RNA–Protein interactions for RNA: ENST00000596672.5

LIG1-213, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-213ENST00000596672 ARNTL2Q8WYA1 636 aa11.99□□□□□ -0.49
LIG1-213ENST00000596672 LENG9Q96B70 501 aa11.99□□□□□ -0.49
LIG1-213ENST00000596672 AIFM3Q96NN9 605 aa11.99□□□□□ -0.49
LIG1-213ENST00000596672 UPF3BQ9BZI7 483 aaKnown RBP11.99□□□□□ -0.49
LIG1-213ENST00000596672 EHMT1Q9H9B1 1298 aa11.99□□□□□ -0.49
LIG1-213ENST00000596672 NAP1L2Q9ULW6 460 aaPredicted RBP11.99□□□□□ -0.49
LIG1-213ENST00000596672 MYH9P35579 1960 aaKnown RBP11.99□□□□□ -0.49
LIG1-213ENST00000596672 IGKV6D-21A0A0A0MT36 114 aa11.98□□□□□ -0.49
LIG1-213ENST00000596672 ABHD14A-ACY1A0A1B0GW23 586 aa11.98□□□□□ -0.49
LIG1-213ENST00000596672 LINC01553A4QN01 128 aa11.98□□□□□ -0.49
LIG1-213ENST00000596672 ZBTB42B2RXF5 422 aa11.98□□□□□ -0.49
LIG1-213ENST00000596672 HMGB1P09429 215 aaKnown RBP11.98□□□□□ -0.49
LIG1-213ENST00000596672 LINC00271P0C7V0 271 aa11.98□□□□□ -0.49
LIG1-213ENST00000596672 INSRRP14616 1297 aa11.98□□□□□ -0.49
LIG1-213ENST00000596672 POU3F3P20264 500 aaPredicted RBP11.98□□□□□ -0.49
LIG1-213ENST00000596672 LPIN1Q14693 890 aa11.98□□□□□ -0.49
LIG1-213ENST00000596672 GRIK4Q16099 956 aa11.98□□□□□ -0.49
LIG1-213ENST00000596672 RTN4RL1Q86UN2 441 aaPredicted RBP11.98□□□□□ -0.49
LIG1-213ENST00000596672 LINC01599Q8WXQ3 324 aa11.98□□□□□ -0.49
LIG1-213ENST00000596672 GJA10Q969M2 543 aa11.98□□□□□ -0.49
LIG1-213ENST00000596672 ZMYND12Q9H0C1 365 aa11.98□□□□□ -0.49
LIG1-213ENST00000596672 AGO3Q9H9G7 860 aaKnown RBP11.98□□□□□ -0.49
LIG1-213ENST00000596672 NFASCO94856 1347 aa11.97□□□□□ -0.49
LIG1-213ENST00000596672 EMSYQ7Z589 1322 aa11.97□□□□□ -0.49
LIG1-213ENST00000596672 ESYT2A0FGR8 921 aa11.97□□□□□ -0.49
LIG1-213ENST00000596672 DDX39AO00148 427 aaKnown RBP11.97□□□□□ -0.49
LIG1-213ENST00000596672 TLL1O43897 1013 aa11.97□□□□□ -0.49
LIG1-213ENST00000596672 CYP3A4P08684 503 aa11.97□□□□□ -0.49
LIG1-213ENST00000596672 HTRA4P83105 476 aaPredicted RBP11.97□□□□□ -0.49
LIG1-213ENST00000596672 TFF2Q03403 129 aa11.97□□□□□ -0.49
LIG1-213ENST00000596672 PPFIA1Q13136 1202 aa11.97□□□□□ -0.49
LIG1-213ENST00000596672 ABHD15Q6UXT9 468 aa11.97□□□□□ -0.49
LIG1-213ENST00000596672 RUFY3Q7L099 469 aa11.97□□□□□ -0.49
LIG1-213ENST00000596672 RPAINQ86UA6 219 aa11.97□□□□□ -0.49
LIG1-213ENST00000596672 DNAJB3Q8WWF6 145 aa11.97□□□□□ -0.49
LIG1-213ENST00000596672 GAS2L1Q99501 681 aaPredicted RBP11.97□□□□□ -0.49
LIG1-213ENST00000596672 C17orf80Q9BSJ5 609 aa11.97□□□□□ -0.49
LIG1-213ENST00000596672 SUGCTQ9HAC7 445 aa11.97□□□□□ -0.49
LIG1-213ENST00000596672 JPH1Q9HDC5 661 aaPredicted RBP11.97□□□□□ -0.49
LIG1-213ENST00000596672 VPS54Q9P1Q0 977 aa11.97□□□□□ -0.49
LIG1-213ENST00000596672 SLC9A2Q9UBY0 812 aa11.97□□□□□ -0.49
LIG1-213ENST00000596672 NLRC5Q86WI3 1866 aa11.97□□□□□ -0.49
LIG1-213ENST00000596672 NRCAMQ92823 1304 aa11.96□□□□□ -0.49
LIG1-213ENST00000596672 MAFGO15525 162 aa11.96□□□□□ -0.49
LIG1-213ENST00000596672 PARNO95453 639 aaKnown RBP11.96□□□□□ -0.49
LIG1-213ENST00000596672 FOSP01100 380 aaPredicted RBP11.96□□□□□ -0.49
LIG1-213ENST00000596672 GHRP10912 638 aa11.96□□□□□ -0.49
LIG1-213ENST00000596672 IFNAR1P17181 557 aa11.96□□□□□ -0.49
LIG1-213ENST00000596672 IGBP1P78318 339 aa11.96□□□□□ -0.49
LIG1-213ENST00000596672 AP3B2Q13367 1082 aa11.96□□□□□ -0.49
LIG1-213ENST00000596672 IKBKEQ14164 716 aa11.96□□□□□ -0.49
LIG1-213ENST00000596672 CCDC60Q8IWA6 550 aaPredicted RBP11.96□□□□□ -0.49
LIG1-213ENST00000596672 CRIPAKQ8N1N5 446 aa11.96□□□□□ -0.49
LIG1-213ENST00000596672 MICALL1Q8N3F8 863 aa11.96□□□□□ -0.49
LIG1-213ENST00000596672 GIMAP8Q8ND71 665 aaPredicted RBP11.96□□□□□ -0.49
LIG1-213ENST00000596672 SP7Q8TDD2 431 aaPredicted RBP11.96□□□□□ -0.49
LIG1-213ENST00000596672 GDPD5Q8WTR4 605 aa11.96□□□□□ -0.49
LIG1-213ENST00000596672 CDHR1Q96JP9 859 aa11.96□□□□□ -0.49
LIG1-213ENST00000596672 RAD9AQ99638 391 aa11.96□□□□□ -0.49
LIG1-213ENST00000596672 SLC26A6Q9BXS9 759 aa11.96□□□□□ -0.49
LIG1-213ENST00000596672 SMARCAD1Q9H4L7 1026 aa11.96□□□□□ -0.49
LIG1-213ENST00000596672 CDHR5Q9HBB8 845 aa11.96□□□□□ -0.49
LIG1-213ENST00000596672 GJB4Q9NTQ9 266 aa11.96□□□□□ -0.49
LIG1-213ENST00000596672 MTUS1Q9ULD2 1270 aa11.96□□□□□ -0.49
LIG1-213ENST00000596672 C5orf42Q9H799 3197 aa11.95□□□□□ -0.5
LIG1-213ENST00000596672 hCG_1984214I3L0E3 225 aa11.95□□□□□ -0.5
LIG1-213ENST00000596672 M0R2N6 131 aa11.95□□□□□ -0.5
LIG1-213ENST00000596672 SEC24BO95487 1268 aa11.95□□□□□ -0.5
LIG1-213ENST00000596672 KCNJ6P48051 423 aa11.95□□□□□ -0.5
LIG1-213ENST00000596672 ERVK-21P61565 698 aa11.95□□□□□ -0.5
LIG1-213ENST00000596672 TMEM62Q0P6H9 643 aa11.95□□□□□ -0.5
LIG1-213ENST00000596672 FBXO47Q5MNV8 452 aa11.95□□□□□ -0.5
LIG1-213ENST00000596672 NIPA1Q7RTP0 329 aa11.95□□□□□ -0.5
LIG1-213ENST00000596672 PLA2G4DQ86XP0 818 aa11.95□□□□□ -0.5
LIG1-213ENST00000596672 MYOCDQ8IZQ8 938 aa11.95□□□□□ -0.5
LIG1-213ENST00000596672 ZNF713Q8N859 430 aaPredicted RBP11.95□□□□□ -0.5
LIG1-213ENST00000596672 GLG1Q92896 1179 aa11.95□□□□□ -0.5
LIG1-213ENST00000596672 TOP1MTQ969P6 601 aa11.95□□□□□ -0.5
LIG1-213ENST00000596672 NECAB3Q96P71 396 aaPredicted RBP11.95□□□□□ -0.5
LIG1-213ENST00000596672 RC3H2Q9HBD1 1191 aaKnown RBP11.95□□□□□ -0.5
LIG1-213ENST00000596672 ERAP1Q9NZ08 941 aa11.95□□□□□ -0.5
LIG1-213ENST00000596672 TUBE1Q9UJT0 475 aa11.95□□□□□ -0.5
LIG1-213ENST00000596672 ZNF215Q9UL58 517 aaPredicted RBP11.95□□□□□ -0.5
LIG1-213ENST00000596672 CDY2AQ9Y6F7 541 aa11.95□□□□□ -0.5
LIG1-213ENST00000596672 ENPP3O14638 875 aa11.94□□□□□ -0.5
LIG1-213ENST00000596672 CAND2O75155 1236 aa11.94□□□□□ -0.5
LIG1-213ENST00000596672 REC8O95072 547 aa11.94□□□□□ -0.5
LIG1-213ENST00000596672 CTDNEP1O95476 244 aa11.94□□□□□ -0.5
LIG1-213ENST00000596672 CIITAP33076 1130 aa11.94□□□□□ -0.5
LIG1-213ENST00000596672 STAT5BP51692 787 aa11.94□□□□□ -0.5
LIG1-213ENST00000596672 PLPPR4Q7Z2D5 763 aa11.94□□□□□ -0.5
LIG1-213ENST00000596672 TMEM40Q8WWA1 233 aa11.94□□□□□ -0.5
LIG1-213ENST00000596672 RNF26Q9BY78 433 aaPredicted RBP11.94□□□□□ -0.5
LIG1-213ENST00000596672 TM6SF1Q9BZW5 370 aa11.94□□□□□ -0.5
LIG1-213ENST00000596672 FAM49AQ9H0Q0 323 aaPredicted RBP11.94□□□□□ -0.5
LIG1-213ENST00000596672 TMX1Q9H3N1 280 aa11.94□□□□□ -0.5
LIG1-213ENST00000596672 KIAA1671Q9BY89 1806 aa11.94□□□□□ -0.5
LIG1-213ENST00000596672 ZNF862O60290 1169 aa11.93□□□□□ -0.5
LIG1-213ENST00000596672 UPP2O95045 317 aa11.93□□□□□ -0.5
LIG1-213ENST00000596672 LARGE1O95461 756 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms