RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 LCHNA4D1U4 455 aa26.73■■□□□ 1.87
LSM4-204ENST00000594828 FAM86B1E9PN63 330 aa26.73■■□□□ 1.87
LSM4-204ENST00000594828 ADAMTS3O15072 1205 aa26.73■■□□□ 1.87
LSM4-204ENST00000594828 AMHP03971 560 aa26.73■■□□□ 1.87
LSM4-204ENST00000594828 FAM86B2P0C5J1 330 aa26.73■■□□□ 1.87
LSM4-204ENST00000594828 ERICH6BQ5W0A0 696 aa26.73■■□□□ 1.87
LSM4-204ENST00000594828 RUFY4Q6ZNE9 571 aa26.73■■□□□ 1.87
LSM4-204ENST00000594828 PLPPR4Q7Z2D5 763 aa26.73■■□□□ 1.87
LSM4-204ENST00000594828 CRYGNQ8WXF5 182 aa26.73■■□□□ 1.87
LSM4-204ENST00000594828 OSBPL7Q9BZF2 842 aa26.73■■□□□ 1.87
LSM4-204ENST00000594828 KAT6AQ92794 2004 aa26.73■■□□□ 1.87
LSM4-204ENST00000594828 MBLAC1A4D2B0 266 aaPredicted RBP26.72■■□□□ 1.87
LSM4-204ENST00000594828 RRN3P2A6NIE6 340 aa26.72■■□□□ 1.87
LSM4-204ENST00000594828 INSRRP14616 1297 aa26.72■■□□□ 1.87
LSM4-204ENST00000594828 STAT5BP51692 787 aa26.72■■□□□ 1.87
LSM4-204ENST00000594828 IGBP1P78318 339 aa26.72■■□□□ 1.87
LSM4-204ENST00000594828 MARCH8Q5T0T0 291 aa26.72■■□□□ 1.87
LSM4-204ENST00000594828 FAM117BQ6P1L5 589 aa26.72■■□□□ 1.87
LSM4-204ENST00000594828 RSPH3Q86UC2 560 aa26.72■■□□□ 1.87
LSM4-204ENST00000594828 CCDC148Q8NFR7 591 aa26.72■■□□□ 1.87
LSM4-204ENST00000594828 BICD2Q8TD16 824 aa26.72■■□□□ 1.87
LSM4-204ENST00000594828 A0A0C4DFX4 3053 aa26.72■■□□□ 1.87
LSM4-204ENST00000594828 UNC80Q8N2C7 3258 aa26.72■■□□□ 1.87
LSM4-204ENST00000594828 EPOPA6NHQ4 379 aa26.71■■□□□ 1.87
LSM4-204ENST00000594828 DDX39AO00148 427 aaKnown RBP26.71■■□□□ 1.87
LSM4-204ENST00000594828 ATG7O95352 703 aa26.71■■□□□ 1.87
LSM4-204ENST00000594828 CHRNA1P02708 482 aa26.71■■□□□ 1.87
LSM4-204ENST00000594828 MKRN4PQ13434 485 aaPredicted RBP26.71■■□□□ 1.87
LSM4-204ENST00000594828 MYOCDQ8IZQ8 938 aa26.71■■□□□ 1.87
LSM4-204ENST00000594828 ZNF274Q96GC6 653 aaPredicted RBP26.71■■□□□ 1.87
LSM4-204ENST00000594828 UPF3BQ9BZI7 483 aaKnown RBP26.71■■□□□ 1.87
LSM4-204ENST00000594828 PRDM6Q9NQX0 595 aa26.71■■□□□ 1.87
LSM4-204ENST00000594828 TRPC6Q9Y210 931 aa26.71■■□□□ 1.87
LSM4-204ENST00000594828 IGLV3-22A0A075B6J6 115 aa26.7■■□□□ 1.86
LSM4-204ENST00000594828 GTPBP6O43824 516 aaPredicted RBP26.7■■□□□ 1.86
LSM4-204ENST00000594828 PLCB4Q15147 1175 aa26.7■■□□□ 1.86
LSM4-204ENST00000594828 TRIM22Q8IYM9 498 aa26.7■■□□□ 1.86
LSM4-204ENST00000594828 DNAJB3Q8WWF6 145 aa26.7■■□□□ 1.86
LSM4-204ENST00000594828 APBB2Q92870 758 aa26.7■■□□□ 1.86
LSM4-204ENST00000594828 LARP6Q9BRS8 491 aaKnown RBP26.7■■□□□ 1.86
LSM4-204ENST00000594828 VPS54Q9P1Q0 977 aa26.7■■□□□ 1.86
LSM4-204ENST00000594828 IPO5O00410 1097 aaKnown RBP26.69■■□□□ 1.86
LSM4-204ENST00000594828 CCNE2O96020 404 aa26.69■■□□□ 1.86
LSM4-204ENST00000594828 POU3F3P20264 500 aaPredicted RBP26.69■■□□□ 1.86
LSM4-204ENST00000594828 SSRP1Q08945 709 aaKnown RBP26.69■■□□□ 1.86
LSM4-204ENST00000594828 SPRED2Q7Z698 418 aa26.69■■□□□ 1.86
LSM4-204ENST00000594828 MICALL1Q8N3F8 863 aa26.69■■□□□ 1.86
LSM4-204ENST00000594828 RASGRP4Q8TDF6 673 aa26.69■■□□□ 1.86
LSM4-204ENST00000594828 IFIH1Q9BYX4 1025 aaKnown RBP26.69■■□□□ 1.86
LSM4-204ENST00000594828 SH3GLB2Q9NR46 395 aa26.69■■□□□ 1.86
LSM4-204ENST00000594828 PDRG1Q9NUG6 133 aa26.69■■□□□ 1.86
LSM4-204ENST00000594828 INSL6Q9Y581 213 aa26.69■■□□□ 1.86
LSM4-204ENST00000594828 CPLX1O14810 134 aa26.68■■□□□ 1.86
LSM4-204ENST00000594828 DHX15O43143 795 aaKnown RBP26.68■■□□□ 1.86
LSM4-204ENST00000594828 RPLP2P05387 115 aaKnown RBP26.68■■□□□ 1.86
LSM4-204ENST00000594828 SLC26A2P50443 739 aa26.68■■□□□ 1.86
LSM4-204ENST00000594828 SETQ01105 290 aaPredicted RBP26.68■■□□□ 1.86
LSM4-204ENST00000594828 ABHD15Q6UXT9 468 aa26.68■■□□□ 1.86
LSM4-204ENST00000594828 UIMC1Q96RL1 719 aa26.68■■□□□ 1.86
LSM4-204ENST00000594828 ZNF577Q9BSK1 485 aa26.68■■□□□ 1.86
LSM4-204ENST00000594828 MTCH2Q9Y6C9 303 aa26.68■■□□□ 1.86
LSM4-204ENST00000594828 PRUNE2Q8WUY3 3088 aa26.68■■□□□ 1.86
LSM4-204ENST00000594828 CHD7Q9P2D1 2997 aa26.67■■□□□ 1.86
LSM4-204ENST00000594828 IGKV6D-21A0A0A0MT36 114 aa26.67■■□□□ 1.86
LSM4-204ENST00000594828 POTEB3A0JP26 581 aa26.67■■□□□ 1.86
LSM4-204ENST00000594828 BACH1O14867 736 aa26.67■■□□□ 1.86
LSM4-204ENST00000594828 NLRP5P59047 1200 aa26.67■■□□□ 1.86
LSM4-204ENST00000594828 MGAT3Q09327 533 aa26.67■■□□□ 1.86
LSM4-204ENST00000594828 FAM160B1Q5W0V3 765 aa26.67■■□□□ 1.86
LSM4-204ENST00000594828 POTEBQ6S5H4 581 aa26.67■■□□□ 1.86
LSM4-204ENST00000594828 ZBTB10Q96DT7 871 aa26.67■■□□□ 1.86
LSM4-204ENST00000594828 TBC1D22BQ9NU19 505 aa26.67■■□□□ 1.86
LSM4-204ENST00000594828 LINC01553A4QN01 128 aa26.66■■□□□ 1.86
LSM4-204ENST00000594828 GHRP10912 638 aa26.66■■□□□ 1.86
LSM4-204ENST00000594828 STK3Q13188 491 aa26.66■■□□□ 1.86
LSM4-204ENST00000594828 PRR16Q569H4 304 aa26.66■■□□□ 1.86
LSM4-204ENST00000594828 TRAPPC12Q8WVT3 735 aa26.66■■□□□ 1.86
LSM4-204ENST00000594828 ATXN2LQ8WWM7 1075 aaKnown RBP26.66■■□□□ 1.86
LSM4-204ENST00000594828 TOP1MTQ969P6 601 aa26.66■■□□□ 1.86
LSM4-204ENST00000594828 TGS1Q96RS0 853 aaKnown RBP26.66■■□□□ 1.86
LSM4-204ENST00000594828 FAM49AQ9H0Q0 323 aaPredicted RBP26.66■■□□□ 1.86
LSM4-204ENST00000594828 TSPYL2Q9H2G4 693 aaPredicted RBP26.66■■□□□ 1.86
LSM4-204ENST00000594828 THEGQ9P2T0 379 aa26.66■■□□□ 1.86
LSM4-204ENST00000594828 CDY2AQ9Y6F7 541 aa26.66■■□□□ 1.86
LSM4-204ENST00000594828 MICAL3Q7RTP6 2002 aa26.65■■□□□ 1.86
LSM4-204ENST00000594828 LOC101059915A0A1B0GWI6 518 aaPredicted RBP26.65■■□□□ 1.86
LSM4-204ENST00000594828 CIITAP33076 1130 aa26.65■■□□□ 1.86
LSM4-204ENST00000594828 ERVK-21P61565 698 aa26.65■■□□□ 1.86
LSM4-204ENST00000594828 MRPS6P82932 125 aaKnown RBP26.65■■□□□ 1.86
LSM4-204ENST00000594828 HTRA4P83105 476 aaPredicted RBP26.65■■□□□ 1.86
LSM4-204ENST00000594828 GRB10Q13322 594 aa26.65■■□□□ 1.86
LSM4-204ENST00000594828 IER5Q5VY09 327 aa26.65■■□□□ 1.86
LSM4-204ENST00000594828 MIS18BP1Q6P0N0 1132 aa26.65■■□□□ 1.86
LSM4-204ENST00000594828 CPLX2Q6PUV4 134 aaKnown RBP26.65■■□□□ 1.86
LSM4-204ENST00000594828 SYMPKQ92797 1274 aaKnown RBP26.65■■□□□ 1.86
LSM4-204ENST00000594828 ZNF302Q9NR11 478 aa26.65■■□□□ 1.86
LSM4-204ENST00000594828 MTUS1Q9ULD2 1270 aa26.65■■□□□ 1.86
LSM4-204ENST00000594828 PCDHA2Q9Y5H9 948 aa26.65■■□□□ 1.86
LSM4-204ENST00000594828 UPP2O95045 317 aa26.64■■□□□ 1.86
LSM4-204ENST00000594828 DEXIO95424 95 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms