RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 MKNK2Q9HBH9 465 aa12.12□□□□□ -0.47
SMG9-207ENST00000598860 TOMM22Q9NS69 142 aa12.12□□□□□ -0.47
SMG9-207ENST00000598860 INPP5FQ9Y2H2 1132 aa12.12□□□□□ -0.47
SMG9-207ENST00000598860 PLIN4Q96Q06 1357 aa12.12□□□□□ -0.47
SMG9-207ENST00000598860 NEDD4P46934 1319 aa12.11□□□□□ -0.47
SMG9-207ENST00000598860 CXCL11O14625 94 aa12.11□□□□□ -0.47
SMG9-207ENST00000598860 MCM5P33992 734 aa12.11□□□□□ -0.47
SMG9-207ENST00000598860 CDK8P49336 464 aa12.11□□□□□ -0.47
SMG9-207ENST00000598860 CRHR2Q13324 411 aa12.11□□□□□ -0.47
SMG9-207ENST00000598860 CCDC85BQ15834 202 aaPredicted RBP12.11□□□□□ -0.47
SMG9-207ENST00000598860 CCDC178Q5BJE1 867 aa12.11□□□□□ -0.47
SMG9-207ENST00000598860 STOX1Q6ZVD7 989 aa12.11□□□□□ -0.47
SMG9-207ENST00000598860 ZNF444Q8N0Y2 327 aaPredicted RBP12.11□□□□□ -0.47
SMG9-207ENST00000598860 TMEM102Q8N9M5 508 aaPredicted RBP12.11□□□□□ -0.47
SMG9-207ENST00000598860 POP1Q99575 1024 aaKnown RBP12.11□□□□□ -0.47
SMG9-207ENST00000598860 BHLHE41Q9C0J9 482 aaPredicted RBP12.11□□□□□ -0.47
SMG9-207ENST00000598860 GINM1Q9NU53 330 aa12.11□□□□□ -0.47
SMG9-207ENST00000598860 CYP46A1Q9Y6A2 500 aa12.11□□□□□ -0.47
SMG9-207ENST00000598860 ZHX2Q9Y6X8 837 aa12.11□□□□□ -0.47
SMG9-207ENST00000598860 MYH6P13533 1939 aa12.11□□□□□ -0.47
SMG9-207ENST00000598860 PHIPQ8WWQ0 1821 aa12.11□□□□□ -0.47
SMG9-207ENST00000598860 PTPRFP10586 1907 aa12.1□□□□□ -0.47
SMG9-207ENST00000598860 SPDYE3A6NKU9 549 aa12.1□□□□□ -0.47
SMG9-207ENST00000598860 METTL12A8MUP2 240 aa12.1□□□□□ -0.47
SMG9-207ENST00000598860 BTBD19C9JJ37 291 aa12.1□□□□□ -0.47
SMG9-207ENST00000598860 PTPRAP18433 802 aa12.1□□□□□ -0.47
SMG9-207ENST00000598860 CASTP20810 708 aaKnown RBP12.1□□□□□ -0.47
SMG9-207ENST00000598860 GSK3AP49840 483 aa12.1□□□□□ -0.47
SMG9-207ENST00000598860 SART3Q15020 963 aaKnown RBP12.1□□□□□ -0.47
SMG9-207ENST00000598860 PKN2Q16513 984 aaKnown RBP12.1□□□□□ -0.47
SMG9-207ENST00000598860 SLC4A8Q2Y0W8 1093 aa12.1□□□□□ -0.47
SMG9-207ENST00000598860 ADCK5Q3MIX3 580 aa12.1□□□□□ -0.47
SMG9-207ENST00000598860 TATDN1Q6P1N9 297 aa12.1□□□□□ -0.47
SMG9-207ENST00000598860 ADAMTSL4Q6UY14 1074 aa12.1□□□□□ -0.47
SMG9-207ENST00000598860 RUFY3Q7L099 469 aa12.1□□□□□ -0.47
SMG9-207ENST00000598860 IQCA1Q86XH1 822 aa12.1□□□□□ -0.47
SMG9-207ENST00000598860 MB21D2Q8IYB1 491 aaPredicted RBP12.1□□□□□ -0.47
SMG9-207ENST00000598860 FAM43AQ8N2R8 423 aa12.1□□□□□ -0.47
SMG9-207ENST00000598860 IL22RA1Q8N6P7 574 aa12.1□□□□□ -0.47
SMG9-207ENST00000598860 UBXN4Q92575 508 aa12.1□□□□□ -0.47
SMG9-207ENST00000598860 DYNLL2Q96FJ2 89 aa12.1□□□□□ -0.47
SMG9-207ENST00000598860 TANGO6Q9C0B7 1094 aa12.1□□□□□ -0.47
SMG9-207ENST00000598860 ZCCHC17Q9NP64 241 aaKnown RBP12.1□□□□□ -0.47
SMG9-207ENST00000598860 KBTBD4Q9NVX7 518 aa12.1□□□□□ -0.47
SMG9-207ENST00000598860 ERICH2A1L162 156 aa12.09□□□□□ -0.47
SMG9-207ENST00000598860 TSPY2A6NKD2 308 aa12.09□□□□□ -0.47
SMG9-207ENST00000598860 CCDC85CA6NKD9 419 aa12.09□□□□□ -0.47
SMG9-207ENST00000598860 B4E1Z4 1266 aa12.09□□□□□ -0.47
SMG9-207ENST00000598860 FAM229AH3BQW9 127 aa12.09□□□□□ -0.47
SMG9-207ENST00000598860 RANBP6O60518 1105 aaKnown RBP12.09□□□□□ -0.47
SMG9-207ENST00000598860 FBXO24O75426 580 aa12.09□□□□□ -0.47
SMG9-207ENST00000598860 TSPY3P0CV98 308 aa12.09□□□□□ -0.47
SMG9-207ENST00000598860 TSPY8P0CW00 308 aa12.09□□□□□ -0.47
SMG9-207ENST00000598860 RPS6KB1P23443 525 aa12.09□□□□□ -0.47
SMG9-207ENST00000598860 ITPKAP23677 461 aa12.09□□□□□ -0.47
SMG9-207ENST00000598860 SHMT1P34896 483 aa12.09□□□□□ -0.47
SMG9-207ENST00000598860 SPRED3Q2MJR0 410 aa12.09□□□□□ -0.47
SMG9-207ENST00000598860 RRP12Q5JTH9 1297 aaKnown RBP12.09□□□□□ -0.47
SMG9-207ENST00000598860 SLC44A5Q8NCS7 719 aa12.09□□□□□ -0.47
SMG9-207ENST00000598860 NXPE3Q969Y0 559 aa12.09□□□□□ -0.47
SMG9-207ENST00000598860 TMEM87BQ96K49 555 aa12.09□□□□□ -0.47
SMG9-207ENST00000598860 KIF2CQ99661 725 aa12.09□□□□□ -0.47
SMG9-207ENST00000598860 RSRP1Q9BUV0 290 aa12.09□□□□□ -0.47
SMG9-207ENST00000598860 DNAJC18Q9H819 358 aa12.09□□□□□ -0.47
SMG9-207ENST00000598860 AFG3L2Q9Y4W6 797 aa12.09□□□□□ -0.47
SMG9-207ENST00000598860 TAF6LQ9Y6J9 622 aa12.09□□□□□ -0.47
SMG9-207ENST00000598860 PDE2AO00408 941 aaPredicted RBP12.08□□□□□ -0.48
SMG9-207ENST00000598860 PRDM1O75626 825 aa12.08□□□□□ -0.48
SMG9-207ENST00000598860 CAP2P40123 477 aa12.08□□□□□ -0.48
SMG9-207ENST00000598860 MCM2P49736 904 aa12.08□□□□□ -0.48
SMG9-207ENST00000598860 SP3Q02447 781 aa12.08□□□□□ -0.48
SMG9-207ENST00000598860 ANKRD1Q15327 319 aa12.08□□□□□ -0.48
SMG9-207ENST00000598860 CERKLQ49MI3 558 aaPredicted RBP12.08□□□□□ -0.48
SMG9-207ENST00000598860 FASTKD5Q7L8L6 764 aaKnown RBP12.08□□□□□ -0.48
SMG9-207ENST00000598860 ANKRD23Q86SG2 305 aa12.08□□□□□ -0.48
SMG9-207ENST00000598860 STK11IPQ8N1F8 1099 aa12.08□□□□□ -0.48
SMG9-207ENST00000598860 FBXL16Q8N461 479 aa12.08□□□□□ -0.48
SMG9-207ENST00000598860 ERO1AQ96HE7 468 aa12.08□□□□□ -0.48
SMG9-207ENST00000598860 TRIM56Q9BRZ2 755 aaKnown RBP12.08□□□□□ -0.48
SMG9-207ENST00000598860 UBAC1Q9BSL1 405 aa12.08□□□□□ -0.48
SMG9-207ENST00000598860 ALDH8A1Q9H2A2 487 aaPredicted RBP12.08□□□□□ -0.48
SMG9-207ENST00000598860 ZFYVE1Q9HBF4 777 aa12.08□□□□□ -0.48
SMG9-207ENST00000598860 CABP5Q9NP86 173 aa12.08□□□□□ -0.48
SMG9-207ENST00000598860 TCP11L1Q9NUJ3 509 aa12.08□□□□□ -0.48
SMG9-207ENST00000598860 SMIM22K7EJ46 135 aa12.07□□□□□ -0.48
SMG9-207ENST00000598860 PDHXO00330 501 aa12.07□□□□□ -0.48
SMG9-207ENST00000598860 PRC1O43663 620 aa12.07□□□□□ -0.48
SMG9-207ENST00000598860 NEK4P51957 841 aa12.07□□□□□ -0.48
SMG9-207ENST00000598860 TFAP4Q01664 338 aa12.07□□□□□ -0.48
SMG9-207ENST00000598860 EXOSC10Q01780 885 aaKnown RBP12.07□□□□□ -0.48
SMG9-207ENST00000598860 ARHGEF6Q15052 776 aa12.07□□□□□ -0.48
SMG9-207ENST00000598860 TMEM179Q6ZVK1 233 aa12.07□□□□□ -0.48
SMG9-207ENST00000598860 SV2BQ7L1I2 683 aa12.07□□□□□ -0.48
SMG9-207ENST00000598860 TMTC2Q8N394 836 aa12.07□□□□□ -0.48
SMG9-207ENST00000598860 UPF3BQ9BZI7 483 aaKnown RBP12.07□□□□□ -0.48
SMG9-207ENST00000598860 PDRG1Q9NUG6 133 aa12.07□□□□□ -0.48
SMG9-207ENST00000598860 ZSWIM5Q9P217 1185 aa12.07□□□□□ -0.48
SMG9-207ENST00000598860 PRKAG2Q9UGJ0 569 aa12.07□□□□□ -0.48
SMG9-207ENST00000598860 TACC3Q9Y6A5 838 aa12.07□□□□□ -0.48
SMG9-207ENST00000598860 A0A096LPE4 126 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms