■□□ 2.33
PNKP-216ENST00000601816 RSPH3Q86UC2 560 aa29.62■■■□□ 2.33
PNKP-216ENST00000601816 PTPRSQ13332 1948 aa29.62■■■□□ 2.33
PNKP-216ENST00000601816 MBLAC1A4D2B0 266 aaPredicted RBP29.61■■■□□ 2.33
PNKP-216ENST00000601816 RRN3P2A6NIE6 340 aa29.61■■■□□ 2.33
PNKP-216ENST00000601816 INSRRP14616 1297 aa29.61■■■□□ 2.33
PNKP-216ENST00000601816 NLRP5P59047 1200 aa29.61■■■□□ 2.33
PNKP-216ENST00000601816 TAP1Q03518 808 aa29.61■■■□□ 2.33
PNKP-216ENST00000601816 USP38Q8NB14 1042 aa29.61■■■□□ 2.33
PNKP-216ENST00000601816 KAT6AQ92794 2004 aa29.61■■■□□ 2.33
PNKP-216ENST00000601816 IPO5O00410 1097 aaKnown RBP29.6■■■□□ 2.33
PNKP-216ENST00000601816 DLL1O00548 723 aa29.6■■■□□ 2.33
PNKP-216ENST00000601816 ARHGEF15O94989 841 aa29.6■■■□□ 2.33
PNKP-216ENST00000601816 ATG7O95352 703 aa29.6■■■□□ 2.33
PNKP-216ENST00000601816 GJB5O95377 273 aa29.6■■■□□ 2.33
PNKP-216ENST00000601816 DEXIO95424 95 aa29.6■■■□□ 2.33
PNKP-216ENST00000601816 CCNE2O96020 404 aa29.6■■■□□ 2.33
PNKP-216ENST00000601816 AMHP03971 560 aa29.6■■■□□ 2.33
PNKP-216ENST00000601816 MARCH8Q5T0T0 291 aa29.6■■■□□ 2.33
PNKP-216ENST00000601816 LIN28BQ6ZN17 250 aaKnown RBP eCLIP29.6■■■□□ 2.33
PNKP-216ENST00000601816 ZNF577Q9BSK1 485 aa29.6■■■□□ 2.33
PNKP-216ENST00000601816 CERS4Q9HA82 394 aa29.6■■■□□ 2.33
PNKP-216ENST00000601816 MYO9BQ13459 2157 aa29.59■■■□□ 2.33
PNKP-216ENST00000601816 ANAPC15P60006 121 aa29.59■■■□□ 2.33
PNKP-216ENST00000601816 PLCB4Q15147 1175 aa29.59■■■□□ 2.33
PNKP-216ENST00000601816 PPM1EQ8WY54 764 aa29.59■■■□□ 2.33
PNKP-216ENST00000601816 UIMC1Q96RL1 719 aa29.59■■■□□ 2.33
PNKP-216ENST00000601816 RAD9AQ99638 391 aa29.59■■■□□ 2.33
PNKP-216ENST00000601816 OSBPL7Q9BZF2 842 aa29.59■■■□□ 2.33
PNKP-216ENST00000601816 BACH1O14867 736 aa29.58■■■□□ 2.33
PNKP-216ENST00000601816 DHX15O43143 795 aaKnown RBP29.58■■■□□ 2.33
PNKP-216ENST00000601816 CHRNA1P02708 482 aa29.58■■■□□ 2.33
PNKP-216ENST00000601816 CIITAP33076 1130 aa29.58■■■□□ 2.33
PNKP-216ENST00000601816 SLC26A2P50443 739 aa29.58■■■□□ 2.33
PNKP-216ENST00000601816 MKRN4PQ13434 485 aaPredicted RBP29.58■■■□□ 2.33
PNKP-216ENST00000601816 PRR16Q569H4 304 aa29.58■■■□□ 2.33
PNKP-216ENST00000601816 FAM160B1Q5W0V3 765 aa29.58■■■□□ 2.33
PNKP-216ENST00000601816 FAM117BQ6P1L5 589 aa29.58■■■□□ 2.33
PNKP-216ENST00000601816 DNAJB3Q8WWF6 145 aa29.58■■■□□ 2.33
PNKP-216ENST00000601816 TBC1D22BQ9NU19 505 aa29.58■■■□□ 2.33
PNKP-216ENST00000601816 CHD7Q9P2D1 2997 aa29.58■■■□□ 2.33
PNKP-216ENST00000601816 IGKV6D-21A0A0A0MT36 114 aa29.57■■■□□ 2.32
PNKP-216ENST00000601816 LCHNA4D1U4 455 aa29.57■■■□□ 2.32
PNKP-216ENST00000601816 RPLP2P05387 115 aaKnown RBP29.57■■■□□ 2.32
PNKP-216ENST00000601816 MIS18BP1Q6P0N0 1132 aa29.57■■■□□ 2.32
PNKP-216ENST00000601816 ABHD15Q6UXT9 468 aa29.57■■■□□ 2.32
PNKP-216ENST00000601816 MYOCDQ8IZQ8 938 aa29.57■■■□□ 2.32
PNKP-216ENST00000601816 ARNTL2Q8WYA1 636 aa29.57■■■□□ 2.32
PNKP-216ENST00000601816 APBB2Q92870 758 aa29.57■■■□□ 2.32
PNKP-216ENST00000601816 IFIH1Q9BYX4 1025 aaKnown RBP29.57■■■□□ 2.32
PNKP-216ENST00000601816 TCEAL9Q9UHQ7 104 aa29.57■■■□□ 2.32
PNKP-216ENST00000601816 UNC80Q8N2C7 3258 aa29.56■■■□□ 2.32
PNKP-216ENST00000601816 POTEB3A0JP26 581 aa29.56■■■□□ 2.32
PNKP-216ENST00000601816 MGAT3Q09327 533 aa29.56■■■□□ 2.32
PNKP-216ENST00000601816 POTEBQ6S5H4 581 aa29.56■■■□□ 2.32
PNKP-216ENST00000601816 PCDHA4Q9UN74 947 aa29.56■■■□□ 2.32
PNKP-216ENST00000601816 RFXAPO00287 272 aa29.55■■■□□ 2.32
PNKP-216ENST00000601816 CDKL5O76039 1030 aa29.55■■■□□ 2.32
PNKP-216ENST00000601816 GHRP10912 638 aa29.55■■■□□ 2.32
PNKP-216ENST00000601816 CCDC60Q8IWA6 550 aaPredicted RBP29.55■■■□□ 2.32
PNKP-216ENST00000601816 TRAPPC12Q8WVT3 735 aa29.55■■■□□ 2.32
PNKP-216ENST00000601816 ZBTB10Q96DT7 871 aa29.55■■■□□ 2.32
PNKP-216ENST00000601816 C22orf23Q9BZE7 217 aa29.55■■■□□ 2.32
PNKP-216ENST00000601816 FAM49AQ9H0Q0 323 aaPredicted RBP29.55■■■□□ 2.32
PNKP-216ENST00000601816 SLKQ9H2G2 1235 aaPredicted RBP29.55■■■□□ 2.32
PNKP-216ENST00000601816 ZNF302Q9NR11 478 aa29.55■■■□□ 2.32
PNKP-216ENST00000601816 CDY2AQ9Y6F7 541 aa29.55■■■□□ 2.32
PNKP-216ENST00000601816 MICAL3Q7RTP6 2002 aa29.55■■■□□ 2.32
PNKP-216ENST00000601816 A0A0C4DFX4 3053 aa29.54■■■□□ 2.32
PNKP-216ENST00000601816 EIF5BO60841 1220 aaKnown RBP29.54■■■□□ 2.32
PNKP-216ENST00000601816 CCDC85BQ15834 202 aaPredicted RBP29.54■■■□□ 2.32
PNKP-216ENST00000601816 ZNF746Q6NUN9 644 aaPredicted RBP29.54■■■□□ 2.32
PNKP-216ENST00000601816 PDXDC2PQ6P474 469 aa29.54■■■□□ 2.32
PNKP-216ENST00000601816 FAM177A1Q8N128 213 aaPredicted RBP29.54■■■□□ 2.32
PNKP-216ENST00000601816 PCDHA2Q9Y5H9 948 aa29.54■■■□□ 2.32
PNKP-216ENST00000601816 EPOPA6NHQ4 379 aa29.53■■■□□ 2.32
PNKP-216ENST00000601816 HBP1O60381 514 aa29.53■■■□□ 2.32
PNKP-216ENST00000601816 USP11P51784 963 aa29.53■■■□□ 2.32
PNKP-216ENST00000601816 MRPS6P82932 125 aaKnown RBP29.53■■■□□ 2.32
PNKP-216ENST00000601816 KRT76Q01546 638 aa29.53■■■□□ 2.32
PNKP-216ENST00000601816 SCRN1Q12765 414 aa29.53■■■□□ 2.32
PNKP-216ENST00000601816 SWSAP1Q6NVH7 229 aa29.53■■■□□ 2.32
PNKP-216ENST00000601816 SMAP1Q8IYB5 467 aaPredicted RBP29.53■■■□□ 2.32
PNKP-216ENST00000601816 BLIDQ8IZY5 108 aa29.53■■■□□ 2.32
PNKP-216ENST00000601816 ATP8B4Q8TF62 1192 aa29.53■■■□□ 2.32
PNKP-216ENST00000601816 LENG9Q96B70 501 aa29.53■■■□□ 2.32
PNKP-216ENST00000601816 AIFM3Q96NN9 605 aa29.53■■■□□ 2.32
PNKP-216ENST00000601816 TPCN1Q9ULQ1 816 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms