RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 TRAF3IP3Q9Y228 551 aa23.87■■□□□ 1.41
GRAMD1A-212ENST00000600231 ZSCAN20P17040 1043 aaPredicted RBP23.86■■□□□ 1.41
GRAMD1A-212ENST00000600231 AMPD2Q01433 879 aa23.86■■□□□ 1.41
GRAMD1A-212ENST00000600231 TNIP1Q15025 636 aa23.86■■□□□ 1.41
GRAMD1A-212ENST00000600231 CACNA2D4Q7Z3S7 1137 aa23.86■■□□□ 1.41
GRAMD1A-212ENST00000600231 CEP112Q8N8E3 955 aa23.86■■□□□ 1.41
GRAMD1A-212ENST00000600231 ENC1O14682 589 aa23.86■■□□□ 1.41
GRAMD1A-212ENST00000600231 NOL4O94818 638 aa23.86■■□□□ 1.41
GRAMD1A-212ENST00000600231 PRELPP51888 382 aa23.86■■□□□ 1.41
GRAMD1A-212ENST00000600231 GLIPR1L2Q4G1C9 344 aa23.86■■□□□ 1.41
GRAMD1A-212ENST00000600231 KCTD17Q8N5Z5 321 aa23.86■■□□□ 1.41
GRAMD1A-212ENST00000600231 PRPF38AQ8NAV1 312 aaKnown RBP23.86■■□□□ 1.41
GRAMD1A-212ENST00000600231 NLRC4Q9NPP4 1024 aa23.86■■□□□ 1.41
GRAMD1A-212ENST00000600231 PPP1R1BQ9UD71 204 aaPredicted RBP23.86■■□□□ 1.41
GRAMD1A-212ENST00000600231 TBCAO75347 108 aaKnown RBP23.85■■□□□ 1.41
GRAMD1A-212ENST00000600231 EIF4A3P38919 411 aaKnown RBP23.85■■□□□ 1.41
GRAMD1A-212ENST00000600231 ZNF280AP59817 542 aaPredicted RBP23.85■■□□□ 1.41
GRAMD1A-212ENST00000600231 EDEM3Q9BZQ6 932 aa23.85■■□□□ 1.41
GRAMD1A-212ENST00000600231 DEFB129Q9H1M3 183 aa23.85■■□□□ 1.41
GRAMD1A-212ENST00000600231 ARGLU1Q9NWB6 273 aaPredicted RBP23.85■■□□□ 1.41
GRAMD1A-212ENST00000600231 COL20A1Q9P218 1284 aa23.85■■□□□ 1.41
GRAMD1A-212ENST00000600231 FER1L6Q2WGJ9 1857 aa23.85■■□□□ 1.41
GRAMD1A-212ENST00000600231 NFIBO00712 420 aa23.85■■□□□ 1.41
GRAMD1A-212ENST00000600231 HSD17B4P51659 736 aa23.85■■□□□ 1.41
GRAMD1A-212ENST00000600231 SPA17Q15506 151 aa23.85■■□□□ 1.41
GRAMD1A-212ENST00000600231 PDXDC1Q6P996 788 aa23.85■■□□□ 1.41
GRAMD1A-212ENST00000600231 UNC45AQ9H3U1 944 aa23.85■■□□□ 1.41
GRAMD1A-212ENST00000600231 WRAP73Q9P2S5 460 aaPredicted RBP23.85■■□□□ 1.41
GRAMD1A-212ENST00000600231 MYO6Q9UM54 1294 aa23.85■■□□□ 1.41
GRAMD1A-212ENST00000600231 ASTN2O75129 1339 aaPredicted RBP23.85■■□□□ 1.41
GRAMD1A-212ENST00000600231 ATAD5Q96QE3 1844 aa23.85■■□□□ 1.41
GRAMD1A-212ENST00000600231 KIF11P52732 1056 aa23.84■■□□□ 1.41
GRAMD1A-212ENST00000600231 VAV2P52735 878 aa23.84■■□□□ 1.41
GRAMD1A-212ENST00000600231 KCNA1Q09470 495 aa23.84■■□□□ 1.41
GRAMD1A-212ENST00000600231 TNFAIP1Q13829 316 aa23.84■■□□□ 1.41
GRAMD1A-212ENST00000600231 CPXCR1Q8N123 301 aa23.84■■□□□ 1.41
GRAMD1A-212ENST00000600231 HOOK2Q96ED9 719 aa23.84■■□□□ 1.41
GRAMD1A-212ENST00000600231 FAM184BQ9ULE4 1060 aa23.84■■□□□ 1.41
GRAMD1A-212ENST00000600231 GCNT3O95395 438 aa23.84■■□□□ 1.41
GRAMD1A-212ENST00000600231 APBA1Q02410 837 aa23.84■■□□□ 1.41
GRAMD1A-212ENST00000600231 C1orf186Q6ZWK4 172 aa23.84■■□□□ 1.41
GRAMD1A-212ENST00000600231 SAMD7Q7Z3H4 446 aa23.84■■□□□ 1.41
GRAMD1A-212ENST00000600231 PARD6BQ9BYG5 372 aa23.84■■□□□ 1.41
GRAMD1A-212ENST00000600231 IPO5O00410 1097 aaKnown RBP23.83■■□□□ 1.41
GRAMD1A-212ENST00000600231 PDXKO00764 312 aa23.83■■□□□ 1.41
GRAMD1A-212ENST00000600231 WDR46O15213 610 aaKnown RBP23.83■■□□□ 1.41
GRAMD1A-212ENST00000600231 ITGB5P18084 799 aa23.83■■□□□ 1.41
GRAMD1A-212ENST00000600231 SETQ01105 290 aaPredicted RBP23.83■■□□□ 1.41
GRAMD1A-212ENST00000600231 KIF5AQ12840 1032 aa23.83■■□□□ 1.41
GRAMD1A-212ENST00000600231 CLEC4DQ8WXI8 215 aa23.83■■□□□ 1.41
GRAMD1A-212ENST00000600231 MXRA8Q9BRK3 442 aa23.83■■□□□ 1.41
GRAMD1A-212ENST00000600231 LSM14BQ9BX40 385 aaKnown RBP23.83■■□□□ 1.41
GRAMD1A-212ENST00000600231 DEF6Q9H4E7 631 aa23.83■■□□□ 1.41
GRAMD1A-212ENST00000600231 CEP72Q9P209 647 aa23.83■■□□□ 1.41
GRAMD1A-212ENST00000600231 HDAC6Q9UBN7 1215 aa23.83■■□□□ 1.41
GRAMD1A-212ENST00000600231 KCNH2Q12809 1159 aa23.83■■□□□ 1.41
GRAMD1A-212ENST00000600231 BMT2Q1RMZ1 405 aa23.83■■□□□ 1.41
GRAMD1A-212ENST00000600231 LPAR1Q92633 364 aa23.83■■□□□ 1.41
GRAMD1A-212ENST00000600231 WDR11Q9BZH6 1224 aa23.83■■□□□ 1.41
GRAMD1A-212ENST00000600231 KIAA1683Q9H0B3 1180 aa23.83■■□□□ 1.41
GRAMD1A-212ENST00000600231 OLFML3Q9NRN5 406 aa23.83■■□□□ 1.41
GRAMD1A-212ENST00000600231 MACROD2A1Z1Q3 448 aa23.82■■□□□ 1.4
GRAMD1A-212ENST00000600231 AKR1B10O60218 316 aa23.82■■□□□ 1.4
GRAMD1A-212ENST00000600231 ATP1A1P05023 1023 aaKnown RBP23.82■■□□□ 1.4
GRAMD1A-212ENST00000600231 WHAMMP3Q1A5X7 153 aa23.82■■□□□ 1.4
GRAMD1A-212ENST00000600231 B3GNT9Q6UX72 402 aa23.82■■□□□ 1.4
GRAMD1A-212ENST00000600231 EHBP1Q8NDI1 1231 aa23.82■■□□□ 1.4
GRAMD1A-212ENST00000600231 PURBQ96QR8 312 aaKnown RBP23.82■■□□□ 1.4
GRAMD1A-212ENST00000600231 IFIH1Q9BYX4 1025 aaKnown RBP23.82■■□□□ 1.4
GRAMD1A-212ENST00000600231 PCDHA13Q9Y5I0 950 aa23.82■■□□□ 1.4
GRAMD1A-212ENST00000600231 POLR2FP61218 127 aaKnown RBP23.82■■□□□ 1.4
GRAMD1A-212ENST00000600231 HGSNATQ68CP4 663 aa23.82■■□□□ 1.4
GRAMD1A-212ENST00000600231 TMCO3Q6UWJ1 677 aa23.82■■□□□ 1.4
GRAMD1A-212ENST00000600231 TRAPPC11Q7Z392 1133 aa23.82■■□□□ 1.4
GRAMD1A-212ENST00000600231 IL31RAQ8NI17 732 aa23.82■■□□□ 1.4
GRAMD1A-212ENST00000600231 TEKT3Q9BXF9 490 aa23.82■■□□□ 1.4
GRAMD1A-212ENST00000600231 ASTN1O14525 1302 aa23.81■■□□□ 1.4
GRAMD1A-212ENST00000600231 CALUO43852 315 aaPredicted RBP23.81■■□□□ 1.4
GRAMD1A-212ENST00000600231 FAM13AO94988 1023 aa23.81■■□□□ 1.4
GRAMD1A-212ENST00000600231 LCA5LO95447 670 aa23.81■■□□□ 1.4
GRAMD1A-212ENST00000600231 MICALL2Q8IY33 904 aa23.81■■□□□ 1.4
GRAMD1A-212ENST00000600231 RAVER2Q9HCJ3 691 aaKnown RBP23.81■■□□□ 1.4
GRAMD1A-212ENST00000600231 TYW1Q9NV66 732 aaKnown RBP23.81■■□□□ 1.4
GRAMD1A-212ENST00000600231 ARMCX3Q9UH62 379 aaPredicted RBP23.81■■□□□ 1.4
GRAMD1A-212ENST00000600231 DDX39AO00148 427 aaKnown RBP23.81■■□□□ 1.4
GRAMD1A-212ENST00000600231 AKAP3O75969 853 aa23.81■■□□□ 1.4
GRAMD1A-212ENST00000600231 ZRANB2O95218 330 aaKnown RBP eCLIP23.81■■□□□ 1.46e-7■■■■■ 35.3
GRAMD1A-212ENST00000600231 ALAS1P13196 640 aa23.81■■□□□ 1.4
GRAMD1A-212ENST00000600231 GAP43P17677 238 aa23.81■■□□□ 1.4
GRAMD1A-212ENST00000600231 EPHA7Q15375 998 aa23.81■■□□□ 1.4
GRAMD1A-212ENST00000600231 TBC1D10BQ4KMP7 808 aaPredicted RBP23.81■■□□□ 1.4
GRAMD1A-212ENST00000600231 ARHGAP27Q6ZUM4 889 aa23.81■■□□□ 1.4
GRAMD1A-212ENST00000600231 FRMD5Q7Z6J6 570 aa23.81■■□□□ 1.4
GRAMD1A-212ENST00000600231 MYCT1Q8N699 235 aa23.81■■□□□ 1.4
GRAMD1A-212ENST00000600231 NACC1Q96RE7 527 aa23.81■■□□□ 1.4
GRAMD1A-212ENST00000600231 HOMER2Q9NSB8 354 aa23.81■■□□□ 1.4
GRAMD1A-212ENST00000600231 FAM53CQ9NYF3 392 aa23.81■■□□□ 1.4
GRAMD1A-212ENST00000600231 PKD2L1Q9P0L9 805 aa23.81■■□□□ 1.4
GRAMD1A-212ENST00000600231 RBBP6Q7Z6E9 1792 aaKnown RBP23.81■■□□□ 1.4
GRAMD1A-212ENST00000600231 CTNND1O60716 968 aaKnown RBP23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms