RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 CPVLQ9H3G5 476 aa17.54■□□□□ 0.4
SYDE1-204ENST00000600440 ATP6V0A2Q9Y487 856 aa17.54■□□□□ 0.4
SYDE1-204ENST00000600440 TCP11X1B4DZS4 312 aa17.54■□□□□ 0.4
SYDE1-204ENST00000600440 FGGP02679 453 aa17.54■□□□□ 0.4
SYDE1-204ENST00000600440 SESN3P58005 492 aa17.54■□□□□ 0.4
SYDE1-204ENST00000600440 BLMHQ13867 455 aa17.54■□□□□ 0.4
SYDE1-204ENST00000600440 ZNF268Q14587 947 aaPredicted RBP17.54■□□□□ 0.4
SYDE1-204ENST00000600440 SLC18A3Q16572 532 aa17.54■□□□□ 0.4
SYDE1-204ENST00000600440 NAF1Q96HR8 494 aaKnown RBP17.54■□□□□ 0.4
SYDE1-204ENST00000600440 KCNK9Q9NPC2 374 aa17.54■□□□□ 0.4
SYDE1-204ENST00000600440 TRMT112Q9UI30 125 aaKnown RBP17.54■□□□□ 0.4
SYDE1-204ENST00000600440 SSU72P8A0A1W2PR75 194 aa17.53■□□□□ 0.4
SYDE1-204ENST00000600440 KRT13P13646 458 aa17.53■□□□□ 0.4
SYDE1-204ENST00000600440 TXKP42681 527 aa17.53■□□□□ 0.4
SYDE1-204ENST00000600440 SSR1P43307 286 aaKnown RBP17.53■□□□□ 0.4
SYDE1-204ENST00000600440 PAPOLAP51003 745 aaKnown RBP17.53■□□□□ 0.4
SYDE1-204ENST00000600440 POLE2P56282 527 aa17.53■□□□□ 0.4
SYDE1-204ENST00000600440 SLC29A2Q14542 456 aa17.53■□□□□ 0.4
SYDE1-204ENST00000600440 ASIC2Q16515 512 aa17.53■□□□□ 0.4
SYDE1-204ENST00000600440 LONP2Q86WA8 852 aa17.53■□□□□ 0.4
SYDE1-204ENST00000600440 ZMYND12Q9H0C1 365 aa17.53■□□□□ 0.4
SYDE1-204ENST00000600440 ZMYND8Q9ULU4 1186 aaPredicted RBP17.53■□□□□ 0.4
SYDE1-204ENST00000600440 PCDHGC5Q9Y5F6 944 aa17.53■□□□□ 0.4
SYDE1-204ENST00000600440 NFAT5O94916 1531 aa17.53■□□□□ 0.4
SYDE1-204ENST00000600440 GSTA1P08263 222 aa17.53■□□□□ 0.4
SYDE1-204ENST00000600440 ACTN1P12814 892 aa17.53■□□□□ 0.4
SYDE1-204ENST00000600440 FGFR4P22455 802 aa17.53■□□□□ 0.4
SYDE1-204ENST00000600440 TUBP50607 506 aa17.53■□□□□ 0.4
SYDE1-204ENST00000600440 RPS6KA3P51812 740 aa17.53■□□□□ 0.4
SYDE1-204ENST00000600440 ZNF211Q13398 564 aaPredicted RBP17.53■□□□□ 0.4
SYDE1-204ENST00000600440 GIGYF2Q6Y7W6 1299 aaKnown RBP17.53■□□□□ 0.4
SYDE1-204ENST00000600440 CDK5RAP3Q96JB5 506 aa17.53■□□□□ 0.4
SYDE1-204ENST00000600440 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.53■□□□□ 0.42e-6■■■■□ 19.4
SYDE1-204ENST00000600440 PPP1R12CQ9BZL4 782 aa17.53■□□□□ 0.4
SYDE1-204ENST00000600440 ZHX3Q9H4I2 956 aa17.53■□□□□ 0.4
SYDE1-204ENST00000600440 ADAM22Q9P0K1 906 aa17.53■□□□□ 0.4
SYDE1-204ENST00000600440 MYH2Q9UKX2 1941 aa17.53■□□□□ 0.4
SYDE1-204ENST00000600440 IRS4O14654 1257 aaPredicted RBP17.53■□□□□ 0.4
SYDE1-204ENST00000600440 HIP1RO75146 1068 aa17.53■□□□□ 0.4
SYDE1-204ENST00000600440 MYBP10242 640 aa17.53■□□□□ 0.4
SYDE1-204ENST00000600440 RIPK1Q13546 671 aa17.53■□□□□ 0.4
SYDE1-204ENST00000600440 LLGL1Q15334 1064 aa17.53■□□□□ 0.4
SYDE1-204ENST00000600440 KIF6Q6ZMV9 814 aa17.53■□□□□ 0.4
SYDE1-204ENST00000600440 ATXN2LQ8WWM7 1075 aaKnown RBP17.53■□□□□ 0.4
SYDE1-204ENST00000600440 AFF2P51816 1311 aa17.52■□□□□ 0.4
SYDE1-204ENST00000600440 PUM3Q15397 648 aaKnown RBP17.52■□□□□ 0.4
SYDE1-204ENST00000600440 SCFD2Q8WU76 684 aa17.52■□□□□ 0.4
SYDE1-204ENST00000600440 MAGEB6P1A0A0J9YX57 407 aa17.52■□□□□ 0.39
SYDE1-204ENST00000600440 LRRD1A4D1F6 860 aa17.52■□□□□ 0.39
SYDE1-204ENST00000600440 SLC5A1P13866 664 aa17.52■□□□□ 0.39
SYDE1-204ENST00000600440 GNAT2P19087 354 aa17.52■□□□□ 0.39
SYDE1-204ENST00000600440 ITIH4Q14624 930 aa17.52■□□□□ 0.39
SYDE1-204ENST00000600440 PFKFB3Q16875 520 aaPredicted RBP17.52■□□□□ 0.39
SYDE1-204ENST00000600440 FAM47EQ6ZV65 393 aa17.52■□□□□ 0.39
SYDE1-204ENST00000600440 NEK9Q8TD19 979 aa17.52■□□□□ 0.39
SYDE1-204ENST00000600440 ATRNO75882 1429 aa17.51■□□□□ 0.39
SYDE1-204ENST00000600440 A0A1B0GVG6 124 aa17.51■□□□□ 0.39
SYDE1-204ENST00000600440 USP17L12C9JPN9 530 aa17.51■□□□□ 0.39
SYDE1-204ENST00000600440 USP17L21D6R901 530 aa17.51■□□□□ 0.39
SYDE1-204ENST00000600440 PYGLP06737 847 aa17.51■□□□□ 0.39
SYDE1-204ENST00000600440 ARID4AP29374 1257 aaPredicted RBP17.51■□□□□ 0.39
SYDE1-204ENST00000600440 USP11P51784 963 aa17.51■□□□□ 0.39
SYDE1-204ENST00000600440 COPS2P61201 443 aa17.51■□□□□ 0.39
SYDE1-204ENST00000600440 CACNB1Q02641 598 aaPredicted RBP17.51■□□□□ 0.39
SYDE1-204ENST00000600440 SAMD1Q6SPF0 538 aaPredicted RBP17.51■□□□□ 0.39
SYDE1-204ENST00000600440 PIGWQ7Z7B1 504 aa17.51■□□□□ 0.39
SYDE1-204ENST00000600440 TEKT4Q8WW24 435 aa17.51■□□□□ 0.39
SYDE1-204ENST00000600440 ISCA1Q9BUE6 129 aa17.51■□□□□ 0.39
SYDE1-204ENST00000600440 ETNK1Q9HBU6 452 aa17.51■□□□□ 0.39
SYDE1-204ENST00000600440 HOMER3Q9NSC5 361 aa17.51■□□□□ 0.39
SYDE1-204ENST00000600440 NKX1-2Q9UD57 310 aaPredicted RBP17.51■□□□□ 0.39
SYDE1-204ENST00000600440 ASAP2O43150 1006 aa17.51■□□□□ 0.39
SYDE1-204ENST00000600440 RANBP1P43487 201 aa17.51■□□□□ 0.39
SYDE1-204ENST00000600440 PMS2P54278 862 aa17.51■□□□□ 0.39
SYDE1-204ENST00000600440 RAD23BP54727 409 aa17.51■□□□□ 0.39
SYDE1-204ENST00000600440 AMPD3Q01432 767 aa17.51■□□□□ 0.39
SYDE1-204ENST00000600440 PTK2Q05397 1052 aa17.51■□□□□ 0.39
SYDE1-204ENST00000600440 PPP2R5BQ15173 497 aa17.51■□□□□ 0.39
SYDE1-204ENST00000600440 ZBTB38Q8NAP3 1195 aaPredicted RBP17.51■□□□□ 0.39
SYDE1-204ENST00000600440 TLCD1Q96CP7 247 aa17.51■□□□□ 0.39
SYDE1-204ENST00000600440 DDX23Q9BUQ8 820 aaKnown RBP17.51■□□□□ 0.39
SYDE1-204ENST00000600440 LAMB4A4D0S4 1761 aa17.51■□□□□ 0.39
SYDE1-204ENST00000600440 NID2Q14112 1375 aa17.51■□□□□ 0.39
SYDE1-204ENST00000600440 GOLGA6L10A0A0M3HER8 536 aa17.51■□□□□ 0.39
SYDE1-204ENST00000600440 MYMKA6NI61 221 aa17.51■□□□□ 0.39
SYDE1-204ENST00000600440 TSPY2A6NKD2 308 aa17.51■□□□□ 0.39
SYDE1-204ENST00000600440 CALML3P27482 149 aa17.51■□□□□ 0.39
SYDE1-204ENST00000600440 CTSWP56202 376 aa17.51■□□□□ 0.39
SYDE1-204ENST00000600440 CENPPQ6IPU0 288 aa17.51■□□□□ 0.39
SYDE1-204ENST00000600440 SV2BQ7L1I2 683 aa17.51■□□□□ 0.39
SYDE1-204ENST00000600440 TSG101Q99816 390 aa17.51■□□□□ 0.39
SYDE1-204ENST00000600440 CEP72Q9P209 647 aa17.51■□□□□ 0.39
SYDE1-204ENST00000600440 TMEM59LQ9UK28 342 aa17.51■□□□□ 0.39
SYDE1-204ENST00000600440 AKAP11Q9UKA4 1901 aa17.5■□□□□ 0.39
SYDE1-204ENST00000600440 STXBP3O00186 592 aa17.5■□□□□ 0.39
SYDE1-204ENST00000600440 LUC7L3O95232 432 aaKnown RBP17.5■□□□□ 0.39
SYDE1-204ENST00000600440 FBXO25Q8TCJ0 367 aa17.5■□□□□ 0.39
SYDE1-204ENST00000600440 CALML4Q96GE6 196 aa17.5■□□□□ 0.39
SYDE1-204ENST00000600440 SEMA4AQ9H3S1 761 aa17.5■□□□□ 0.39
SYDE1-204ENST00000600440 FBXO3Q9UK99 471 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms