RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 KATNAL1Q9BW62 490 aa24.87■■□□□ 1.57
CHMP2A-204ENST00000597848 IGKV6D-21A0A0A0MT36 114 aa24.86■■□□□ 1.57
CHMP2A-204ENST00000597848 F2P00734 622 aa24.86■■□□□ 1.57
CHMP2A-204ENST00000597848 MARK3P27448 753 aa24.86■■□□□ 1.57
CHMP2A-204ENST00000597848 ATN1P54259 1190 aaPredicted RBP24.86■■□□□ 1.57
CHMP2A-204ENST00000597848 IL17AQ16552 155 aa24.86■■□□□ 1.57
CHMP2A-204ENST00000597848 KIAA0753Q2KHM9 967 aa24.86■■□□□ 1.57
CHMP2A-204ENST00000597848 PDXDC2PQ6P474 469 aa24.86■■□□□ 1.57
CHMP2A-204ENST00000597848 ERAP1Q9NZ08 941 aa24.86■■□□□ 1.57
CHMP2A-204ENST00000597848 LRWD1Q9UFC0 647 aa24.86■■□□□ 1.57
CHMP2A-204ENST00000597848 EMSYQ7Z589 1322 aa24.86■■□□□ 1.57
CHMP2A-204ENST00000597848 ITGA7Q13683 1181 aa24.85■■□□□ 1.57
CHMP2A-204ENST00000597848 PDIA5Q14554 519 aa24.85■■□□□ 1.57
CHMP2A-204ENST00000597848 NBPF20Q3BBV1 942 aa24.85■■□□□ 1.57
CHMP2A-204ENST00000597848 PLPPR4Q7Z2D5 763 aa24.85■■□□□ 1.57
CHMP2A-204ENST00000597848 CKAP2LQ8IYA6 745 aa24.85■■□□□ 1.57
CHMP2A-204ENST00000597848 LINC00301Q8NCQ3 95 aa24.85■■□□□ 1.57
CHMP2A-204ENST00000597848 ERMNQ8TAM6 284 aa24.85■■□□□ 1.57
CHMP2A-204ENST00000597848 PPP1R13LQ8WUF5 828 aa24.85■■□□□ 1.57
CHMP2A-204ENST00000597848 CHAMP1Q96JM3 812 aa24.85■■□□□ 1.57
CHMP2A-204ENST00000597848 A0A0U1RQG5 324 aaPredicted RBP24.84■■□□□ 1.57
CHMP2A-204ENST00000597848 CAPN15O75808 1086 aa24.84■■□□□ 1.57
CHMP2A-204ENST00000597848 YEATS4O95619 227 aa24.84■■□□□ 1.57
CHMP2A-204ENST00000597848 KRT85P78386 507 aa24.84■■□□□ 1.57
CHMP2A-204ENST00000597848 FAM47CQ5HY64 1035 aa24.84■■□□□ 1.57
CHMP2A-204ENST00000597848 TRMT1LQ7Z2T5 733 aaKnown RBP24.84■■□□□ 1.57
CHMP2A-204ENST00000597848 BANK1Q8NDB2 785 aa24.84■■□□□ 1.57
CHMP2A-204ENST00000597848 AFAP1L1Q8TED9 768 aa24.84■■□□□ 1.57
CHMP2A-204ENST00000597848 ATP6V0A1Q93050 837 aa24.84■■□□□ 1.57
CHMP2A-204ENST00000597848 EIF2AK1Q9BQI3 630 aaKnown RBP24.84■■□□□ 1.57
CHMP2A-204ENST00000597848 SPTLC2O15270 562 aa24.83■■□□□ 1.57
CHMP2A-204ENST00000597848 P4HBP07237 508 aaKnown RBP24.83■■□□□ 1.57
CHMP2A-204ENST00000597848 SLC39A5Q6ZMH5 540 aa24.83■■□□□ 1.57
CHMP2A-204ENST00000597848 UBE2Q1Q7Z7E8 422 aa24.83■■□□□ 1.57
CHMP2A-204ENST00000597848 C7orf31Q8N865 590 aa24.83■■□□□ 1.57
CHMP2A-204ENST00000597848 DYDC2Q96IM9 177 aa24.83■■□□□ 1.57
CHMP2A-204ENST00000597848 RNPEPQ9H4A4 650 aa24.83■■□□□ 1.57
CHMP2A-204ENST00000597848 RGL1Q9NZL6 768 aa24.83■■□□□ 1.57
CHMP2A-204ENST00000597848 MAFBQ9Y5Q3 323 aaPredicted RBP24.83■■□□□ 1.57
CHMP2A-204ENST00000597848 HAS3O00219 553 aa24.82■■□□□ 1.56
CHMP2A-204ENST00000597848 QARSP47897 775 aaKnown RBP24.82■■□□□ 1.56
CHMP2A-204ENST00000597848 SLC26A2P50443 739 aa24.82■■□□□ 1.56
CHMP2A-204ENST00000597848 PSMC5P62195 406 aa24.82■■□□□ 1.56
CHMP2A-204ENST00000597848 CYP4A11Q02928 519 aa24.82■■□□□ 1.56
CHMP2A-204ENST00000597848 CTTNQ14247 550 aaKnown RBP24.82■■□□□ 1.56
CHMP2A-204ENST00000597848 UGCGQ16739 394 aa24.82■■□□□ 1.56
CHMP2A-204ENST00000597848 TPH2Q8IWU9 490 aa24.82■■□□□ 1.56
CHMP2A-204ENST00000597848 IGSF22Q8N9C0 903 aa24.82■■□□□ 1.56
CHMP2A-204ENST00000597848 TRPC6Q9Y210 931 aa24.82■■□□□ 1.56
CHMP2A-204ENST00000597848 GRIN2DO15399 1336 aa24.82■■□□□ 1.56
CHMP2A-204ENST00000597848 ARVCFO00192 962 aa24.81■■□□□ 1.56
CHMP2A-204ENST00000597848 DKC1O60832 514 aaKnown RBP eCLIP24.81■■□□□ 1.56
CHMP2A-204ENST00000597848 PLCB4Q15147 1175 aa24.81■■□□□ 1.56
CHMP2A-204ENST00000597848 KRI1Q8N9T8 703 aaKnown RBP24.81■■□□□ 1.56
CHMP2A-204ENST00000597848 NEK9Q8TD19 979 aa24.81■■□□□ 1.56
CHMP2A-204ENST00000597848 FBXO2Q9UK22 296 aaPredicted RBP24.81■■□□□ 1.56
CHMP2A-204ENST00000597848 SRPRBQ9Y5M8 271 aaKnown RBP24.81■■□□□ 1.56
CHMP2A-204ENST00000597848 STK24Q9Y6E0 443 aa24.81■■□□□ 1.56
CHMP2A-204ENST00000597848 POTEB3A0JP26 581 aa24.8■■□□□ 1.56
CHMP2A-204ENST00000597848 PP2D1A8MPX8 630 aa24.8■■□□□ 1.56
CHMP2A-204ENST00000597848 SLITRK3O94933 977 aa24.8■■□□□ 1.56
CHMP2A-204ENST00000597848 CDC25AP30304 524 aa24.8■■□□□ 1.56
CHMP2A-204ENST00000597848 LONP1P36776 959 aaKnown RBP24.8■■□□□ 1.56
CHMP2A-204ENST00000597848 CCT6AP40227 531 aaKnown RBP24.8■■□□□ 1.56
CHMP2A-204ENST00000597848 GRIN1Q05586 938 aa24.8■■□□□ 1.56
CHMP2A-204ENST00000597848 KRT79Q5XKE5 535 aa24.8■■□□□ 1.56
CHMP2A-204ENST00000597848 HAUS3Q68CZ6 603 aa24.8■■□□□ 1.56
CHMP2A-204ENST00000597848 NFRKBQ6P4R8 1299 aa24.8■■□□□ 1.56
CHMP2A-204ENST00000597848 POTEBQ6S5H4 581 aa24.8■■□□□ 1.56
CHMP2A-204ENST00000597848 KCNG4Q8TDN1 519 aa24.8■■□□□ 1.56
CHMP2A-204ENST00000597848 TNPO1Q92973 898 aaKnown RBP24.8■■□□□ 1.56
CHMP2A-204ENST00000597848 SPATA32Q96LK8 384 aa24.8■■□□□ 1.56
CHMP2A-204ENST00000597848 HSD17B14Q9BPX1 270 aa24.8■■□□□ 1.56
CHMP2A-204ENST00000597848 LXNQ9BS40 222 aa24.8■■□□□ 1.56
CHMP2A-204ENST00000597848 SEZ6LQ9BYH1 1024 aa24.8■■□□□ 1.56
CHMP2A-204ENST00000597848 ZSWIM4Q9H7M6 989 aa24.8■■□□□ 1.56
CHMP2A-204ENST00000597848 NRBP2Q9NSY0 501 aa24.8■■□□□ 1.56
CHMP2A-204ENST00000597848 HDAC6Q9UBN7 1215 aa24.8■■□□□ 1.56
CHMP2A-204ENST00000597848 RCOR1Q9UKL0 485 aa24.8■■□□□ 1.56
CHMP2A-204ENST00000597848 MORC2Q9Y6X9 1032 aaPredicted RBP24.8■■□□□ 1.56
CHMP2A-204ENST00000597848 IGSF9BQ9UPX0 1349 aa24.8■■□□□ 1.56
CHMP2A-204ENST00000597848 ZNF862O60290 1169 aa24.79■■□□□ 1.56
CHMP2A-204ENST00000597848 PPP6R2O75170 966 aa24.79■■□□□ 1.56
CHMP2A-204ENST00000597848 SMIM10L2AP0DMW4 78 aa24.79■■□□□ 1.56
CHMP2A-204ENST00000597848 SMIM10L2BP0DMW5 78 aa24.79■■□□□ 1.56
CHMP2A-204ENST00000597848 ATP4AP20648 1035 aa24.79■■□□□ 1.56
CHMP2A-204ENST00000597848 ME1P48163 572 aa24.79■■□□□ 1.56
CHMP2A-204ENST00000597848 PRKCEQ02156 737 aa24.79■■□□□ 1.56
CHMP2A-204ENST00000597848 SNX29Q8TEQ0 813 aa24.79■■□□□ 1.56
CHMP2A-204ENST00000597848 ATP8B4Q8TF62 1192 aa24.79■■□□□ 1.56
CHMP2A-204ENST00000597848 FAM167AQ96KS9 214 aa24.79■■□□□ 1.56
CHMP2A-204ENST00000597848 CLIC6Q96NY7 704 aa24.79■■□□□ 1.56
CHMP2A-204ENST00000597848 SCAND2PQ9GZW5 306 aaPredicted RBP24.79■■□□□ 1.56
CHMP2A-204ENST00000597848 CSRNP2Q9H175 543 aa24.79■■□□□ 1.56
CHMP2A-204ENST00000597848 DDX11L8A8MPP1 907 aa24.78■■□□□ 1.56
CHMP2A-204ENST00000597848 OATP04181 439 aa24.78■■□□□ 1.56
CHMP2A-204ENST00000597848 PPFIA1Q13136 1202 aa24.78■■□□□ 1.56
CHMP2A-204ENST00000597848 ZRSR1Q15695 479 aaKnown RBP24.78■■□□□ 1.56
CHMP2A-204ENST00000597848 LRRC26Q2I0M4 334 aa24.78■■□□□ 1.56
CHMP2A-204ENST00000597848 CATSPER3Q86XQ3 398 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms