RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 SMARCAD1Q9H4L7 1026 aa20.69■□□□□ 0.9
DDX39A-212ENST00000590260 ERAP1Q9NZ08 941 aa20.69■□□□□ 0.9
DDX39A-212ENST00000590260 SLC37A4O43826 429 aa20.68■□□□□ 0.9
DDX39A-212ENST00000590260 FOSBP53539 338 aa20.68■□□□□ 0.9
DDX39A-212ENST00000590260 SMAD3P84022 425 aaKnown RBP20.68■□□□□ 0.9
DDX39A-212ENST00000590260 NONOQ15233 471 aaKnown RBP eCLIP20.68■□□□□ 0.92e-7■■■□□ 16.3
DDX39A-212ENST00000590260 B3GNT9Q6UX72 402 aa20.68■□□□□ 0.9
DDX39A-212ENST00000590260 KRT25Q7Z3Z0 450 aa20.68■□□□□ 0.9
DDX39A-212ENST00000590260 RETREG2Q8NC44 543 aa20.68■□□□□ 0.9
DDX39A-212ENST00000590260 GLG1Q92896 1179 aa20.68■□□□□ 0.9
DDX39A-212ENST00000590260 WNT7AO00755 349 aa20.67■□□□□ 0.9
DDX39A-212ENST00000590260 CXCL10P02778 98 aa20.67■□□□□ 0.9
DDX39A-212ENST00000590260 INSRRP14616 1297 aa20.67■□□□□ 0.9
DDX39A-212ENST00000590260 RFC2P35250 354 aa20.67■□□□□ 0.9
DDX39A-212ENST00000590260 GRIK4Q16099 956 aa20.67■□□□□ 0.9
DDX39A-212ENST00000590260 PLPPR4Q7Z2D5 763 aa20.67■□□□□ 0.9
DDX39A-212ENST00000590260 ETNPPLQ8TBG4 499 aa20.67■□□□□ 0.9
DDX39A-212ENST00000590260 TRAPPC12Q8WVT3 735 aa20.67■□□□□ 0.9
DDX39A-212ENST00000590260 TBC1D22BQ9NU19 505 aa20.67■□□□□ 0.9
DDX39A-212ENST00000590260 GTF3C3Q9Y5Q9 886 aa20.67■□□□□ 0.9
DDX39A-212ENST00000590260 NRCAMQ92823 1304 aa20.67■□□□□ 0.9
DDX39A-212ENST00000590260 MBLAC1A4D2B0 266 aaPredicted RBP20.66■□□□□ 0.9
DDX39A-212ENST00000590260 PSMD10O75832 226 aa20.66■□□□□ 0.9
DDX39A-212ENST00000590260 PBX2P40425 430 aa20.66■□□□□ 0.9
DDX39A-212ENST00000590260 STAT5BP51692 787 aa20.66■□□□□ 0.9
DDX39A-212ENST00000590260 PPFIA1Q13136 1202 aa20.66■□□□□ 0.9
DDX39A-212ENST00000590260 RABEP1Q15276 862 aa20.66■□□□□ 0.9
DDX39A-212ENST00000590260 KRT40Q6A162 431 aa20.66■□□□□ 0.9
DDX39A-212ENST00000590260 ZNF746Q6NUN9 644 aaPredicted RBP20.66■□□□□ 0.9
DDX39A-212ENST00000590260 MOXD1Q6UVY6 613 aa20.66■□□□□ 0.9
DDX39A-212ENST00000590260 RPUSD2Q8IZ73 545 aaKnown RBP20.66■□□□□ 0.9
DDX39A-212ENST00000590260 CCDC155Q8N6L0 562 aa20.66■□□□□ 0.9
DDX39A-212ENST00000590260 WASF1Q92558 559 aa20.66■□□□□ 0.9
DDX39A-212ENST00000590260 TTYH1Q9H313 450 aaPredicted RBP20.66■□□□□ 0.9
DDX39A-212ENST00000590260 ZBTB42B2RXF5 422 aa20.65■□□□□ 0.9
DDX39A-212ENST00000590260 BTBD18B2RXH4 712 aa20.65■□□□□ 0.9
DDX39A-212ENST00000590260 MMP1P03956 469 aa20.65■□□□□ 0.9
DDX39A-212ENST00000590260 PFKMP08237 780 aa20.65■□□□□ 0.9
DDX39A-212ENST00000590260 THPOP40225 353 aa20.65■□□□□ 0.9
DDX39A-212ENST00000590260 SWSAP1Q6NVH7 229 aa20.65■□□□□ 0.9
DDX39A-212ENST00000590260 PIK3AP1Q6ZUJ8 805 aa20.65■□□□□ 0.9
DDX39A-212ENST00000590260 ZSCAN31Q96LW9 406 aaPredicted RBP20.65■□□□□ 0.9
DDX39A-212ENST00000590260 UNC45AQ9H3U1 944 aa20.65■□□□□ 0.9
DDX39A-212ENST00000590260 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.64■□□□□ 0.89
DDX39A-212ENST00000590260 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.64■□□□□ 0.89
DDX39A-212ENST00000590260 XBP1P17861 261 aa20.64■□□□□ 0.89
DDX39A-212ENST00000590260 KRT2P35908 639 aa20.64■□□□□ 0.89
DDX39A-212ENST00000590260 LETM2Q2VYF4 491 aa20.64■□□□□ 0.89
DDX39A-212ENST00000590260 RIT2Q99578 217 aa20.64■□□□□ 0.89
DDX39A-212ENST00000590260 LLPHQ9BRT6 129 aaKnown RBP20.64■□□□□ 0.89
DDX39A-212ENST00000590260 BACH2Q9BYV9 841 aa20.64■□□□□ 0.89
DDX39A-212ENST00000590260 AZI2Q9H6S1 392 aa20.64■□□□□ 0.89
DDX39A-212ENST00000590260 MAFBQ9Y5Q3 323 aaPredicted RBP20.64■□□□□ 0.89
DDX39A-212ENST00000590260 IGSF9BQ9UPX0 1349 aa20.63■□□□□ 0.89
DDX39A-212ENST00000590260 CHD9Q3L8U1 2897 aa20.63■□□□□ 0.89
DDX39A-212ENST00000590260 CCDC194A0A1B0GVG4 234 aa20.63■□□□□ 0.89
DDX39A-212ENST00000590260 ZNF862O60290 1169 aa20.63■□□□□ 0.89
DDX39A-212ENST00000590260 CTSHP09668 335 aa20.63■□□□□ 0.89
DDX39A-212ENST00000590260 GNAT1P11488 350 aa20.63■□□□□ 0.89
DDX39A-212ENST00000590260 IGBP1P78318 339 aa20.63■□□□□ 0.89
DDX39A-212ENST00000590260 KRT76Q01546 638 aa20.63■□□□□ 0.89
DDX39A-212ENST00000590260 GUCY1B3Q02153 619 aa20.63■□□□□ 0.89
DDX39A-212ENST00000590260 MGAT3Q09327 533 aa20.63■□□□□ 0.89
DDX39A-212ENST00000590260 MKRN4PQ13434 485 aaPredicted RBP20.63■□□□□ 0.89
DDX39A-212ENST00000590260 UGCGQ16739 394 aa20.63■□□□□ 0.89
DDX39A-212ENST00000590260 FAM26DQ5JW98 314 aa20.63■□□□□ 0.89
DDX39A-212ENST00000590260 NEK8Q86SG6 692 aa20.63■□□□□ 0.89
DDX39A-212ENST00000590260 DIS3L2Q8IYB7 885 aaKnown RBP20.63■□□□□ 0.89
DDX39A-212ENST00000590260 DEFB123Q8N688 67 aa20.63■□□□□ 0.89
DDX39A-212ENST00000590260 PBX4Q9BYU1 374 aa20.63■□□□□ 0.89
DDX39A-212ENST00000590260 KCNMB3Q9NPA1 279 aa20.63■□□□□ 0.89
DDX39A-212ENST00000590260 ZNF302Q9NR11 478 aa20.63■□□□□ 0.89
DDX39A-212ENST00000590260 SH2B1Q9NRF2 756 aaPredicted RBP20.63■□□□□ 0.89
DDX39A-212ENST00000590260 MTMR10Q9NXD2 777 aa20.63■□□□□ 0.89
DDX39A-212ENST00000590260 TUBE1Q9UJT0 475 aa20.63■□□□□ 0.89
DDX39A-212ENST00000590260 KAT6AQ92794 2004 aa20.63■□□□□ 0.89
DDX39A-212ENST00000590260 POTEB3A0JP26 581 aa20.62■□□□□ 0.89
DDX39A-212ENST00000590260 RSPH10B2B2RC85 870 aa20.62■□□□□ 0.89
DDX39A-212ENST00000590260 CHRNA1P02708 482 aa20.62■□□□□ 0.89
DDX39A-212ENST00000590260 RSPH10BP0C881 870 aa20.62■□□□□ 0.89
DDX39A-212ENST00000590260 LRCH2Q5VUJ6 765 aa20.62■□□□□ 0.89
DDX39A-212ENST00000590260 PPP4R3AQ6IN85 833 aa20.62■□□□□ 0.89
DDX39A-212ENST00000590260 MIS18BP1Q6P0N0 1132 aa20.62■□□□□ 0.89
DDX39A-212ENST00000590260 POTEBQ6S5H4 581 aa20.62■□□□□ 0.89
DDX39A-212ENST00000590260 RPAINQ86UA6 219 aa20.62■□□□□ 0.89
DDX39A-212ENST00000590260 SMAP1Q8IYB5 467 aaPredicted RBP20.62■□□□□ 0.89
DDX39A-212ENST00000590260 ATP8B4Q8TF62 1192 aa20.62■□□□□ 0.89
DDX39A-212ENST00000590260 HAS1Q92839 578 aa20.62■□□□□ 0.89
DDX39A-212ENST00000590260 GUCD1Q96NT3 240 aa20.62■□□□□ 0.89
DDX39A-212ENST00000590260 DDX25Q9UHL0 483 aaKnown RBP20.62■□□□□ 0.89
DDX39A-212ENST00000590260 TRPC6Q9Y210 931 aa20.62■□□□□ 0.89
DDX39A-212ENST00000590260 YBX2Q9Y2T7 364 aaKnown RBP20.62■□□□□ 0.89
DDX39A-212ENST00000590260 PCDHA10Q9Y5I2 948 aa20.62■□□□□ 0.89
DDX39A-212ENST00000590260 BACH1O14867 736 aa20.61■□□□□ 0.89
DDX39A-212ENST00000590260 GAS7O60861 476 aa20.61■□□□□ 0.89
DDX39A-212ENST00000590260 DNAJB2P25686 324 aa20.61■□□□□ 0.89
DDX39A-212ENST00000590260 RABGGTBP53611 331 aa20.61■□□□□ 0.89
DDX39A-212ENST00000590260 PDXDC2PQ6P474 469 aa20.61■□□□□ 0.89
DDX39A-212ENST00000590260 POTEDQ86YR6 584 aa20.61■□□□□ 0.89
DDX39A-212ENST00000590260 FAM161BQ96MY7 647 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms