RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 KCNJ12Q14500 433 aa10.68□□□□□ -0.7
NFKB1-212ENST00000600343 R3HDM1Q15032 1099 aaKnown RBP10.68□□□□□ -0.7
NFKB1-212ENST00000600343 INAQ16352 499 aa10.68□□□□□ -0.7
NFKB1-212ENST00000600343 GSTA3Q16772 222 aa10.68□□□□□ -0.7
NFKB1-212ENST00000600343 ZNF394Q53GI3 561 aa10.68□□□□□ -0.7
NFKB1-212ENST00000600343 WASHC2DQ5SRD0 308 aa10.68□□□□□ -0.7
NFKB1-212ENST00000600343 PEX5LQ8IYB4 626 aa10.68□□□□□ -0.7
NFKB1-212ENST00000600343 FAM133AQ8N9E0 248 aa10.68□□□□□ -0.7
NFKB1-212ENST00000600343 HELBQ8NG08 1087 aaPredicted RBP10.68□□□□□ -0.7
NFKB1-212ENST00000600343 FBXO41Q8TF61 875 aa10.68□□□□□ -0.7
NFKB1-212ENST00000600343 BHMTQ93088 406 aa10.68□□□□□ -0.7
NFKB1-212ENST00000600343 NMD3Q96D46 503 aaKnown RBP10.68□□□□□ -0.7
NFKB1-212ENST00000600343 MAP3K14Q99558 947 aa10.68□□□□□ -0.7
NFKB1-212ENST00000600343 IFIH1Q9BYX4 1025 aaKnown RBP10.68□□□□□ -0.7
NFKB1-212ENST00000600343 CAPN11Q9UMQ6 739 aa10.68□□□□□ -0.7
NFKB1-212ENST00000600343 ENTPD5O75356 428 aa10.68□□□□□ -0.7
NFKB1-212ENST00000600343 ERVK-9P63128 1117 aa10.68□□□□□ -0.7
NFKB1-212ENST00000600343 LMNB2Q03252 620 aa10.68□□□□□ -0.7
NFKB1-212ENST00000600343 MARK2Q7KZI7 788 aaKnown RBP10.68□□□□□ -0.7
NFKB1-212ENST00000600343 RBM46Q8TBY0 533 aaKnown RBP10.68□□□□□ -0.7
NFKB1-212ENST00000600343 NAP1L3Q99457 506 aaPredicted RBP10.68□□□□□ -0.7
NFKB1-212ENST00000600343 AGXT2Q9BYV1 514 aa10.68□□□□□ -0.7
NFKB1-212ENST00000600343 CCDC8Q9H0W5 538 aaPredicted RBP10.68□□□□□ -0.7
NFKB1-212ENST00000600343 FGFR1OP2Q9NVK5 253 aa10.68□□□□□ -0.7
NFKB1-212ENST00000600343 TSC22D4Q9Y3Q8 395 aa10.68□□□□□ -0.7
NFKB1-212ENST00000600343 STK24Q9Y6E0 443 aa10.68□□□□□ -0.7
NFKB1-212ENST00000600343 GSTT2P0CG29 244 aa10.68□□□□□ -0.7
NFKB1-212ENST00000600343 GSTT2BP0CG30 244 aa10.68□□□□□ -0.7
NFKB1-212ENST00000600343 CDK7P50613 346 aa10.68□□□□□ -0.7
NFKB1-212ENST00000600343 CDK17Q00537 523 aa10.68□□□□□ -0.7
NFKB1-212ENST00000600343 EXOSC10Q01780 885 aaKnown RBP10.68□□□□□ -0.7
NFKB1-212ENST00000600343 KRT72Q14CN4 511 aa10.68□□□□□ -0.7
NFKB1-212ENST00000600343 MEA1Q16626 185 aa10.68□□□□□ -0.7
NFKB1-212ENST00000600343 POTEEQ6S8J3 1075 aa10.68□□□□□ -0.7
NFKB1-212ENST00000600343 WDR75Q8IWA0 830 aaKnown RBP10.68□□□□□ -0.7
NFKB1-212ENST00000600343 C14orf93Q9H972 538 aaKnown RBP10.68□□□□□ -0.7
NFKB1-212ENST00000600343 HESX1Q9UBX0 185 aa10.68□□□□□ -0.7
NFKB1-212ENST00000600343 TMEM110-MUSTN1A8MSY1 372 aa10.68□□□□□ -0.7
NFKB1-212ENST00000600343 AFPP02771 609 aaKnown RBP10.68□□□□□ -0.7
NFKB1-212ENST00000600343 AFMP43652 599 aa10.68□□□□□ -0.7
NFKB1-212ENST00000600343 MMP13P45452 471 aa10.68□□□□□ -0.7
NFKB1-212ENST00000600343 PIP4K2AP48426 406 aaPredicted RBP10.68□□□□□ -0.7
NFKB1-212ENST00000600343 RNASE9P60153 205 aaKnown RBP10.68□□□□□ -0.7
NFKB1-212ENST00000600343 TCP11X2Q5H9J9 407 aa10.68□□□□□ -0.7
NFKB1-212ENST00000600343 KRT26Q7Z3Y9 468 aa10.68□□□□□ -0.7
NFKB1-212ENST00000600343 DDX42Q86XP3 938 aaKnown RBP eCLIP10.68□□□□□ -0.7
NFKB1-212ENST00000600343 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.68□□□□□ -0.7
NFKB1-212ENST00000600343 CCDC42Q96M95 316 aa10.68□□□□□ -0.7
NFKB1-212ENST00000600343 MYH7BA7E2Y1 1941 aa10.68□□□□□ -0.7
NFKB1-212ENST00000600343 WDR46O15213 610 aaKnown RBP10.67□□□□□ -0.7
NFKB1-212ENST00000600343 MYCLP1P12525 358 aaPredicted RBP10.67□□□□□ -0.7
NFKB1-212ENST00000600343 PMS2P54278 862 aa10.67□□□□□ -0.7
NFKB1-212ENST00000600343 SLC39A6Q13433 755 aa10.67□□□□□ -0.7
NFKB1-212ENST00000600343 DAB2IPQ5VWQ8 1189 aa10.67□□□□□ -0.7
NFKB1-212ENST00000600343 FAAH2Q6GMR7 532 aa10.67□□□□□ -0.7
NFKB1-212ENST00000600343 USP33Q8TEY7 942 aa10.67□□□□□ -0.7
NFKB1-212ENST00000600343 IRGQQ8WZA9 623 aa10.67□□□□□ -0.7
NFKB1-212ENST00000600343 CENPOQ9BU64 300 aa10.67□□□□□ -0.7
NFKB1-212ENST00000600343 TLR10Q9BXR5 811 aa10.67□□□□□ -0.7
NFKB1-212ENST00000600343 CCDC134Q9H6E4 229 aa10.67□□□□□ -0.7
NFKB1-212ENST00000600343 USP20Q9Y2K6 914 aa10.67□□□□□ -0.7
NFKB1-212ENST00000600343 MAP3K19Q56UN5 1328 aa10.67□□□□□ -0.7
NFKB1-212ENST00000600343 MAP3K15Q6ZN16 1313 aa10.67□□□□□ -0.7
NFKB1-212ENST00000600343 ZFYP08048 801 aaPredicted RBP10.67□□□□□ -0.7
NFKB1-212ENST00000600343 ECHS1P30084 290 aa10.67□□□□□ -0.7
NFKB1-212ENST00000600343 NSUN2Q08J23 767 aaKnown RBP eCLIP10.67□□□□□ -0.7
NFKB1-212ENST00000600343 PUS10Q3MIT2 529 aaKnown RBP10.67□□□□□ -0.7
NFKB1-212ENST00000600343 PACS1Q6VY07 963 aa10.67□□□□□ -0.7
NFKB1-212ENST00000600343 TRIM67Q6ZTA4 783 aa10.67□□□□□ -0.7
NFKB1-212ENST00000600343 ST13P4Q8IZP2 240 aaPredicted RBP10.67□□□□□ -0.7
NFKB1-212ENST00000600343 STK11IPQ8N1F8 1099 aa10.67□□□□□ -0.7
NFKB1-212ENST00000600343 EIF1ADQ8N9N8 165 aaKnown RBP10.67□□□□□ -0.7
NFKB1-212ENST00000600343 DDX12PQ92771 950 aa10.67□□□□□ -0.7
NFKB1-212ENST00000600343 MAML3Q96JK9 1138 aa10.67□□□□□ -0.7
NFKB1-212ENST00000600343 DRC3Q9H069 523 aa10.67□□□□□ -0.7
NFKB1-212ENST00000600343 LRMDAQ9H2I8 198 aa10.67□□□□□ -0.7
NFKB1-212ENST00000600343 LRRC4CQ9HCJ2 640 aa10.67□□□□□ -0.7
NFKB1-212ENST00000600343 IL1RAPL1Q9NZN1 696 aa10.67□□□□□ -0.7
NFKB1-212ENST00000600343 COL15A1P39059 1388 aa10.67□□□□□ -0.7
NFKB1-212ENST00000600343 IFT172Q9UG01 1749 aa10.67□□□□□ -0.7
NFKB1-212ENST00000600343 PRPF3O43395 683 aaKnown RBP10.67□□□□□ -0.7
NFKB1-212ENST00000600343 PDE5AO76074 875 aa10.67□□□□□ -0.7
NFKB1-212ENST00000600343 SPATA20Q8TB22 786 aa10.67□□□□□ -0.7
NFKB1-212ENST00000600343 CASP10Q92851 521 aa10.67□□□□□ -0.7
NFKB1-212ENST00000600343 DPH5Q9H2P9 285 aa10.67□□□□□ -0.7
NFKB1-212ENST00000600343 TBCCD1Q9NVR7 557 aa10.67□□□□□ -0.7
NFKB1-212ENST00000600343 TLDC2A0PJX2 215 aa10.66□□□□□ -0.7
NFKB1-212ENST00000600343 PPP1R3GB7ZBB8 358 aa10.66□□□□□ -0.7
NFKB1-212ENST00000600343 SPTLC1O15269 473 aa10.66□□□□□ -0.7
NFKB1-212ENST00000600343 MAP3K7O43318 606 aa10.66□□□□□ -0.7
NFKB1-212ENST00000600343 GJB6O95452 261 aa10.66□□□□□ -0.7
NFKB1-212ENST00000600343 EIF3BP55884 814 aaKnown RBP10.66□□□□□ -0.7
NFKB1-212ENST00000600343 LRRC8BQ6P9F7 803 aa10.66□□□□□ -0.7
NFKB1-212ENST00000600343 HS2ST1Q7LGA3 356 aa10.66□□□□□ -0.7
NFKB1-212ENST00000600343 VSIG1Q86XK7 387 aa10.66□□□□□ -0.7
NFKB1-212ENST00000600343 MB21D1Q8N884 522 aa10.66□□□□□ -0.7
NFKB1-212ENST00000600343 SH3TC2Q8TF17 1288 aa10.66□□□□□ -0.7
NFKB1-212ENST00000600343 PASKQ96RG2 1323 aa10.66□□□□□ -0.7
NFKB1-212ENST00000600343 KIF20BQ96Q89 1820 aa10.66□□□□□ -0.7
NFKB1-212ENST00000600343 N4BP2Q86UW6 1770 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms