RNA–Protein interactions for RNA: ENST00000601141.5

SIN3B-211, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2

Gene SIN3B, Length 1,473 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-211ENST00000601141 IGKV6D-21A0A0A0MT36 114 aa23.1■■□□□ 1.29
SIN3B-211ENST00000601141 NBPF20Q3BBV1 942 aa23.1■■□□□ 1.29
SIN3B-211ENST00000601141 PDXDC2PQ6P474 469 aa23.1■■□□□ 1.29
SIN3B-211ENST00000601141 SLC39A5Q6ZMH5 540 aa23.1■■□□□ 1.29
SIN3B-211ENST00000601141 FXR2P51116 673 aaKnown RBP eCLIP23.09■■□□□ 1.29
SIN3B-211ENST00000601141 DNM1Q05193 864 aaKnown RBP23.09■■□□□ 1.29
SIN3B-211ENST00000601141 FAM47CQ5HY64 1035 aa23.09■■□□□ 1.29
SIN3B-211ENST00000601141 ARL6IP4Q66PJ3 421 aaKnown RBP23.09■■□□□ 1.29
SIN3B-211ENST00000601141 PLPPR4Q7Z2D5 763 aa23.09■■□□□ 1.29
SIN3B-211ENST00000601141 AFAP1L1Q8TED9 768 aa23.09■■□□□ 1.29
SIN3B-211ENST00000601141 RAB34Q9BZG1 259 aa23.09■■□□□ 1.29
SIN3B-211ENST00000601141 CIZ1Q9ULV3 898 aaPredicted RBP23.09■■□□□ 1.29
SIN3B-211ENST00000601141 VWA3AA6NCI4 1184 aa23.08■■□□□ 1.29
SIN3B-211ENST00000601141 HAS3O00219 553 aa23.08■■□□□ 1.29
SIN3B-211ENST00000601141 STK38Q15208 465 aa23.08■■□□□ 1.29
SIN3B-211ENST00000601141 PTPAQ15257 358 aa23.08■■□□□ 1.29
SIN3B-211ENST00000601141 EPHA7Q15375 998 aa23.08■■□□□ 1.29
SIN3B-211ENST00000601141 CKAP2LQ8IYA6 745 aa23.08■■□□□ 1.29
SIN3B-211ENST00000601141 BANK1Q8NDB2 785 aa23.08■■□□□ 1.29
SIN3B-211ENST00000601141 GRIN2DO15399 1336 aa23.07■■□□□ 1.28
SIN3B-211ENST00000601141 ARVCFO00192 962 aa23.07■■□□□ 1.28
SIN3B-211ENST00000601141 NCLP19338 710 aaKnown RBP23.07■■□□□ 1.28
SIN3B-211ENST00000601141 MARCKSP29966 332 aaPredicted RBP23.07■■□□□ 1.28
SIN3B-211ENST00000601141 NASPP49321 788 aaPredicted RBP23.07■■□□□ 1.28
SIN3B-211ENST00000601141 IL17AQ16552 155 aa23.07■■□□□ 1.28
SIN3B-211ENST00000601141 UGCGQ16739 394 aa23.07■■□□□ 1.28
SIN3B-211ENST00000601141 LRRC26Q2I0M4 334 aa23.07■■□□□ 1.28
SIN3B-211ENST00000601141 TRMT1LQ7Z2T5 733 aaKnown RBP23.07■■□□□ 1.28
SIN3B-211ENST00000601141 C7orf31Q8N865 590 aa23.07■■□□□ 1.28
SIN3B-211ENST00000601141 ATP6V0A1Q93050 837 aa23.07■■□□□ 1.28
SIN3B-211ENST00000601141 RNPEPQ9H4A4 650 aa23.07■■□□□ 1.28
SIN3B-211ENST00000601141 LRWD1Q9UFC0 647 aa23.07■■□□□ 1.28
SIN3B-211ENST00000601141 MAFBQ9Y5Q3 323 aaPredicted RBP23.07■■□□□ 1.28
SIN3B-211ENST00000601141 IGSF9BQ9UPX0 1349 aa23.07■■□□□ 1.28
SIN3B-211ENST00000601141 SCN10AQ9Y5Y9 1956 aa23.06■■□□□ 1.28
SIN3B-211ENST00000601141 SLC26A2P50443 739 aa23.06■■□□□ 1.28
SIN3B-211ENST00000601141 CYP4A11Q02928 519 aa23.06■■□□□ 1.28
SIN3B-211ENST00000601141 ATL3Q6DD88 541 aa23.06■■□□□ 1.28
SIN3B-211ENST00000601141 NFRKBQ6P4R8 1299 aa23.06■■□□□ 1.28
SIN3B-211ENST00000601141 ERMNQ8TAM6 284 aa23.06■■□□□ 1.28
SIN3B-211ENST00000601141 EIF2AK1Q9BQI3 630 aaKnown RBP23.06■■□□□ 1.28
SIN3B-211ENST00000601141 CFAP45Q9UL16 551 aa23.06■■□□□ 1.28
SIN3B-211ENST00000601141 TRPC6Q9Y210 931 aa23.06■■□□□ 1.28
SIN3B-211ENST00000601141 P4HBP07237 508 aaKnown RBP23.05■■□□□ 1.28
SIN3B-211ENST00000601141 PDIA5Q14554 519 aa23.05■■□□□ 1.28
SIN3B-211ENST00000601141 SLC39A14Q15043 492 aa23.05■■□□□ 1.28
SIN3B-211ENST00000601141 TRIM60Q495X7 471 aa23.05■■□□□ 1.28
SIN3B-211ENST00000601141 IGSF22Q8N9C0 903 aa23.05■■□□□ 1.28
SIN3B-211ENST00000601141 DYDC2Q96IM9 177 aa23.05■■□□□ 1.28
SIN3B-211ENST00000601141 HTATIP2Q9BUP3 242 aa23.05■■□□□ 1.28
SIN3B-211ENST00000601141 RGL1Q9NZL6 768 aa23.05■■□□□ 1.28
SIN3B-211ENST00000601141 CHMP5Q9NZZ3 219 aa23.05■■□□□ 1.28
SIN3B-211ENST00000601141 HDAC6Q9UBN7 1215 aa23.05■■□□□ 1.28
SIN3B-211ENST00000601141 ATP11BQ9Y2G3 1177 aa23.05■■□□□ 1.28
SIN3B-211ENST00000601141 POTEB3A0JP26 581 aa23.05■■□□□ 1.28
SIN3B-211ENST00000601141 PQBP1O60828 265 aaKnown RBP23.05■■□□□ 1.28
SIN3B-211ENST00000601141 YEATS4O95619 227 aa23.05■■□□□ 1.28
SIN3B-211ENST00000601141 SMIM10L2AP0DMW4 78 aa23.05■■□□□ 1.28
SIN3B-211ENST00000601141 SMIM10L2BP0DMW5 78 aa23.05■■□□□ 1.28
SIN3B-211ENST00000601141 QARSP47897 775 aaKnown RBP23.05■■□□□ 1.28
SIN3B-211ENST00000601141 RTP1P59025 263 aa23.05■■□□□ 1.28
SIN3B-211ENST00000601141 PSMC5P62195 406 aa23.05■■□□□ 1.28
SIN3B-211ENST00000601141 KRT85P78386 507 aa23.05■■□□□ 1.28
SIN3B-211ENST00000601141 PRKCEQ02156 737 aa23.05■■□□□ 1.28
SIN3B-211ENST00000601141 SNX17Q15036 470 aa23.05■■□□□ 1.28
SIN3B-211ENST00000601141 PLCB4Q15147 1175 aa23.05■■□□□ 1.28
SIN3B-211ENST00000601141 POTEBQ6S5H4 581 aa23.05■■□□□ 1.28
SIN3B-211ENST00000601141 SLC43A3Q8NBI5 491 aa23.05■■□□□ 1.28
SIN3B-211ENST00000601141 LINC00301Q8NCQ3 95 aa23.05■■□□□ 1.28
SIN3B-211ENST00000601141 NEK9Q8TD19 979 aa23.05■■□□□ 1.28
SIN3B-211ENST00000601141 CHAMP1Q96JM3 812 aa23.05■■□□□ 1.28
SIN3B-211ENST00000601141 LXNQ9BS40 222 aa23.05■■□□□ 1.28
SIN3B-211ENST00000601141 SEZ6LQ9BYH1 1024 aa23.05■■□□□ 1.28
SIN3B-211ENST00000601141 MROH7Q68CQ1 1323 aa23.04■■□□□ 1.28
SIN3B-211ENST00000601141 SPTLC2O15270 562 aa23.04■■□□□ 1.28
SIN3B-211ENST00000601141 ATP4AP20648 1035 aa23.04■■□□□ 1.28
SIN3B-211ENST00000601141 CTTNQ14247 550 aaKnown RBP23.04■■□□□ 1.28
SIN3B-211ENST00000601141 C1orf53Q5VUE5 145 aa23.04■■□□□ 1.28
SIN3B-211ENST00000601141 HAUS3Q68CZ6 603 aa23.04■■□□□ 1.28
SIN3B-211ENST00000601141 TPH2Q8IWU9 490 aa23.04■■□□□ 1.28
SIN3B-211ENST00000601141 PP2D1A8MPX8 630 aa23.03■■□□□ 1.28
SIN3B-211ENST00000601141 ZNF862O60290 1169 aa23.03■■□□□ 1.28
SIN3B-211ENST00000601141 DKC1O60832 514 aaKnown RBP eCLIP23.03■■□□□ 1.28
SIN3B-211ENST00000601141 OATP04181 439 aa23.03■■□□□ 1.28
SIN3B-211ENST00000601141 CDK7P50613 346 aa23.03■■□□□ 1.28
SIN3B-211ENST00000601141 PPFIA1Q13136 1202 aa23.03■■□□□ 1.28
SIN3B-211ENST00000601141 ATP8B4Q8TF62 1192 aa23.03■■□□□ 1.28
SIN3B-211ENST00000601141 TNPO1Q92973 898 aaKnown RBP23.03■■□□□ 1.28
SIN3B-211ENST00000601141 FAM167AQ96KS9 214 aa23.03■■□□□ 1.28
SIN3B-211ENST00000601141 GTF2IRD1Q9UHL9 959 aa23.03■■□□□ 1.28
SIN3B-211ENST00000601141 FBXO2Q9UK22 296 aaPredicted RBP23.03■■□□□ 1.28
SIN3B-211ENST00000601141 C17orf102A2RUQ5 167 aa23.02■■□□□ 1.28
SIN3B-211ENST00000601141 SLITRK3O94933 977 aa23.02■■□□□ 1.28
SIN3B-211ENST00000601141 CDC25AP30304 524 aa23.02■■□□□ 1.28
SIN3B-211ENST00000601141 GRIN1Q05586 938 aa23.02■■□□□ 1.28
SIN3B-211ENST00000601141 PTPN11Q06124 597 aaPredicted RBP23.02■■□□□ 1.28
SIN3B-211ENST00000601141 SESTD1Q86VW0 696 aa23.02■■□□□ 1.28
SIN3B-211ENST00000601141 KRI1Q8N9T8 703 aaKnown RBP23.02■■□□□ 1.28
SIN3B-211ENST00000601141 SNX29Q8TEQ0 813 aa23.02■■□□□ 1.28
SIN3B-211ENST00000601141 BBXQ8WY36 941 aaPredicted RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms