RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 MED7O43513 233 aa13.1□□□□□ -0.31
SHANK2-218ENST00000601538 MAPK4P31152 587 aa13.1□□□□□ -0.31
SHANK2-218ENST00000601538 RIPPLY1Q0D2K3 151 aa13.1□□□□□ -0.31
SHANK2-218ENST00000601538 CAPN12Q6ZSI9 719 aa13.1□□□□□ -0.31
SHANK2-218ENST00000601538 PCP11498 1178 aaKnown RBP13.1□□□□□ -0.31
SHANK2-218ENST00000601538 TJAP1Q5JTD0 557 aa13.1□□□□□ -0.31
SHANK2-218ENST00000601538 KRT40Q6A162 431 aa13.1□□□□□ -0.31
SHANK2-218ENST00000601538 POTEAQ6S8J7 498 aa13.1□□□□□ -0.31
SHANK2-218ENST00000601538 LMBR1LQ6UX01 489 aa13.1□□□□□ -0.31
SHANK2-218ENST00000601538 MAGEC3Q8TD91 643 aa13.1□□□□□ -0.31
SHANK2-218ENST00000601538 EYA3Q99504 573 aa13.1□□□□□ -0.31
SHANK2-218ENST00000601538 TUBGCP2Q9BSJ2 902 aa13.1□□□□□ -0.31
SHANK2-218ENST00000601538 C19orf44Q9H6X5 657 aa13.1□□□□□ -0.31
SHANK2-218ENST00000601538 ZFATQ9P243 1243 aa13.1□□□□□ -0.31
SHANK2-218ENST00000601538 WASLO00401 505 aaPredicted RBP13.1□□□□□ -0.31
SHANK2-218ENST00000601538 PMLP29590 882 aa13.1□□□□□ -0.31
SHANK2-218ENST00000601538 FAM178BQ8IXR5 827 aa13.1□□□□□ -0.31
SHANK2-218ENST00000601538 BHMT2Q9H2M3 363 aa13.1□□□□□ -0.31
SHANK2-218ENST00000601538 PPARGC1AQ9UBK2 798 aaKnown RBP13.1□□□□□ -0.31
SHANK2-218ENST00000601538 CAB39Q9Y376 341 aaPredicted RBP13.1□□□□□ -0.31
SHANK2-218ENST00000601538 PPP1R37O75864 691 aa13.09□□□□□ -0.31
SHANK2-218ENST00000601538 SMARCA1P28370 1054 aa13.09□□□□□ -0.31
SHANK2-218ENST00000601538 PIK3CAP42336 1068 aa13.09□□□□□ -0.31
SHANK2-218ENST00000601538 TMEM245Q9H330 911 aa13.09□□□□□ -0.31
SHANK2-218ENST00000601538 PICK1Q9NRD5 415 aa13.09□□□□□ -0.31
SHANK2-218ENST00000601538 ABCF3Q9NUQ8 709 aa13.09□□□□□ -0.31
SHANK2-218ENST00000601538 SAMD9LQ8IVG5 1584 aa13.09□□□□□ -0.31
SHANK2-218ENST00000601538 HSPA4LO95757 839 aa13.09□□□□□ -0.31
SHANK2-218ENST00000601538 POLR2FP61218 127 aaKnown RBP13.09□□□□□ -0.31
SHANK2-218ENST00000601538 ASCC2Q9H1I8 757 aaPredicted RBP13.09□□□□□ -0.31
SHANK2-218ENST00000601538 FANCLQ9NW38 375 aa13.09□□□□□ -0.31
SHANK2-218ENST00000601538 SRGAP2CP0DJJ0 459 aa13.09□□□□□ -0.31
SHANK2-218ENST00000601538 PECAM1P16284 738 aaPredicted RBP13.09□□□□□ -0.31
SHANK2-218ENST00000601538 RUNX1T1Q06455 604 aa13.09□□□□□ -0.31
SHANK2-218ENST00000601538 ANGPT1Q15389 498 aa13.09□□□□□ -0.31
SHANK2-218ENST00000601538 CCDC85BQ15834 202 aaPredicted RBP13.09□□□□□ -0.31
SHANK2-218ENST00000601538 RGS9BPQ6ZS82 235 aa13.09□□□□□ -0.31
SHANK2-218ENST00000601538 ZBTB8OSQ8IWT0 167 aa13.09□□□□□ -0.31
SHANK2-218ENST00000601538 DNAAF3Q8N9W5 541 aa13.09□□□□□ -0.31
SHANK2-218ENST00000601538 XAGE3Q8WTP9 111 aa13.09□□□□□ -0.31
SHANK2-218ENST00000601538 ABCB6Q9NP58 842 aa13.09□□□□□ -0.31
SHANK2-218ENST00000601538 MBD2Q9UBB5 411 aa13.09□□□□□ -0.31
SHANK2-218ENST00000601538 KIAA0586Q9BVV6 1533 aa13.09□□□□□ -0.31
SHANK2-218ENST00000601538 PBRM1Q86U86 1689 aa13.09□□□□□ -0.31
SHANK2-218ENST00000601538 GRIN2AQ12879 1464 aa13.09□□□□□ -0.31
SHANK2-218ENST00000601538 DNAJC6O75061 913 aa13.09□□□□□ -0.31
SHANK2-218ENST00000601538 FSBPO95073 299 aa13.09□□□□□ -0.31
SHANK2-218ENST00000601538 NT5C2P49902 561 aa13.09□□□□□ -0.31
SHANK2-218ENST00000601538 ST13P50502 369 aaKnown RBP13.09□□□□□ -0.31
SHANK2-218ENST00000601538 ITIH4Q14624 930 aa13.09□□□□□ -0.31
SHANK2-218ENST00000601538 ST13P5Q8NFI4 369 aaPredicted RBP13.09□□□□□ -0.31
SHANK2-218ENST00000601538 KCND1Q9NSA2 647 aa13.09□□□□□ -0.31
SHANK2-218ENST00000601538 B4E1Z4 1266 aa13.09□□□□□ -0.31
SHANK2-218ENST00000601538 HNRNPH1P31943 449 aaKnown RBP13.09□□□□□ -0.31
SHANK2-218ENST00000601538 TMPRSS15P98073 1019 aa13.09□□□□□ -0.31
SHANK2-218ENST00000601538 SPHKAPQ2M3C7 1700 aa13.09□□□□□ -0.31
SHANK2-218ENST00000601538 CYP4F22Q6NT55 531 aa13.09□□□□□ -0.31
SHANK2-218ENST00000601538 SCYL2Q6P3W7 929 aa13.09□□□□□ -0.31
SHANK2-218ENST00000601538 BEND6Q5SZJ8 279 aaPredicted RBP13.09□□□□□ -0.31
SHANK2-218ENST00000601538 WDR93Q6P2C0 686 aa13.09□□□□□ -0.31
SHANK2-218ENST00000601538 RAD23BP54727 409 aa13.09□□□□□ -0.31
SHANK2-218ENST00000601538 DDI1Q8WTU0 396 aa13.09□□□□□ -0.31
SHANK2-218ENST00000601538 PLEKHA4Q9H4M7 779 aa13.09□□□□□ -0.31
SHANK2-218ENST00000601538 TRIM66O15016 1216 aa13.08□□□□□ -0.31
SHANK2-218ENST00000601538 TJP3O95049 919 aa13.08□□□□□ -0.31
SHANK2-218ENST00000601538 TRAPPC10P48553 1259 aa13.08□□□□□ -0.31
SHANK2-218ENST00000601538 KLHL38Q2WGJ6 581 aa13.08□□□□□ -0.31
SHANK2-218ENST00000601538 PBXIP1Q96AQ6 731 aa13.08□□□□□ -0.31
SHANK2-218ENST00000601538 BTBD6Q96KE9 485 aa13.08□□□□□ -0.31
SHANK2-218ENST00000601538 XPO1O14980 1071 aaKnown RBP13.08□□□□□ -0.32
SHANK2-218ENST00000601538 DIAPH2O60879 1101 aa13.08□□□□□ -0.32
SHANK2-218ENST00000601538 OCM2P0CE71 109 aa13.08□□□□□ -0.32
SHANK2-218ENST00000601538 OCMP0CE72 109 aaPredicted RBP13.08□□□□□ -0.32
SHANK2-218ENST00000601538 GGCXP38435 758 aa13.08□□□□□ -0.32
SHANK2-218ENST00000601538 MYL7Q01449 175 aa13.08□□□□□ -0.32
SHANK2-218ENST00000601538 SPDYE1Q8NFV5 336 aaPredicted RBP13.08□□□□□ -0.32
SHANK2-218ENST00000601538 ABCC4O15439 1325 aa13.08□□□□□ -0.32
SHANK2-218ENST00000601538 ZMYM6O95789 1325 aa13.08□□□□□ -0.32
SHANK2-218ENST00000601538 TOPBP1Q92547 1522 aa13.08□□□□□ -0.32
SHANK2-218ENST00000601538 SPDYE2BA6NHP3 402 aa13.08□□□□□ -0.32
SHANK2-218ENST00000601538 SPDYE6P0CI01 402 aa13.08□□□□□ -0.32
SHANK2-218ENST00000601538 LIG4P49917 911 aa13.08□□□□□ -0.32
SHANK2-218ENST00000601538 EFTUD2Q15029 972 aaKnown RBP eCLIP13.08□□□□□ -0.321e-6■■■□□ 15.8
SHANK2-218ENST00000601538 OLA1Q9NTK5 396 aaKnown RBP13.08□□□□□ -0.32
SHANK2-218ENST00000601538 CEP170Q5SW79 1584 aa13.08□□□□□ -0.32
SHANK2-218ENST00000601538 SEC31AO94979 1220 aaKnown RBP13.08□□□□□ -0.32
SHANK2-218ENST00000601538 MBD4O95243 580 aa13.08□□□□□ -0.32
SHANK2-218ENST00000601538 SERPING1P05155 500 aa13.08□□□□□ -0.32
SHANK2-218ENST00000601538 CYP2J2P51589 502 aa13.08□□□□□ -0.32
SHANK2-218ENST00000601538 CNGA2Q16280 664 aa13.08□□□□□ -0.32
SHANK2-218ENST00000601538 DEPTORQ8TB45 409 aa13.08□□□□□ -0.32
SHANK2-218ENST00000601538 SMCO2A6NFE2 343 aa13.08□□□□□ -0.32
SHANK2-218ENST00000601538 NBNO60934 754 aa13.08□□□□□ -0.32
SHANK2-218ENST00000601538 A0A0G2JND7 137 aa13.08□□□□□ -0.32
SHANK2-218ENST00000601538 SLC1A4P43007 532 aa13.08□□□□□ -0.32
SHANK2-218ENST00000601538 MIEF2Q96C03 454 aa13.08□□□□□ -0.32
SHANK2-218ENST00000601538 CNOT6LQ96LI5 555 aaKnown RBP13.08□□□□□ -0.32
SHANK2-218ENST00000601538 MED10Q9BTT4 135 aa13.08□□□□□ -0.32
SHANK2-218ENST00000601538 TBK1Q9UHD2 729 aa13.08□□□□□ -0.32
SHANK2-218ENST00000601538 NOVA2Q9UNW9 492 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms