RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 RPS6KA2Q15349 733 aa14.41□□□□□ -0.1
SMARCA4-216ENST00000591545 EXOC3L4Q17RC7 722 aa14.41□□□□□ -0.1
SMARCA4-216ENST00000591545 NSUN7Q8NE18 718 aaKnown RBP14.41□□□□□ -0.1
SMARCA4-216ENST00000591545 NLRP4Q96MN2 994 aa14.41□□□□□ -0.1
SMARCA4-216ENST00000591545 TUBGCP2Q9BSJ2 902 aa14.41□□□□□ -0.1
SMARCA4-216ENST00000591545 PCDHA5Q9Y5H7 936 aa14.41□□□□□ -0.1
SMARCA4-216ENST00000591545 CAMTA2O94983 1202 aa14.41□□□□□ -0.1
SMARCA4-216ENST00000591545 MTMR1Q13613 665 aa14.41□□□□□ -0.1
SMARCA4-216ENST00000591545 PI4K2BQ8TCG2 481 aa14.41□□□□□ -0.1
SMARCA4-216ENST00000591545 TBC1D22BQ9NU19 505 aa14.41□□□□□ -0.1
SMARCA4-216ENST00000591545 SLC12A6Q9UHW9 1150 aa14.41□□□□□ -0.1
SMARCA4-216ENST00000591545 CLIC4Q9Y696 253 aa14.41□□□□□ -0.1
SMARCA4-216ENST00000591545 CD163L1Q9NR16 1453 aa14.41□□□□□ -0.1
SMARCA4-216ENST00000591545 GUCY2DQ02846 1103 aa14.41□□□□□ -0.1
SMARCA4-216ENST00000591545 ZNF827Q17R98 1081 aa14.41□□□□□ -0.1
SMARCA4-216ENST00000591545 ELP3Q9H9T3 547 aa14.41□□□□□ -0.1
SMARCA4-216ENST00000591545 PARVGQ9HBI0 331 aa14.41□□□□□ -0.1
SMARCA4-216ENST00000591545 NOC2LQ9Y3T9 749 aaKnown RBP14.41□□□□□ -0.1
SMARCA4-216ENST00000591545 K7ERI5 159 aa14.41□□□□□ -0.1
SMARCA4-216ENST00000591545 SRGAP2CP0DJJ0 459 aa14.41□□□□□ -0.1
SMARCA4-216ENST00000591545 DPEP1P16444 411 aa14.41□□□□□ -0.1
SMARCA4-216ENST00000591545 XPAP23025 273 aaPredicted RBP14.41□□□□□ -0.1
SMARCA4-216ENST00000591545 NR2F2P24468 414 aa14.41□□□□□ -0.1
SMARCA4-216ENST00000591545 RPS12P25398 132 aaKnown RBP14.41□□□□□ -0.1
SMARCA4-216ENST00000591545 GAS2L3Q86XJ1 694 aa14.41□□□□□ -0.1
SMARCA4-216ENST00000591545 SLC35F6Q8N357 371 aa14.41□□□□□ -0.1
SMARCA4-216ENST00000591545 C7orf31Q8N865 590 aa14.41□□□□□ -0.1
SMARCA4-216ENST00000591545 THEGQ9P2T0 379 aa14.41□□□□□ -0.1
SMARCA4-216ENST00000591545 JRKLQ9Y4A0 524 aa14.41□□□□□ -0.1
SMARCA4-216ENST00000591545 PCDHB4Q9Y5E5 795 aa14.41□□□□□ -0.1
SMARCA4-216ENST00000591545 ANXA13P27216 316 aa14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 CASP14P31944 242 aa14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 LIG3P49916 1009 aa14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 BFSP1Q12934 665 aa14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 DBN1Q16643 649 aa14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 HSP90AA5PQ58FG0 334 aa14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 CDKL2Q92772 493 aa14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 CNOT10Q9H9A5 744 aaKnown RBP14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 RPF1Q9H9Y2 349 aaKnown RBP14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 F5H6K3 240 aa14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 CSPG5O95196 566 aa14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 GCKP35557 465 aa14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 KLRC3Q07444 240 aa14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 C10orf76Q5T2E6 689 aa14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 SLFN12LQ6IEE8 588 aa14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 GPIHBP1Q8IV16 184 aa14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 PLA2G12BQ9BX93 195 aa14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 INTS9Q9NV88 658 aaKnown RBP14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 RCOR1Q9UKL0 485 aa14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 PCDHA6Q9UN73 950 aa14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 PCDHA8Q9Y5H6 950 aa14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 DEPDC5O75140 1603 aa14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 SATB1Q01826 763 aa14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 FAM186BQ8IYM0 893 aa14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 ZNF34Q8IZ26 560 aa14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 MTIF3Q9H2K0 278 aaKnown RBP14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 ZFYVE28Q9HCC9 887 aa14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 ADGRB1O14514 1584 aa14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 ZBBXA8MT70 800 aa14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 MEIS1O00470 390 aa14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 PFDN6O15212 129 aa14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 KRT3P12035 628 aa14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 KRT76Q01546 638 aa14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 SNAPC2Q13487 334 aa14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 EXOC4Q96A65 974 aa14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 FAM149B1Q96BN6 582 aa14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 TACO1Q9BSH4 297 aaKnown RBP14.4□□□□□ -0.1
SMARCA4-216ENST00000591545 NCOA3Q9Y6Q9 1424 aa14.39□□□□□ -0.11
SMARCA4-216ENST00000591545 VWDEQ8N2E2 1590 aa14.39□□□□□ -0.11
SMARCA4-216ENST00000591545 STMN1P16949 149 aa14.39□□□□□ -0.11
SMARCA4-216ENST00000591545 ITKQ08881 620 aa14.39□□□□□ -0.11
SMARCA4-216ENST00000591545 PPP1R18Q6NYC8 613 aa14.39□□□□□ -0.11
SMARCA4-216ENST00000591545 DSTYKQ6XUX3 929 aa14.39□□□□□ -0.11
SMARCA4-216ENST00000591545 DEFB132Q7Z7B7 95 aa14.39□□□□□ -0.11
SMARCA4-216ENST00000591545 MAP7D3Q8IWC1 876 aa14.39□□□□□ -0.11
SMARCA4-216ENST00000591545 PARK7Q99497 189 aaKnown RBP14.39□□□□□ -0.11
SMARCA4-216ENST00000591545 WDR64B1ANS9 1081 aa14.39□□□□□ -0.11
SMARCA4-216ENST00000591545 PKP1Q13835 747 aa14.39□□□□□ -0.11
SMARCA4-216ENST00000591545 MAN2A1Q16706 1144 aa14.39□□□□□ -0.11
SMARCA4-216ENST00000591545 RSBN1LQ6PCB5 846 aaPredicted RBP14.39□□□□□ -0.11
SMARCA4-216ENST00000591545 MCPH1Q8NEM0 835 aa14.39□□□□□ -0.11
SMARCA4-216ENST00000591545 CFAP61Q8NHU2 1237 aa14.39□□□□□ -0.11
SMARCA4-216ENST00000591545 PRPF31Q8WWY3 499 aaKnown RBP14.39□□□□□ -0.11
SMARCA4-216ENST00000591545 PPP1R16BQ96T49 567 aa14.39□□□□□ -0.11
SMARCA4-216ENST00000591545 MTA3Q9BTC8 594 aa14.39□□□□□ -0.11
SMARCA4-216ENST00000591545 CACYBPQ9HB71 228 aaKnown RBP14.39□□□□□ -0.11
SMARCA4-216ENST00000591545 SPDYE16A6NNV3 312 aaPredicted RBP14.39□□□□□ -0.11
SMARCA4-216ENST00000591545 SPDYE2Q495Y8 402 aa14.39□□□□□ -0.11
SMARCA4-216ENST00000591545 RINT1Q6NUQ1 792 aa14.39□□□□□ -0.11
SMARCA4-216ENST00000591545 TMTC3Q6ZXV5 915 aa14.39□□□□□ -0.11
SMARCA4-216ENST00000591545 ZBTB33Q86T24 672 aa14.39□□□□□ -0.11
SMARCA4-216ENST00000591545 ENOX1Q8TC92 643 aaKnown RBP14.39□□□□□ -0.11
SMARCA4-216ENST00000591545 PBKQ96KB5 322 aa14.39□□□□□ -0.11
SMARCA4-216ENST00000591545 TUBB6Q9BUF5 446 aa14.39□□□□□ -0.11
SMARCA4-216ENST00000591545 PTPRUQ92729 1446 aa14.39□□□□□ -0.11
SMARCA4-216ENST00000591545 IQSEC2Q5JU85 1478 aa14.39□□□□□ -0.11
SMARCA4-216ENST00000591545 C19orf81C9J6K1 198 aa14.39□□□□□ -0.11
SMARCA4-216ENST00000591545 ARMCX2Q7L311 632 aa14.39□□□□□ -0.11
SMARCA4-216ENST00000591545 P2RX5Q93086 422 aa14.39□□□□□ -0.11
SMARCA4-216ENST00000591545 CEP95Q96GE4 821 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms