RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 PRELPP51888 382 aa21.75■■□□□ 1.07
MBD3-209ENST00000592012 CHMP4BP1P59074 171 aa21.75■■□□□ 1.07
MBD3-209ENST00000592012 ZNF577Q9BSK1 485 aa21.75■■□□□ 1.07
MBD3-209ENST00000592012 POLD4Q9HCU8 107 aa21.75■■□□□ 1.07
MBD3-209ENST00000592012 FAM184BQ9ULE4 1060 aa21.75■■□□□ 1.07
MBD3-209ENST00000592012 ZBTB39O15060 712 aa21.75■■□□□ 1.07
MBD3-209ENST00000592012 PRPF6O94906 941 aaKnown RBP21.75■■□□□ 1.07
MBD3-209ENST00000592012 TNFAIP1Q13829 316 aa21.75■■□□□ 1.07
MBD3-209ENST00000592012 BMT2Q1RMZ1 405 aa21.75■■□□□ 1.07
MBD3-209ENST00000592012 B3GNT9Q6UX72 402 aa21.75■■□□□ 1.07
MBD3-209ENST00000592012 ZSWIM4Q9H7M6 989 aa21.75■■□□□ 1.07
MBD3-209ENST00000592012 PDXKO00764 312 aa21.74■■□□□ 1.07
MBD3-209ENST00000592012 WDR46O15213 610 aaKnown RBP21.74■■□□□ 1.07
MBD3-209ENST00000592012 POLD1P28340 1107 aa21.74■■□□□ 1.07
MBD3-209ENST00000592012 SETQ01105 290 aaPredicted RBP21.74■■□□□ 1.07
MBD3-209ENST00000592012 C1orf186Q6ZWK4 172 aa21.74■■□□□ 1.07
MBD3-209ENST00000592012 KRT26Q7Z3Y9 468 aa21.74■■□□□ 1.07
MBD3-209ENST00000592012 LPAR1Q92633 364 aa21.74■■□□□ 1.07
MBD3-209ENST00000592012 PUF60Q9UHX1 559 aaKnown RBP21.74■■□□□ 1.07
MBD3-209ENST00000592012 TBCAO75347 108 aaKnown RBP21.74■■□□□ 1.07
MBD3-209ENST00000592012 LCA5LO95447 670 aa21.74■■□□□ 1.07
MBD3-209ENST00000592012 TFRCP02786 760 aaKnown RBP21.74■■□□□ 1.07
MBD3-209ENST00000592012 ZSCAN20P17040 1043 aaPredicted RBP21.74■■□□□ 1.07
MBD3-209ENST00000592012 VAV2P52735 878 aa21.74■■□□□ 1.07
MBD3-209ENST00000592012 PDXDC1Q6P996 788 aa21.74■■□□□ 1.07
MBD3-209ENST00000592012 CACNA2D4Q7Z3S7 1137 aa21.74■■□□□ 1.07
MBD3-209ENST00000592012 CLEC4DQ8WXI8 215 aa21.74■■□□□ 1.07
MBD3-209ENST00000592012 WDR11Q9BZH6 1224 aa21.74■■□□□ 1.07
MBD3-209ENST00000592012 KIAA1683Q9H0B3 1180 aa21.74■■□□□ 1.07
MBD3-209ENST00000592012 OLFML3Q9NRN5 406 aa21.74■■□□□ 1.07
MBD3-209ENST00000592012 ARGLU1Q9NWB6 273 aaPredicted RBP21.74■■□□□ 1.07
MBD3-209ENST00000592012 MYO6Q9UM54 1294 aa21.74■■□□□ 1.07
MBD3-209ENST00000592012 DUSP10Q9Y6W6 482 aa21.74■■□□□ 1.07
MBD3-209ENST00000592012 MUTP22033 750 aa21.73■■□□□ 1.07
MBD3-209ENST00000592012 RPS12P25398 132 aaKnown RBP21.73■■□□□ 1.07
MBD3-209ENST00000592012 EIF4A3P38919 411 aaKnown RBP21.73■■□□□ 1.07
MBD3-209ENST00000592012 SPA17Q15506 151 aa21.73■■□□□ 1.07
MBD3-209ENST00000592012 EHBP1Q8NDI1 1231 aa21.73■■□□□ 1.07
MBD3-209ENST00000592012 PURBQ96QR8 312 aaKnown RBP21.73■■□□□ 1.07
MBD3-209ENST00000592012 MXRA8Q9BRK3 442 aa21.73■■□□□ 1.07
MBD3-209ENST00000592012 UNC45AQ9H3U1 944 aa21.73■■□□□ 1.07
MBD3-209ENST00000592012 FAM53CQ9NYF3 392 aa21.73■■□□□ 1.07
MBD3-209ENST00000592012 CEP72Q9P209 647 aa21.73■■□□□ 1.07
MBD3-209ENST00000592012 COL20A1Q9P218 1284 aa21.73■■□□□ 1.07
MBD3-209ENST00000592012 BRCA1P38398 1863 aaKnown RBP21.73■■□□□ 1.07
MBD3-209ENST00000592012 SFI1A8K8P3 1242 aa21.73■■□□□ 1.07
MBD3-209ENST00000592012 IPO5O00410 1097 aaKnown RBP21.73■■□□□ 1.07
MBD3-209ENST00000592012 NFIBO00712 420 aa21.73■■□□□ 1.07
MBD3-209ENST00000592012 ITGB5P18084 799 aa21.73■■□□□ 1.07
MBD3-209ENST00000592012 KIF11P52732 1056 aa21.73■■□□□ 1.07
MBD3-209ENST00000592012 WHAMMP3Q1A5X7 153 aa21.73■■□□□ 1.07
MBD3-209ENST00000592012 GLIPR1L2Q4G1C9 344 aa21.73■■□□□ 1.07
MBD3-209ENST00000592012 WRAP73Q9P2S5 460 aaPredicted RBP21.73■■□□□ 1.07
MBD3-209ENST00000592012 RBBP6Q7Z6E9 1792 aaKnown RBP21.73■■□□□ 1.07
MBD3-209ENST00000592012 GAP43P17677 238 aa21.72■■□□□ 1.07
MBD3-209ENST00000592012 KCNH2Q12809 1159 aa21.72■■□□□ 1.07
MBD3-209ENST00000592012 KIF5AQ12840 1032 aa21.72■■□□□ 1.07
MBD3-209ENST00000592012 DGKZQ13574 1117 aa21.72■■□□□ 1.07
MBD3-209ENST00000592012 FRMD5Q7Z6J6 570 aa21.72■■□□□ 1.07
MBD3-209ENST00000592012 HOOK2Q96ED9 719 aa21.72■■□□□ 1.07
MBD3-209ENST00000592012 CRACR2AQ9BSW2 395 aa21.72■■□□□ 1.07
MBD3-209ENST00000592012 CALUO43852 315 aaPredicted RBP21.72■■□□□ 1.07
MBD3-209ENST00000592012 CTNND1O60716 968 aaKnown RBP21.72■■□□□ 1.07
MBD3-209ENST00000592012 EPHA7Q15375 998 aa21.72■■□□□ 1.07
MBD3-209ENST00000592012 HGSNATQ68CP4 663 aa21.72■■□□□ 1.07
MBD3-209ENST00000592012 TRAPPC11Q7Z392 1133 aa21.72■■□□□ 1.07
MBD3-209ENST00000592012 NACC1Q96RE7 527 aa21.72■■□□□ 1.07
MBD3-209ENST00000592012 PARD6BQ9BYG5 372 aa21.72■■□□□ 1.07
MBD3-209ENST00000592012 NLRC4Q9NPP4 1024 aa21.72■■□□□ 1.07
MBD3-209ENST00000592012 TYW1Q9NV66 732 aaKnown RBP21.72■■□□□ 1.07
MBD3-209ENST00000592012 ASTN2O75129 1339 aaPredicted RBP21.71■■□□□ 1.07
MBD3-209ENST00000592012 RPTORQ8N122 1335 aa21.71■■□□□ 1.07
MBD3-209ENST00000592012 ENC1O14682 589 aa21.71■■□□□ 1.07
MBD3-209ENST00000592012 GCNT3O95395 438 aa21.71■■□□□ 1.07
MBD3-209ENST00000592012 GHRHRQ02643 423 aa21.71■■□□□ 1.07
MBD3-209ENST00000592012 KCNA1Q09470 495 aa21.71■■□□□ 1.07
MBD3-209ENST00000592012 ASTE1Q2TB18 679 aaPredicted RBP21.71■■□□□ 1.07
MBD3-209ENST00000592012 SAMD7Q7Z3H4 446 aa21.71■■□□□ 1.07
MBD3-209ENST00000592012 SYN2Q92777 582 aaPredicted RBP21.71■■□□□ 1.07
MBD3-209ENST00000592012 RIT2Q99578 217 aa21.71■■□□□ 1.07
MBD3-209ENST00000592012 LSM14BQ9BX40 385 aaKnown RBP21.71■■□□□ 1.07
MBD3-209ENST00000592012 TEKT3Q9BXF9 490 aa21.71■■□□□ 1.07
MBD3-209ENST00000592012 GINM1Q9NU53 330 aa21.71■■□□□ 1.07
MBD3-209ENST00000592012 PCDHA13Q9Y5I0 950 aa21.71■■□□□ 1.07
MBD3-209ENST00000592012 ZRANB2O95218 330 aaKnown RBP eCLIP21.7■■□□□ 1.07
MBD3-209ENST00000592012 CPXCR1Q8N123 301 aa21.7■■□□□ 1.07
MBD3-209ENST00000592012 IFIH1Q9BYX4 1025 aaKnown RBP21.7■■□□□ 1.07
MBD3-209ENST00000592012 TSGA10Q9BZW7 698 aa21.7■■□□□ 1.07
MBD3-209ENST00000592012 NUCKS1Q9H1E3 243 aaKnown RBP21.7■■□□□ 1.07
MBD3-209ENST00000592012 DEF6Q9H4E7 631 aa21.7■■□□□ 1.07
MBD3-209ENST00000592012 SLC38A10Q9HBR0 1119 aa21.7■■□□□ 1.07
MBD3-209ENST00000592012 ASTN1O14525 1302 aa21.7■■□□□ 1.06
MBD3-209ENST00000592012 BCRP11274 1271 aa21.7■■□□□ 1.06
MBD3-209ENST00000592012 MAPK8IP2Q13387 824 aaPredicted RBP21.7■■□□□ 1.06
MBD3-209ENST00000592012 PAPD7Q5XG87 772 aaKnown RBP21.7■■□□□ 1.06
MBD3-209ENST00000592012 TMCO3Q6UWJ1 677 aa21.7■■□□□ 1.06
MBD3-209ENST00000592012 MICALL2Q8IY33 904 aa21.7■■□□□ 1.06
MBD3-209ENST00000592012 HDAC6Q9UBN7 1215 aa21.7■■□□□ 1.06
MBD3-209ENST00000592012 ARMCX3Q9UH62 379 aaPredicted RBP21.7■■□□□ 1.06
MBD3-209ENST00000592012 AKR1B10O60218 316 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms