RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 TRIM22Q8IYM9 498 aa26.19■■□□□ 1.78
SSBP4-205ENST00000598159 NCOA5Q9HCD5 579 aaKnown RBP26.19■■□□□ 1.78
SSBP4-205ENST00000598159 TUBE1Q9UJT0 475 aa26.19■■□□□ 1.78
SSBP4-205ENST00000598159 PTPRSQ13332 1948 aa26.19■■□□□ 1.78
SSBP4-205ENST00000598159 AMHP03971 560 aa26.18■■□□□ 1.78
SSBP4-205ENST00000598159 RPLP2P05387 115 aaKnown RBP26.18■■□□□ 1.78
SSBP4-205ENST00000598159 SLC26A2P50443 739 aa26.18■■□□□ 1.78
SSBP4-205ENST00000598159 MARCH8Q5T0T0 291 aa26.18■■□□□ 1.78
SSBP4-205ENST00000598159 PPM1EQ8WY54 764 aa26.18■■□□□ 1.78
SSBP4-205ENST00000598159 PDRG1Q9NUG6 133 aa26.18■■□□□ 1.78
SSBP4-205ENST00000598159 IGLV3-22A0A075B6J6 115 aa26.17■■□□□ 1.78
SSBP4-205ENST00000598159 CPLX1O14810 134 aa26.17■■□□□ 1.78
SSBP4-205ENST00000598159 ADAMTS3O15072 1205 aa26.17■■□□□ 1.78
SSBP4-205ENST00000598159 PPFIA3O75145 1194 aa26.17■■□□□ 1.78
SSBP4-205ENST00000598159 INSRRP14616 1297 aa26.17■■□□□ 1.78
SSBP4-205ENST00000598159 POU3F3P20264 500 aaPredicted RBP26.17■■□□□ 1.78
SSBP4-205ENST00000598159 MKRN4PQ13434 485 aaPredicted RBP26.17■■□□□ 1.78
SSBP4-205ENST00000598159 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.17■■□□□ 1.78
SSBP4-205ENST00000598159 RUFY4Q6ZNE9 571 aa26.17■■□□□ 1.78
SSBP4-205ENST00000598159 TMCO2Q7Z6W1 182 aaPredicted RBP26.17■■□□□ 1.78
SSBP4-205ENST00000598159 USP38Q8NB14 1042 aa26.17■■□□□ 1.78
SSBP4-205ENST00000598159 APBB2Q92870 758 aa26.17■■□□□ 1.78
SSBP4-205ENST00000598159 UPF3BQ9BZI7 483 aaKnown RBP26.17■■□□□ 1.78
SSBP4-205ENST00000598159 TBC1D22BQ9NU19 505 aa26.17■■□□□ 1.78
SSBP4-205ENST00000598159 IGKV6D-21A0A0A0MT36 114 aa26.16■■□□□ 1.78
SSBP4-205ENST00000598159 IPO5O00410 1097 aaKnown RBP26.16■■□□□ 1.78
SSBP4-205ENST00000598159 DHX15O43143 795 aaKnown RBP26.16■■□□□ 1.78
SSBP4-205ENST00000598159 CHRNA1P02708 482 aa26.16■■□□□ 1.78
SSBP4-205ENST00000598159 CIITAP33076 1130 aa26.16■■□□□ 1.78
SSBP4-205ENST00000598159 SETQ01105 290 aaPredicted RBP26.16■■□□□ 1.78
SSBP4-205ENST00000598159 CPLX2Q6PUV4 134 aaKnown RBP26.16■■□□□ 1.78
SSBP4-205ENST00000598159 CERS4Q9HA82 394 aa26.16■■□□□ 1.78
SSBP4-205ENST00000598159 VPS54Q9P1Q0 977 aa26.16■■□□□ 1.78
SSBP4-205ENST00000598159 TRPC6Q9Y210 931 aa26.16■■□□□ 1.78
SSBP4-205ENST00000598159 INSL6Q9Y581 213 aa26.16■■□□□ 1.78
SSBP4-205ENST00000598159 NLRP5P59047 1200 aa26.15■■□□□ 1.78
SSBP4-205ENST00000598159 IGBP1P78318 339 aa26.15■■□□□ 1.78
SSBP4-205ENST00000598159 PLCB4Q15147 1175 aa26.15■■□□□ 1.78
SSBP4-205ENST00000598159 ABHD15Q6UXT9 468 aa26.15■■□□□ 1.78
SSBP4-205ENST00000598159 DNAJB3Q8WWF6 145 aa26.15■■□□□ 1.78
SSBP4-205ENST00000598159 ARNTL2Q8WYA1 636 aa26.15■■□□□ 1.78
SSBP4-205ENST00000598159 ZNF577Q9BSK1 485 aa26.15■■□□□ 1.78
SSBP4-205ENST00000598159 OSBPL7Q9BZF2 842 aa26.15■■□□□ 1.78
SSBP4-205ENST00000598159 MICAL3Q7RTP6 2002 aa26.15■■□□□ 1.78
SSBP4-205ENST00000598159 POTEB3A0JP26 581 aa26.14■■□□□ 1.78
SSBP4-205ENST00000598159 DDX39AO00148 427 aaKnown RBP26.14■■□□□ 1.78
SSBP4-205ENST00000598159 RFXAPO00287 272 aa26.14■■□□□ 1.78
SSBP4-205ENST00000598159 GTPBP6O43824 516 aaPredicted RBP26.14■■□□□ 1.78
SSBP4-205ENST00000598159 ARHGEF15O94989 841 aa26.14■■□□□ 1.78
SSBP4-205ENST00000598159 CCNE2O96020 404 aa26.14■■□□□ 1.78
SSBP4-205ENST00000598159 USP11P51784 963 aa26.14■■□□□ 1.78
SSBP4-205ENST00000598159 CCDC85BQ15834 202 aaPredicted RBP26.14■■□□□ 1.78
SSBP4-205ENST00000598159 FAM160B1Q5W0V3 765 aa26.14■■□□□ 1.78
SSBP4-205ENST00000598159 POTEBQ6S5H4 581 aa26.14■■□□□ 1.78
SSBP4-205ENST00000598159 MYOCDQ8IZQ8 938 aa26.14■■□□□ 1.78
SSBP4-205ENST00000598159 LARP6Q9BRS8 491 aaKnown RBP26.14■■□□□ 1.78
SSBP4-205ENST00000598159 IFIH1Q9BYX4 1025 aaKnown RBP26.14■■□□□ 1.78
SSBP4-205ENST00000598159 UNC80Q8N2C7 3258 aa26.13■■□□□ 1.77
SSBP4-205ENST00000598159 CHD9Q3L8U1 2897 aa26.13■■□□□ 1.77
SSBP4-205ENST00000598159 LCHNA4D1U4 455 aa26.13■■□□□ 1.77
SSBP4-205ENST00000598159 DEXIO95424 95 aa26.13■■□□□ 1.77
SSBP4-205ENST00000598159 MGAT3Q09327 533 aa26.13■■□□□ 1.77
SSBP4-205ENST00000598159 IER5Q5VY09 327 aa26.13■■□□□ 1.77
SSBP4-205ENST00000598159 MIS18BP1Q6P0N0 1132 aa26.13■■□□□ 1.77
SSBP4-205ENST00000598159 FAM117BQ6P1L5 589 aa26.13■■□□□ 1.77
SSBP4-205ENST00000598159 FAM177A1Q8N128 213 aaPredicted RBP26.13■■□□□ 1.77
SSBP4-205ENST00000598159 RASGRP4Q8TDF6 673 aa26.13■■□□□ 1.77
SSBP4-205ENST00000598159 TOP1MTQ969P6 601 aa26.13■■□□□ 1.77
SSBP4-205ENST00000598159 COL25A1Q9BXS0 654 aaPredicted RBP26.13■■□□□ 1.77
SSBP4-205ENST00000598159 C22orf23Q9BZE7 217 aa26.13■■□□□ 1.77
SSBP4-205ENST00000598159 PCDHA2Q9Y5H9 948 aa26.13■■□□□ 1.77
SSBP4-205ENST00000598159 BACH1O14867 736 aa26.12■■□□□ 1.77
SSBP4-205ENST00000598159 HBP1O60381 514 aa26.12■■□□□ 1.77
SSBP4-205ENST00000598159 EIF5BO60841 1220 aaKnown RBP26.12■■□□□ 1.77
SSBP4-205ENST00000598159 ANAPC15P60006 121 aa26.12■■□□□ 1.77
SSBP4-205ENST00000598159 STK3Q13188 491 aa26.12■■□□□ 1.77
SSBP4-205ENST00000598159 PRR16Q569H4 304 aa26.12■■□□□ 1.77
SSBP4-205ENST00000598159 ZNF746Q6NUN9 644 aaPredicted RBP26.12■■□□□ 1.77
SSBP4-205ENST00000598159 ZNF302Q9NR11 478 aa26.12■■□□□ 1.77
SSBP4-205ENST00000598159 MTCH2Q9Y6C9 303 aa26.12■■□□□ 1.77
SSBP4-205ENST00000598159 EPOPA6NHQ4 379 aa26.11■■□□□ 1.77
SSBP4-205ENST00000598159 HTRA4P83105 476 aaPredicted RBP26.11■■□□□ 1.77
SSBP4-205ENST00000598159 SWSAP1Q6NVH7 229 aa26.11■■□□□ 1.77
SSBP4-205ENST00000598159 NME8Q8N427 588 aa26.11■■□□□ 1.77
SSBP4-205ENST00000598159 TGS1Q96RS0 853 aaKnown RBP26.11■■□□□ 1.77
SSBP4-205ENST00000598159 TSPYL2Q9H2G4 693 aaPredicted RBP26.11■■□□□ 1.77
SSBP4-205ENST00000598159 TCEAL9Q9UHQ7 104 aa26.11■■□□□ 1.77
SSBP4-205ENST00000598159 PCDHA4Q9UN74 947 aa26.11■■□□□ 1.77
SSBP4-205ENST00000598159 SQORQ9Y6N5 450 aa26.11■■□□□ 1.77
SSBP4-205ENST00000598159 A0A0C4DFX4 3053 aa26.1■■□□□ 1.77
SSBP4-205ENST00000598159 LOC101059915A0A1B0GWI6 518 aaPredicted RBP26.1■■□□□ 1.77
SSBP4-205ENST00000598159 LINC01553A4QN01 128 aa26.1■■□□□ 1.77
SSBP4-205ENST00000598159 CENPBP07199 599 aaPredicted RBP26.1■■□□□ 1.77
SSBP4-205ENST00000598159 ERVK-21P61565 698 aa26.1■■□□□ 1.77
SSBP4-205ENST00000598159 MRPS6P82932 125 aaKnown RBP26.1■■□□□ 1.77
SSBP4-205ENST00000598159 KRT76Q01546 638 aa26.1■■□□□ 1.77
SSBP4-205ENST00000598159 GALNT17Q6IS24 598 aa26.1■■□□□ 1.77
SSBP4-205ENST00000598159 SMAP1Q8IYB5 467 aaPredicted RBP26.1■■□□□ 1.77
SSBP4-205ENST00000598159 ATXN2LQ8WWM7 1075 aaKnown RBP26.1■■□□□ 1.77
SSBP4-205ENST00000598159 SYMPKQ92797 1274 aaKnown RBP26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms