RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 AZI2Q9H6S1 392 aa15.79■□□□□ 0.12
APOC1-208ENST00000592535 SH3GLB2Q9NR46 395 aa15.79■□□□□ 0.12
APOC1-208ENST00000592535 CDH23Q9H251 3354 aa15.79■□□□□ 0.12
APOC1-208ENST00000592535 LOXHD1Q8IVV2 1947 aa15.78■□□□□ 0.12
APOC1-208ENST00000592535 DHX15O43143 795 aaKnown RBP15.78■□□□□ 0.12
APOC1-208ENST00000592535 ARHGEF15O94989 841 aa15.78■□□□□ 0.12
APOC1-208ENST00000592535 ATG7O95352 703 aa15.78■□□□□ 0.12
APOC1-208ENST00000592535 DEXIO95424 95 aa15.78■□□□□ 0.12
APOC1-208ENST00000592535 INSRRP14616 1297 aa15.78■□□□□ 0.12
APOC1-208ENST00000592535 STAT5BP51692 787 aa15.78■□□□□ 0.12
APOC1-208ENST00000592535 IGBP1P78318 339 aa15.78■□□□□ 0.12
APOC1-208ENST00000592535 SCRN1Q12765 414 aa15.78■□□□□ 0.12
APOC1-208ENST00000592535 ADGRE1Q14246 886 aa15.78■□□□□ 0.12
APOC1-208ENST00000592535 PLCB4Q15147 1175 aa15.78■□□□□ 0.12
APOC1-208ENST00000592535 PLEKHG4Q58EX7 1191 aa15.78■□□□□ 0.12
APOC1-208ENST00000592535 MARCH8Q5T0T0 291 aa15.78■□□□□ 0.12
APOC1-208ENST00000592535 CPLX2Q6PUV4 134 aaKnown RBP15.78■□□□□ 0.12
APOC1-208ENST00000592535 ZBTB10Q96DT7 871 aa15.78■□□□□ 0.12
APOC1-208ENST00000592535 AIFM3Q96NN9 605 aa15.78■□□□□ 0.12
APOC1-208ENST00000592535 TUBE1Q9UJT0 475 aa15.78■□□□□ 0.12
APOC1-208ENST00000592535 MBLAC1A4D2B0 266 aaPredicted RBP15.77■□□□□ 0.12
APOC1-208ENST00000592535 KIF28PB7ZC32 967 aa15.77■□□□□ 0.12
APOC1-208ENST00000592535 IPO5O00410 1097 aaKnown RBP15.77■□□□□ 0.12
APOC1-208ENST00000592535 EDIL3O43854 480 aa15.77■□□□□ 0.12
APOC1-208ENST00000592535 TLL1O43897 1013 aa15.77■□□□□ 0.12
APOC1-208ENST00000592535 EFCAB14O75071 495 aa15.77■□□□□ 0.12
APOC1-208ENST00000592535 CIITAP33076 1130 aa15.77■□□□□ 0.12
APOC1-208ENST00000592535 SETQ01105 290 aaPredicted RBP15.77■□□□□ 0.12
APOC1-208ENST00000592535 MKRN4PQ13434 485 aaPredicted RBP15.77■□□□□ 0.12
APOC1-208ENST00000592535 PRR16Q569H4 304 aa15.77■□□□□ 0.12
APOC1-208ENST00000592535 FAM26DQ5JW98 314 aa15.77■□□□□ 0.12
APOC1-208ENST00000592535 TAF2Q6P1X5 1199 aa15.77■□□□□ 0.12
APOC1-208ENST00000592535 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.77■□□□□ 0.122e-6■■□□□ 11.9
APOC1-208ENST00000592535 PLPPR4Q7Z2D5 763 aa15.77■□□□□ 0.12
APOC1-208ENST00000592535 USP38Q8NB14 1042 aa15.77■□□□□ 0.12
APOC1-208ENST00000592535 ZNF577Q9BSK1 485 aa15.77■□□□□ 0.12
APOC1-208ENST00000592535 SLKQ9H2G2 1235 aaPredicted RBP15.77■□□□□ 0.12
APOC1-208ENST00000592535 TPCN1Q9ULQ1 816 aa15.77■□□□□ 0.12
APOC1-208ENST00000592535 TRPC6Q9Y210 931 aa15.77■□□□□ 0.12
APOC1-208ENST00000592535 IGKV6D-21A0A0A0MT36 114 aa15.76■□□□□ 0.11
APOC1-208ENST00000592535 LCHNA4D1U4 455 aa15.76■□□□□ 0.11
APOC1-208ENST00000592535 RRN3P2A6NIE6 340 aa15.76■□□□□ 0.11
APOC1-208ENST00000592535 DTNBO60941 627 aa15.76■□□□□ 0.11
APOC1-208ENST00000592535 CHRNA1P02708 482 aa15.76■□□□□ 0.11
APOC1-208ENST00000592535 AK2P54819 239 aa15.76■□□□□ 0.11
APOC1-208ENST00000592535 TAP1Q03518 808 aa15.76■□□□□ 0.11
APOC1-208ENST00000592535 ABHD15Q6UXT9 468 aa15.76■□□□□ 0.11
APOC1-208ENST00000592535 RPAINQ86UA6 219 aa15.76■□□□□ 0.11
APOC1-208ENST00000592535 CCDC60Q8IWA6 550 aaPredicted RBP15.76■□□□□ 0.11
APOC1-208ENST00000592535 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.76■□□□□ 0.11
APOC1-208ENST00000592535 TRAPPC12Q8WVT3 735 aa15.76■□□□□ 0.11
APOC1-208ENST00000592535 DNAJB3Q8WWF6 145 aa15.76■□□□□ 0.11
APOC1-208ENST00000592535 SEPT8Q92599 483 aa15.76■□□□□ 0.11
APOC1-208ENST00000592535 LENG9Q96B70 501 aa15.76■□□□□ 0.11
APOC1-208ENST00000592535 ZBED2Q9BTP6 218 aa15.76■□□□□ 0.11
APOC1-208ENST00000592535 CERS4Q9HA82 394 aa15.76■□□□□ 0.11
APOC1-208ENST00000592535 PCDHA4Q9UN74 947 aa15.76■□□□□ 0.11
APOC1-208ENST00000592535 EVPLQ92817 2033 aa15.76■□□□□ 0.11
APOC1-208ENST00000592535 CHD9Q3L8U1 2897 aa15.75■□□□□ 0.11
APOC1-208ENST00000592535 BACH1O14867 736 aa15.75■□□□□ 0.11
APOC1-208ENST00000592535 PFKFB2O60825 505 aa15.75■□□□□ 0.11
APOC1-208ENST00000592535 GJB5O95377 273 aa15.75■□□□□ 0.11
APOC1-208ENST00000592535 SEC24BO95487 1268 aa15.75■□□□□ 0.11
APOC1-208ENST00000592535 IGFBP4P22692 258 aa15.75■□□□□ 0.11
APOC1-208ENST00000592535 MGAT3Q09327 533 aa15.75■□□□□ 0.11
APOC1-208ENST00000592535 NPY5RQ15761 445 aa15.75■□□□□ 0.11
APOC1-208ENST00000592535 FAM117BQ6P1L5 589 aa15.75■□□□□ 0.11
APOC1-208ENST00000592535 SPRED2Q7Z698 418 aa15.75■□□□□ 0.11
APOC1-208ENST00000592535 RSPH3Q86UC2 560 aa15.75■□□□□ 0.11
APOC1-208ENST00000592535 BLIDQ8IZY5 108 aa15.75■□□□□ 0.11
APOC1-208ENST00000592535 IL17RAQ96F46 866 aa15.75■□□□□ 0.11
APOC1-208ENST00000592535 TBC1D22BQ9NU19 505 aa15.75■□□□□ 0.11
APOC1-208ENST00000592535 COL4A4P53420 1690 aaPredicted RBP15.75■□□□□ 0.11
APOC1-208ENST00000592535 POTEB3A0JP26 581 aa15.74■□□□□ 0.11
APOC1-208ENST00000592535 EPOPA6NHQ4 379 aa15.74■□□□□ 0.11
APOC1-208ENST00000592535 M0R2N6 131 aa15.74■□□□□ 0.11
APOC1-208ENST00000592535 RFXAPO00287 272 aa15.74■□□□□ 0.11
APOC1-208ENST00000592535 CDKL5O76039 1030 aa15.74■□□□□ 0.11
APOC1-208ENST00000592535 AMHP03971 560 aa15.74■□□□□ 0.11
APOC1-208ENST00000592535 SLC26A2P50443 739 aa15.74■□□□□ 0.11
APOC1-208ENST00000592535 USP11P51784 963 aa15.74■□□□□ 0.11
APOC1-208ENST00000592535 FAM160B1Q5W0V3 765 aa15.74■□□□□ 0.11
APOC1-208ENST00000592535 SWSAP1Q6NVH7 229 aa15.74■□□□□ 0.11
APOC1-208ENST00000592535 MIS18BP1Q6P0N0 1132 aa15.74■□□□□ 0.11
APOC1-208ENST00000592535 POTEBQ6S5H4 581 aa15.74■□□□□ 0.11
APOC1-208ENST00000592535 DAGLBQ8NCG7 672 aa15.74■□□□□ 0.11
APOC1-208ENST00000592535 TBCKQ8TEA7 893 aa15.74■□□□□ 0.11
APOC1-208ENST00000592535 PPM1EQ8WY54 764 aa15.74■□□□□ 0.11
APOC1-208ENST00000592535 TNPO1Q92973 898 aaKnown RBP15.74■□□□□ 0.11
APOC1-208ENST00000592535 FAM49AQ9H0Q0 323 aaPredicted RBP15.74■□□□□ 0.11
APOC1-208ENST00000592535 ZNF302Q9NR11 478 aa15.74■□□□□ 0.11
APOC1-208ENST00000592535 KCNJ14Q9UNX9 436 aa15.74■□□□□ 0.11
APOC1-208ENST00000592535 CDY2AQ9Y6F7 541 aa15.74■□□□□ 0.11
APOC1-208ENST00000592535 STK36Q9NRP7 1315 aa15.73■□□□□ 0.11
APOC1-208ENST00000592535 MSH4O15457 936 aa15.73■□□□□ 0.11
APOC1-208ENST00000592535 LARGE1O95461 756 aa15.73■□□□□ 0.11
APOC1-208ENST00000592535 CTDNEP1O95476 244 aa15.73■□□□□ 0.11
APOC1-208ENST00000592535 GHRP10912 638 aa15.73■□□□□ 0.11
APOC1-208ENST00000592535 MRPS6P82932 125 aaKnown RBP15.73■□□□□ 0.11
APOC1-208ENST00000592535 KRT76Q01546 638 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms