RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 FAM86B1E9PN63 330 aa17.78■□□□□ 0.44
IRF3-226ENST00000600453 IPO5O00410 1097 aaKnown RBP17.78■□□□□ 0.44
IRF3-226ENST00000600453 AMHP03971 560 aa17.78■□□□□ 0.44
IRF3-226ENST00000600453 FAM86B2P0C5J1 330 aa17.78■□□□□ 0.44
IRF3-226ENST00000600453 MARK3P27448 753 aa17.78■□□□□ 0.44
IRF3-226ENST00000600453 CIITAP33076 1130 aa17.78■□□□□ 0.44
IRF3-226ENST00000600453 PLEKHG4Q58EX7 1191 aa17.78■□□□□ 0.44
IRF3-226ENST00000600453 MIS18BP1Q6P0N0 1132 aa17.78■□□□□ 0.44
IRF3-226ENST00000600453 DBF4BQ8NFT6 615 aa17.78■□□□□ 0.44
IRF3-226ENST00000600453 RAD9AQ99638 391 aa17.78■□□□□ 0.44
IRF3-226ENST00000600453 ZNF577Q9BSK1 485 aa17.78■□□□□ 0.44
IRF3-226ENST00000600453 SLKQ9H2G2 1235 aaPredicted RBP17.78■□□□□ 0.44
IRF3-226ENST00000600453 TUBE1Q9UJT0 475 aa17.78■□□□□ 0.44
IRF3-226ENST00000600453 TRPC6Q9Y210 931 aa17.78■□□□□ 0.44
IRF3-226ENST00000600453 MBLAC1A4D2B0 266 aaPredicted RBP17.77■□□□□ 0.44
IRF3-226ENST00000600453 CA3P07451 260 aa17.77■□□□□ 0.44
IRF3-226ENST00000600453 INSRRP14616 1297 aa17.77■□□□□ 0.44
IRF3-226ENST00000600453 MYOGP15173 224 aa17.77■□□□□ 0.44
IRF3-226ENST00000600453 XBP1P17861 261 aa17.77■□□□□ 0.44
IRF3-226ENST00000600453 ITGB3BPQ13352 177 aaPredicted RBP17.77■□□□□ 0.44
IRF3-226ENST00000600453 MBTPS1Q14703 1052 aa17.77■□□□□ 0.44
IRF3-226ENST00000600453 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.77■□□□□ 0.44
IRF3-226ENST00000600453 VPS54Q9P1Q0 977 aa17.77■□□□□ 0.44
IRF3-226ENST00000600453 GBF1Q92538 1859 aa17.77■□□□□ 0.43
IRF3-226ENST00000600453 IGLV3-22A0A075B6J6 115 aa17.76■□□□□ 0.43
IRF3-226ENST00000600453 IGKV6D-21A0A0A0MT36 114 aa17.76■□□□□ 0.43
IRF3-226ENST00000600453 BACH1O14867 736 aa17.76■□□□□ 0.43
IRF3-226ENST00000600453 GJB5O95377 273 aa17.76■□□□□ 0.43
IRF3-226ENST00000600453 IGFBP4P22692 258 aa17.76■□□□□ 0.43
IRF3-226ENST00000600453 STK3Q13188 491 aa17.76■□□□□ 0.43
IRF3-226ENST00000600453 IER5Q5VY09 327 aa17.76■□□□□ 0.43
IRF3-226ENST00000600453 ZNF746Q6NUN9 644 aaPredicted RBP17.76■□□□□ 0.43
IRF3-226ENST00000600453 ABHD15Q6UXT9 468 aa17.76■□□□□ 0.43
IRF3-226ENST00000600453 FAM43BQ6ZT52 329 aaPredicted RBP17.76■□□□□ 0.43
IRF3-226ENST00000600453 SMAP1Q8IYB5 467 aaPredicted RBP17.76■□□□□ 0.43
IRF3-226ENST00000600453 NME8Q8N427 588 aa17.76■□□□□ 0.43
IRF3-226ENST00000600453 PCYT2Q99447 389 aa17.76■□□□□ 0.43
IRF3-226ENST00000600453 PCDHA4Q9UN74 947 aa17.76■□□□□ 0.43
IRF3-226ENST00000600453 INSL6Q9Y581 213 aa17.76■□□□□ 0.43
IRF3-226ENST00000600453 POTEB3A0JP26 581 aa17.75■□□□□ 0.43
IRF3-226ENST00000600453 DHX15O43143 795 aaKnown RBP17.75■□□□□ 0.43
IRF3-226ENST00000600453 HBP1O60381 514 aa17.75■□□□□ 0.43
IRF3-226ENST00000600453 PPFIA3O75145 1194 aa17.75■□□□□ 0.43
IRF3-226ENST00000600453 CTSHP09668 335 aa17.75■□□□□ 0.43
IRF3-226ENST00000600453 KRT76Q01546 638 aa17.75■□□□□ 0.43
IRF3-226ENST00000600453 PLCB4Q15147 1175 aa17.75■□□□□ 0.43
IRF3-226ENST00000600453 PRR16Q569H4 304 aa17.75■□□□□ 0.43
IRF3-226ENST00000600453 POTEBQ6S5H4 581 aa17.75■□□□□ 0.43
IRF3-226ENST00000600453 ZNF302Q9NR11 478 aa17.75■□□□□ 0.43
IRF3-226ENST00000600453 SQORQ9Y6N5 450 aa17.75■□□□□ 0.43
IRF3-226ENST00000600453 M0QZ92 97 aa17.74■□□□□ 0.43
IRF3-226ENST00000600453 DDX39AO00148 427 aaKnown RBP17.74■□□□□ 0.43
IRF3-226ENST00000600453 DLL1O00548 723 aa17.74■□□□□ 0.43
IRF3-226ENST00000600453 GTPBP6O43824 516 aaPredicted RBP17.74■□□□□ 0.43
IRF3-226ENST00000600453 IGBP1P78318 339 aa17.74■□□□□ 0.43
IRF3-226ENST00000600453 MARCH8Q5T0T0 291 aa17.74■□□□□ 0.43
IRF3-226ENST00000600453 BLIDQ8IZY5 108 aa17.74■□□□□ 0.43
IRF3-226ENST00000600453 USP38Q8NB14 1042 aa17.74■□□□□ 0.43
IRF3-226ENST00000600453 DNAJB3Q8WWF6 145 aa17.74■□□□□ 0.43
IRF3-226ENST00000600453 LARP6Q9BRS8 491 aaKnown RBP17.74■□□□□ 0.43
IRF3-226ENST00000600453 IFIH1Q9BYX4 1025 aaKnown RBP17.74■□□□□ 0.43
IRF3-226ENST00000600453 TSPYL2Q9H2G4 693 aaPredicted RBP17.74■□□□□ 0.43
IRF3-226ENST00000600453 PCDHA2Q9Y5H9 948 aa17.74■□□□□ 0.43
IRF3-226ENST00000600453 PCDHA10Q9Y5I2 948 aa17.74■□□□□ 0.43
IRF3-226ENST00000600453 PFKFB2O60825 505 aa17.73■□□□□ 0.43
IRF3-226ENST00000600453 CCNE2O96020 404 aa17.73■□□□□ 0.43
IRF3-226ENST00000600453 CHRNA1P02708 482 aa17.73■□□□□ 0.43
IRF3-226ENST00000600453 PSAPP07602 524 aa17.73■□□□□ 0.43
IRF3-226ENST00000600453 POU3F3P20264 500 aaPredicted RBP17.73■□□□□ 0.43
IRF3-226ENST00000600453 DEFB103AP81534 67 aa17.73■□□□□ 0.43
IRF3-226ENST00000600453 TAP1Q03518 808 aa17.73■□□□□ 0.43
IRF3-226ENST00000600453 ZNF484Q5JVG2 852 aa17.73■□□□□ 0.43
IRF3-226ENST00000600453 SWSAP1Q6NVH7 229 aa17.73■□□□□ 0.43
IRF3-226ENST00000600453 PDXDC2PQ6P474 469 aa17.73■□□□□ 0.43
IRF3-226ENST00000600453 RUFY4Q6ZNE9 571 aa17.73■□□□□ 0.43
IRF3-226ENST00000600453 DAGLBQ8NCG7 672 aa17.73■□□□□ 0.43
IRF3-226ENST00000600453 RASGRP4Q8TDF6 673 aa17.73■□□□□ 0.43
IRF3-226ENST00000600453 ATP8B4Q8TF62 1192 aa17.73■□□□□ 0.43
IRF3-226ENST00000600453 WASF1Q92558 559 aa17.73■□□□□ 0.43
IRF3-226ENST00000600453 RIT2Q99578 217 aa17.73■□□□□ 0.43
IRF3-226ENST00000600453 COL1A2P08123 1366 aa17.72■□□□□ 0.43
IRF3-226ENST00000600453 SMIM35A0A1B0GVV1 85 aa17.72■□□□□ 0.43
IRF3-226ENST00000600453 SCRN1Q12765 414 aa17.72■□□□□ 0.43
IRF3-226ENST00000600453 CKAP2LQ8IYA6 745 aa17.72■□□□□ 0.43
IRF3-226ENST00000600453 MYOCDQ8IZQ8 938 aa17.72■□□□□ 0.43
IRF3-226ENST00000600453 TBCKQ8TEA7 893 aa17.72■□□□□ 0.43
IRF3-226ENST00000600453 BBXQ8WY36 941 aaPredicted RBP17.72■□□□□ 0.43
IRF3-226ENST00000600453 TOP1MTQ969P6 601 aa17.72■□□□□ 0.43
IRF3-226ENST00000600453 IL17RAQ96F46 866 aa17.72■□□□□ 0.43
IRF3-226ENST00000600453 SAMM50Q9Y512 469 aa17.72■□□□□ 0.43
IRF3-226ENST00000600453 MYH9P35579 1960 aaKnown RBP17.71■□□□□ 0.43
IRF3-226ENST00000600453 ADAMTS3O15072 1205 aa17.71■□□□□ 0.43
IRF3-226ENST00000600453 MRPS6P82932 125 aaKnown RBP17.71■□□□□ 0.43
IRF3-226ENST00000600453 ADGRE1Q14246 886 aa17.71■□□□□ 0.43
IRF3-226ENST00000600453 TCTN1Q2MV58 587 aa17.71■□□□□ 0.43
IRF3-226ENST00000600453 Q4G0T1 1027 aa17.71■□□□□ 0.43
IRF3-226ENST00000600453 MTHFD1LQ6UB35 978 aa17.71■□□□□ 0.43
IRF3-226ENST00000600453 MOXD1Q6UVY6 613 aa17.71■□□□□ 0.43
IRF3-226ENST00000600453 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.71■□□□□ 0.43
IRF3-226ENST00000600453 KRT25Q7Z3Z0 450 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms