RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 STAT5BP51692 787 aa25.35■■□□□ 1.65
SNRNP70-204ENST00000595231 PLPPR4Q7Z2D5 763 aa25.35■■□□□ 1.65
SNRNP70-204ENST00000595231 TNPO1Q92973 898 aaKnown RBP25.35■■□□□ 1.65
SNRNP70-204ENST00000595231 HSD17B14Q9BPX1 270 aa25.35■■□□□ 1.65
SNRNP70-204ENST00000595231 SMARCAD1Q9H4L7 1026 aa25.35■■□□□ 1.65
SNRNP70-204ENST00000595231 TUT1Q9H6E5 874 aaKnown RBP25.35■■□□□ 1.65
SNRNP70-204ENST00000595231 GABBR1Q9UBS5 961 aa25.35■■□□□ 1.65
SNRNP70-204ENST00000595231 LRWD1Q9UFC0 647 aa25.35■■□□□ 1.65
SNRNP70-204ENST00000595231 SCN10AQ9Y5Y9 1956 aa25.35■■□□□ 1.65
SNRNP70-204ENST00000595231 HAS3O00219 553 aa25.34■■□□□ 1.65
SNRNP70-204ENST00000595231 NCLP19338 710 aaKnown RBP25.34■■□□□ 1.65
SNRNP70-204ENST00000595231 SOX10P56693 466 aa25.34■■□□□ 1.65
SNRNP70-204ENST00000595231 UGCGQ16739 394 aa25.34■■□□□ 1.65
SNRNP70-204ENST00000595231 UBE2Q1Q7Z7E8 422 aa25.34■■□□□ 1.65
SNRNP70-204ENST00000595231 LEO1Q8WVC0 666 aaPredicted RBP25.34■■□□□ 1.65
SNRNP70-204ENST00000595231 GLG1Q92896 1179 aa25.34■■□□□ 1.65
SNRNP70-204ENST00000595231 PAWRQ96IZ0 340 aaKnown RBP25.34■■□□□ 1.65
SNRNP70-204ENST00000595231 EIF2AK1Q9BQI3 630 aaKnown RBP25.34■■□□□ 1.65
SNRNP70-204ENST00000595231 AZI2Q9H6S1 392 aa25.34■■□□□ 1.65
SNRNP70-204ENST00000595231 ZNF302Q9NR11 478 aa25.34■■□□□ 1.65
SNRNP70-204ENST00000595231 RGL1Q9NZL6 768 aa25.34■■□□□ 1.65
SNRNP70-204ENST00000595231 PP2D1A8MPX8 630 aa25.33■■□□□ 1.65
SNRNP70-204ENST00000595231 BACH1O14867 736 aa25.33■■□□□ 1.65
SNRNP70-204ENST00000595231 CABYRO75952 493 aa25.33■■□□□ 1.65
SNRNP70-204ENST00000595231 SLITRK3O94933 977 aa25.33■■□□□ 1.65
SNRNP70-204ENST00000595231 ATP4AP20648 1035 aa25.33■■□□□ 1.65
SNRNP70-204ENST00000595231 CDC25AP30304 524 aa25.33■■□□□ 1.65
SNRNP70-204ENST00000595231 GLT1D1Q96MS3 346 aa25.33■■□□□ 1.65
SNRNP70-204ENST00000595231 CLIC6Q96NY7 704 aa25.33■■□□□ 1.65
SNRNP70-204ENST00000595231 RAB34Q9BZG1 259 aa25.33■■□□□ 1.65
SNRNP70-204ENST00000595231 MYH9P35579 1960 aaKnown RBP25.33■■□□□ 1.65
SNRNP70-204ENST00000595231 GRIN2DO15399 1336 aa25.33■■□□□ 1.65
SNRNP70-204ENST00000595231 IGSF9BQ9UPX0 1349 aa25.33■■□□□ 1.65
SNRNP70-204ENST00000595231 ZNF862O60290 1169 aa25.32■■□□□ 1.64
SNRNP70-204ENST00000595231 PSMC6P62333 389 aa25.32■■□□□ 1.64
SNRNP70-204ENST00000595231 KRI1Q8N9T8 703 aaKnown RBP25.32■■□□□ 1.64
SNRNP70-204ENST00000595231 BANK1Q8NDB2 785 aa25.32■■□□□ 1.64
SNRNP70-204ENST00000595231 KCNG4Q8TDN1 519 aa25.32■■□□□ 1.64
SNRNP70-204ENST00000595231 SENP6Q9GZR1 1112 aaPredicted RBP25.32■■□□□ 1.64
SNRNP70-204ENST00000595231 CSRNP2Q9H175 543 aa25.32■■□□□ 1.64
SNRNP70-204ENST00000595231 RNPEPQ9H4A4 650 aa25.32■■□□□ 1.64
SNRNP70-204ENST00000595231 ERAP1Q9NZ08 941 aa25.32■■□□□ 1.64
SNRNP70-204ENST00000595231 WRAP73Q9P2S5 460 aaPredicted RBP25.32■■□□□ 1.64
SNRNP70-204ENST00000595231 P4HBP07237 508 aaKnown RBP25.32■■□□□ 1.64
SNRNP70-204ENST00000595231 SPATA31C1P0DKV0 1188 aa25.32■■□□□ 1.64
SNRNP70-204ENST00000595231 LONP1P36776 959 aaKnown RBP25.32■■□□□ 1.64
SNRNP70-204ENST00000595231 FAM160B1Q5W0V3 765 aa25.32■■□□□ 1.64
SNRNP70-204ENST00000595231 PDXDC2PQ6P474 469 aa25.32■■□□□ 1.64
SNRNP70-204ENST00000595231 DYDC2Q96IM9 177 aa25.32■■□□□ 1.64
SNRNP70-204ENST00000595231 SPATA32Q96LK8 384 aa25.32■■□□□ 1.64
SNRNP70-204ENST00000595231 MMTAG2Q9BU76 263 aaKnown RBP25.32■■□□□ 1.64
SNRNP70-204ENST00000595231 SCAND2PQ9GZW5 306 aaPredicted RBP25.32■■□□□ 1.64
SNRNP70-204ENST00000595231 PSEN2P49810 448 aa25.31■■□□□ 1.64
SNRNP70-204ENST00000595231 MFSD10Q14728 455 aa25.31■■□□□ 1.64
SNRNP70-204ENST00000595231 KIAA0753Q2KHM9 967 aa25.31■■□□□ 1.64
SNRNP70-204ENST00000595231 CATSPER3Q86XQ3 398 aa25.31■■□□□ 1.64
SNRNP70-204ENST00000595231 AK8Q96MA6 479 aa25.31■■□□□ 1.64
SNRNP70-204ENST00000595231 STARD7Q9NQZ5 370 aa25.31■■□□□ 1.64
SNRNP70-204ENST00000595231 ZNF215Q9UL58 517 aaPredicted RBP25.31■■□□□ 1.64
SNRNP70-204ENST00000595231 MARK3P27448 753 aa25.3■■□□□ 1.64
SNRNP70-204ENST00000595231 QARSP47897 775 aaKnown RBP25.3■■□□□ 1.64
SNRNP70-204ENST00000595231 SLC26A2P50443 739 aa25.3■■□□□ 1.64
SNRNP70-204ENST00000595231 PSMC5P62195 406 aa25.3■■□□□ 1.64
SNRNP70-204ENST00000595231 CYP4A11Q02928 519 aa25.3■■□□□ 1.64
SNRNP70-204ENST00000595231 CTTNQ14247 550 aaKnown RBP25.3■■□□□ 1.64
SNRNP70-204ENST00000595231 AXDND1Q5T1B0 1012 aaPredicted RBP25.3■■□□□ 1.64
SNRNP70-204ENST00000595231 PPP1R13LQ8WUF5 828 aa25.3■■□□□ 1.64
SNRNP70-204ENST00000595231 POLR3CQ9BUI4 534 aaPredicted RBP25.3■■□□□ 1.64
SNRNP70-204ENST00000595231 KATNAL1Q9BW62 490 aa25.3■■□□□ 1.64
SNRNP70-204ENST00000595231 GDPD2Q9HCC8 539 aa25.3■■□□□ 1.64
SNRNP70-204ENST00000595231 PCDHA7Q9UN72 937 aa25.3■■□□□ 1.64
SNRNP70-204ENST00000595231 MED24O75448 989 aa25.29■■□□□ 1.64
SNRNP70-204ENST00000595231 STBD1O95210 358 aa25.29■■□□□ 1.64
SNRNP70-204ENST00000595231 RPA1P27694 616 aa25.29■■□□□ 1.64
SNRNP70-204ENST00000595231 PLCB4Q15147 1175 aa25.29■■□□□ 1.64
SNRNP70-204ENST00000595231 NBPF20Q3BBV1 942 aa25.29■■□□□ 1.64
SNRNP70-204ENST00000595231 SPECC1Q5M775 1068 aa25.29■■□□□ 1.64
SNRNP70-204ENST00000595231 NECAB2Q7Z6G3 386 aa25.29■■□□□ 1.64
SNRNP70-204ENST00000595231 ATP6V0A1Q93050 837 aa25.29■■□□□ 1.64
SNRNP70-204ENST00000595231 VTI1AQ96AJ9 217 aa25.29■■□□□ 1.64
SNRNP70-204ENST00000595231 LXNQ9BS40 222 aa25.29■■□□□ 1.64
SNRNP70-204ENST00000595231 C11orf49Q9H6J7 331 aa25.29■■□□□ 1.64
SNRNP70-204ENST00000595231 ITGA7Q13683 1181 aa25.29■■□□□ 1.64
SNRNP70-204ENST00000595231 ECM1Q16610 540 aa25.29■■□□□ 1.64
SNRNP70-204ENST00000595231 USP49Q70CQ1 688 aa25.29■■□□□ 1.64
SNRNP70-204ENST00000595231 TPH2Q8IWU9 490 aa25.29■■□□□ 1.64
SNRNP70-204ENST00000595231 SLC43A3Q8NBI5 491 aa25.29■■□□□ 1.64
SNRNP70-204ENST00000595231 ERMNQ8TAM6 284 aa25.29■■□□□ 1.64
SNRNP70-204ENST00000595231 NEK9Q8TD19 979 aa25.29■■□□□ 1.64
SNRNP70-204ENST00000595231 TUFT1Q9NNX1 390 aa25.29■■□□□ 1.64
SNRNP70-204ENST00000595231 ME1P48163 572 aa25.28■■□□□ 1.64
SNRNP70-204ENST00000595231 CHMP4BP1P59074 171 aa25.28■■□□□ 1.64
SNRNP70-204ENST00000595231 ZNF579Q8NAF0 562 aaKnown RBP25.28■■□□□ 1.64
SNRNP70-204ENST00000595231 EPSTI1Q96J88 318 aa25.28■■□□□ 1.64
SNRNP70-204ENST00000595231 ZSWIM4Q9H7M6 989 aa25.28■■□□□ 1.64
SNRNP70-204ENST00000595231 CUTAO60888 179 aa25.27■■□□□ 1.64
SNRNP70-204ENST00000595231 KRT79Q5XKE5 535 aa25.27■■□□□ 1.64
SNRNP70-204ENST00000595231 HAUS3Q68CZ6 603 aa25.27■■□□□ 1.64
SNRNP70-204ENST00000595231 SLC39A5Q6ZMH5 540 aa25.27■■□□□ 1.64
SNRNP70-204ENST00000595231 C4orf19Q8IY42 314 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms