RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 KRT32Q14532 448 aa20.59■□□□□ 0.89
H3F3B-209ENST00000589949 LPIN1Q14693 890 aa20.59■□□□□ 0.89
H3F3B-209ENST00000589949 CEP55Q53EZ4 464 aa20.59■□□□□ 0.89
H3F3B-209ENST00000589949 TRAPPC12Q8WVT3 735 aa20.59■□□□□ 0.89
H3F3B-209ENST00000589949 DNAJB3Q8WWF6 145 aa20.59■□□□□ 0.89
H3F3B-209ENST00000589949 IFIH1Q9BYX4 1025 aaKnown RBP20.59■□□□□ 0.89
H3F3B-209ENST00000589949 AGO4Q9HCK5 861 aaKnown RBP20.59■□□□□ 0.89
H3F3B-209ENST00000589949 TUBE1Q9UJT0 475 aa20.59■□□□□ 0.89
H3F3B-209ENST00000589949 MEIS1O00470 390 aa20.58■□□□□ 0.89
H3F3B-209ENST00000589949 CCNE2O96020 404 aa20.58■□□□□ 0.89
H3F3B-209ENST00000589949 HSPA4P34932 840 aa20.58■□□□□ 0.89
H3F3B-209ENST00000589949 SREBF1P36956 1147 aa20.58■□□□□ 0.89
H3F3B-209ENST00000589949 ACTR2P61160 394 aa20.58■□□□□ 0.89
H3F3B-209ENST00000589949 IGBP1P78318 339 aa20.58■□□□□ 0.89
H3F3B-209ENST00000589949 TAF2Q6P1X5 1199 aa20.58■□□□□ 0.89
H3F3B-209ENST00000589949 Q6ZUG5 572 aa20.58■□□□□ 0.89
H3F3B-209ENST00000589949 CRYGNQ8WXF5 182 aa20.58■□□□□ 0.89
H3F3B-209ENST00000589949 JAKMIP1Q96N16 626 aaKnown RBP20.58■□□□□ 0.89
H3F3B-209ENST00000589949 UIMC1Q96RL1 719 aa20.58■□□□□ 0.89
H3F3B-209ENST00000589949 KAT6AQ92794 2004 aa20.58■□□□□ 0.88
H3F3B-209ENST00000589949 BDP1A6H8Y1 2624 aa20.57■□□□□ 0.88
H3F3B-209ENST00000589949 NFASCO94856 1347 aa20.57■□□□□ 0.88
H3F3B-209ENST00000589949 PPFIA3O75145 1194 aa20.57■□□□□ 0.88
H3F3B-209ENST00000589949 FOSP01100 380 aaPredicted RBP20.57■□□□□ 0.88
H3F3B-209ENST00000589949 RCAN1P53805 252 aa20.57■□□□□ 0.88
H3F3B-209ENST00000589949 PLCB4Q15147 1175 aa20.57■□□□□ 0.88
H3F3B-209ENST00000589949 PKN1Q16512 942 aa20.57■□□□□ 0.88
H3F3B-209ENST00000589949 PFKFB3Q16875 520 aaPredicted RBP20.57■□□□□ 0.88
H3F3B-209ENST00000589949 JAKMIP3Q5VZ66 844 aa20.57■□□□□ 0.88
H3F3B-209ENST00000589949 BRF1Q92994 677 aa20.57■□□□□ 0.88
H3F3B-209ENST00000589949 AGO3Q9H9G7 860 aaKnown RBP20.57■□□□□ 0.88
H3F3B-209ENST00000589949 LMCD1Q9NZU5 365 aa20.57■□□□□ 0.88
H3F3B-209ENST00000589949 NAP1L2Q9ULW6 460 aaPredicted RBP20.57■□□□□ 0.88
H3F3B-209ENST00000589949 FAM86B1E9PN63 330 aa20.56■□□□□ 0.88
H3F3B-209ENST00000589949 ATG7O95352 703 aa20.56■□□□□ 0.88
H3F3B-209ENST00000589949 HMGB1P09429 215 aaKnown RBP20.56■□□□□ 0.88
H3F3B-209ENST00000589949 FAM86B2P0C5J1 330 aa20.56■□□□□ 0.88
H3F3B-209ENST00000589949 LINC00271P0C7V0 271 aa20.56■□□□□ 0.88
H3F3B-209ENST00000589949 EPC2Q52LR7 807 aa20.56■□□□□ 0.88
H3F3B-209ENST00000589949 FBXO47Q5MNV8 452 aa20.56■□□□□ 0.88
H3F3B-209ENST00000589949 FBXO22Q8NEZ5 403 aa20.56■□□□□ 0.88
H3F3B-209ENST00000589949 APBB2Q92870 758 aa20.56■□□□□ 0.88
H3F3B-209ENST00000589949 HLA-CQ95604 372 aa20.56■□□□□ 0.88
H3F3B-209ENST00000589949 CDY2AQ9Y6F7 541 aa20.56■□□□□ 0.88
H3F3B-209ENST00000589949 IGLV3-22A0A075B6J6 115 aa20.55■□□□□ 0.88
H3F3B-209ENST00000589949 hCG_1984214I3L0E3 225 aa20.55■□□□□ 0.88
H3F3B-209ENST00000589949 DHX15O43143 795 aaKnown RBP20.55■□□□□ 0.88
H3F3B-209ENST00000589949 SCG2P13521 617 aa20.55■□□□□ 0.88
H3F3B-209ENST00000589949 METAP2P50579 478 aaKnown RBP eCLIP20.55■□□□□ 0.884e-7■■■□□ 15.1
H3F3B-209ENST00000589949 AP3B2Q13367 1082 aa20.55■□□□□ 0.88
H3F3B-209ENST00000589949 TEX2Q8IWB9 1127 aa20.55■□□□□ 0.88
H3F3B-209ENST00000589949 ZNF713Q8N859 430 aaPredicted RBP20.55■□□□□ 0.88
H3F3B-209ENST00000589949 LINC01599Q8WXQ3 324 aa20.55■□□□□ 0.88
H3F3B-209ENST00000589949 YME1L1Q96TA2 773 aa20.55■□□□□ 0.88
H3F3B-209ENST00000589949 AGXT2Q9BYV1 514 aa20.55■□□□□ 0.88
H3F3B-209ENST00000589949 FAM49AQ9H0Q0 323 aaPredicted RBP20.55■□□□□ 0.88
H3F3B-209ENST00000589949 COG5Q9UP83 839 aa20.55■□□□□ 0.88
H3F3B-209ENST00000589949 IGKV6D-21A0A0A0MT36 114 aa20.54■□□□□ 0.88
H3F3B-209ENST00000589949 DDX39AO00148 427 aaKnown RBP20.54■□□□□ 0.88
H3F3B-209ENST00000589949 ENPP3O14638 875 aa20.54■□□□□ 0.88
H3F3B-209ENST00000589949 MRPS6P82932 125 aaKnown RBP20.54■□□□□ 0.88
H3F3B-209ENST00000589949 NTRK3Q16288 839 aa20.54■□□□□ 0.88
H3F3B-209ENST00000589949 AAK1Q2M2I8 961 aa20.54■□□□□ 0.88
H3F3B-209ENST00000589949 PLPPR4Q7Z2D5 763 aa20.54■□□□□ 0.88
H3F3B-209ENST00000589949 RTN4RL1Q86UN2 441 aaPredicted RBP20.54■□□□□ 0.88
H3F3B-209ENST00000589949 PHKBQ93100 1093 aa20.54■□□□□ 0.88
H3F3B-209ENST00000589949 SDF4Q9BRK5 362 aa20.54■□□□□ 0.88
H3F3B-209ENST00000589949 NID2Q14112 1375 aa20.54■□□□□ 0.88
H3F3B-209ENST00000589949 BRWD1Q9NSI6 2320 aa20.54■□□□□ 0.88
H3F3B-209ENST00000589949 COL4A6Q14031 1691 aa20.54■□□□□ 0.88
H3F3B-209ENST00000589949 NCOR1O75376 2440 aa20.54■□□□□ 0.88
H3F3B-209ENST00000589949 EDIL3O43854 480 aa20.53■□□□□ 0.88
H3F3B-209ENST00000589949 RPS6KB1P23443 525 aa20.53■□□□□ 0.88
H3F3B-209ENST00000589949 STAT5BP51692 787 aa20.53■□□□□ 0.88
H3F3B-209ENST00000589949 FGD1P98174 961 aa20.53■□□□□ 0.88
H3F3B-209ENST00000589949 TMEM62Q0P6H9 643 aa20.53■□□□□ 0.88
H3F3B-209ENST00000589949 BLOC1S2Q6QNY1 142 aa20.53■□□□□ 0.88
H3F3B-209ENST00000589949 ABHD15Q6UXT9 468 aa20.53■□□□□ 0.88
H3F3B-209ENST00000589949 TMEM192Q8IY95 271 aa20.53■□□□□ 0.88
H3F3B-209ENST00000589949 FBXL16Q8N461 479 aa20.53■□□□□ 0.88
H3F3B-209ENST00000589949 IL27Q8NEV9 243 aa20.53■□□□□ 0.88
H3F3B-209ENST00000589949 CCDC136Q96JN2 1154 aa20.53■□□□□ 0.88
H3F3B-209ENST00000589949 ZMYND12Q9H0C1 365 aa20.53■□□□□ 0.88
H3F3B-209ENST00000589949 AZI2Q9H6S1 392 aa20.53■□□□□ 0.88
H3F3B-209ENST00000589949 RC3H2Q9HBD1 1191 aaKnown RBP20.53■□□□□ 0.88
H3F3B-209ENST00000589949 TRPC6Q9Y210 931 aa20.53■□□□□ 0.88
H3F3B-209ENST00000589949 RRN3P2A6NIE6 340 aa20.52■□□□□ 0.88
H3F3B-209ENST00000589949 PRPF3O43395 683 aaKnown RBP20.52■□□□□ 0.88
H3F3B-209ENST00000589949 CYP3A4P08684 503 aa20.52■□□□□ 0.88
H3F3B-209ENST00000589949 ATP4AP20648 1035 aa20.52■□□□□ 0.88
H3F3B-209ENST00000589949 CD52P31358 61 aa20.52■□□□□ 0.88
H3F3B-209ENST00000589949 NIPA1Q7RTP0 329 aa20.52■□□□□ 0.88
H3F3B-209ENST00000589949 RSPH3Q86UC2 560 aa20.52■□□□□ 0.88
H3F3B-209ENST00000589949 PLA2G4DQ86XP0 818 aa20.52■□□□□ 0.88
H3F3B-209ENST00000589949 CRIPAKQ8N1N5 446 aa20.52■□□□□ 0.88
H3F3B-209ENST00000589949 RASGRP4Q8TDF6 673 aa20.52■□□□□ 0.88
H3F3B-209ENST00000589949 NCOA5Q9HCD5 579 aaKnown RBP20.52■□□□□ 0.88
H3F3B-209ENST00000589949 PCDHA2Q9Y5H9 948 aa20.52■□□□□ 0.88
H3F3B-209ENST00000589949 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.51■□□□□ 0.87
H3F3B-209ENST00000589949 ESYT2A0FGR8 921 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms