RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 ABCB6Q9NP58 842 aa15.92■□□□□ 0.14
RETREG3-208ENST00000589797 PODXL2Q9NZ53 605 aa15.92■□□□□ 0.14
RETREG3-208ENST00000589797 CNOT7Q9UIV1 285 aaKnown RBP15.92■□□□□ 0.14
RETREG3-208ENST00000589797 ZNRF3Q9ULT6 936 aa15.92■□□□□ 0.14
RETREG3-208ENST00000589797 PRPF38AQ8NAV1 312 aaKnown RBP15.92■□□□□ 0.14
RETREG3-208ENST00000589797 RETREG2Q8NC44 543 aa15.92■□□□□ 0.14
RETREG3-208ENST00000589797 GIMAP8Q8ND71 665 aaPredicted RBP15.92■□□□□ 0.14
RETREG3-208ENST00000589797 REEP2Q9BRK0 252 aa15.92■□□□□ 0.14
RETREG3-208ENST00000589797 RNF146Q9NTX7 359 aa15.92■□□□□ 0.14
RETREG3-208ENST00000589797 ESYT3A0FGR9 886 aa15.92■□□□□ 0.14
RETREG3-208ENST00000589797 SRGAP2CP0DJJ0 459 aa15.92■□□□□ 0.14
RETREG3-208ENST00000589797 GRB10Q13322 594 aa15.92■□□□□ 0.14
RETREG3-208ENST00000589797 SAAL1Q96ER3 474 aa15.92■□□□□ 0.14
RETREG3-208ENST00000589797 NUCKS1Q9H1E3 243 aaKnown RBP15.92■□□□□ 0.14
RETREG3-208ENST00000589797 AMFRQ9UKV5 643 aa15.92■□□□□ 0.14
RETREG3-208ENST00000589797 CACNA1FO60840 1977 aa15.92■□□□□ 0.14
RETREG3-208ENST00000589797 ATP1A1P05023 1023 aaKnown RBP15.92■□□□□ 0.14
RETREG3-208ENST00000589797 MYBP10242 640 aa15.92■□□□□ 0.14
RETREG3-208ENST00000589797 PRPHP41219 470 aa15.92■□□□□ 0.14
RETREG3-208ENST00000589797 KNOP1Q1ED39 458 aaKnown RBP15.92■□□□□ 0.14
RETREG3-208ENST00000589797 PDXDC2PQ6P474 469 aa15.92■□□□□ 0.14
RETREG3-208ENST00000589797 NFRKBQ6P4R8 1299 aa15.92■□□□□ 0.14
RETREG3-208ENST00000589797 CCDC105Q8IYK2 499 aa15.92■□□□□ 0.14
RETREG3-208ENST00000589797 GLIS3Q8NEA6 775 aa15.92■□□□□ 0.14
RETREG3-208ENST00000589797 PLVAPQ9BX97 442 aa15.92■□□□□ 0.14
RETREG3-208ENST00000589797 SUGT1Q9Y2Z0 365 aa15.92■□□□□ 0.14
RETREG3-208ENST00000589797 A0A0U1RQJ8 604 aa15.91■□□□□ 0.14
RETREG3-208ENST00000589797 SSTR3P32745 418 aaPredicted RBP15.91■□□□□ 0.14
RETREG3-208ENST00000589797 APBA1Q02410 837 aa15.91■□□□□ 0.14
RETREG3-208ENST00000589797 MAP2K1Q02750 393 aaPredicted RBP15.91■□□□□ 0.14
RETREG3-208ENST00000589797 PSMD2Q13200 908 aa15.91■□□□□ 0.14
RETREG3-208ENST00000589797 ZNF394Q53GI3 561 aa15.91■□□□□ 0.14
RETREG3-208ENST00000589797 RSBN1LQ6PCB5 846 aaPredicted RBP15.91■□□□□ 0.14
RETREG3-208ENST00000589797 LRRN4CLQ8ND94 238 aa15.91■□□□□ 0.14
RETREG3-208ENST00000589797 PSMC6P62333 389 aa15.91■□□□□ 0.14
RETREG3-208ENST00000589797 LMBRD2Q68DH5 695 aaPredicted RBP15.91■□□□□ 0.14
RETREG3-208ENST00000589797 ZBTB33Q86T24 672 aa15.91■□□□□ 0.14
RETREG3-208ENST00000589797 CATSPER3Q86XQ3 398 aa15.91■□□□□ 0.14
RETREG3-208ENST00000589797 BBXQ8WY36 941 aaPredicted RBP15.91■□□□□ 0.14
RETREG3-208ENST00000589797 ZKSCAN4Q969J2 545 aaPredicted RBP15.91■□□□□ 0.14
RETREG3-208ENST00000589797 EPB41L5Q9HCM4 733 aa15.91■□□□□ 0.14
RETREG3-208ENST00000589797 NYAP2Q9P242 653 aa15.91■□□□□ 0.14
RETREG3-208ENST00000589797 LIMA1Q9UHB6 759 aaKnown RBP15.91■□□□□ 0.14
RETREG3-208ENST00000589797 GOLGA6CA6NDK9 693 aa15.91■□□□□ 0.14
RETREG3-208ENST00000589797 GOLGA6DP0CG33 693 aa15.91■□□□□ 0.14
RETREG3-208ENST00000589797 FAM76AQ8TAV0 307 aa15.91■□□□□ 0.14
RETREG3-208ENST00000589797 GOLGA6AQ9NYA3 693 aa15.91■□□□□ 0.14
RETREG3-208ENST00000589797 INO80B-WBP1J3KQ70 363 aa15.9■□□□□ 0.14
RETREG3-208ENST00000589797 ZBTB39O15060 712 aa15.9■□□□□ 0.14
RETREG3-208ENST00000589797 TCP1P17987 556 aaKnown RBP15.9■□□□□ 0.14
RETREG3-208ENST00000589797 SLC9A1P19634 815 aa15.9■□□□□ 0.14
RETREG3-208ENST00000589797 USP11P51784 963 aa15.9■□□□□ 0.14
RETREG3-208ENST00000589797 KCNB1Q14721 858 aa15.9■□□□□ 0.14
RETREG3-208ENST00000589797 IL17AQ16552 155 aa15.9■□□□□ 0.14
RETREG3-208ENST00000589797 DCUN1D2Q6PH85 259 aa15.9■□□□□ 0.14
RETREG3-208ENST00000589797 KCNK18Q7Z418 384 aa15.9■□□□□ 0.14
RETREG3-208ENST00000589797 FAM160B2Q86V87 743 aa15.9■□□□□ 0.14
RETREG3-208ENST00000589797 HOOK3Q86VS8 718 aa15.9■□□□□ 0.14
RETREG3-208ENST00000589797 IFT20Q8IY31 132 aa15.9■□□□□ 0.14
RETREG3-208ENST00000589797 KIFAP3Q92845 792 aa15.9■□□□□ 0.14
RETREG3-208ENST00000589797 FAM20AQ96MK3 541 aa15.9■□□□□ 0.14
RETREG3-208ENST00000589797 INO80BQ9C086 356 aaPredicted RBP15.9■□□□□ 0.14
RETREG3-208ENST00000589797 CALCOCO1Q9P1Z2 691 aa15.9■□□□□ 0.14
RETREG3-208ENST00000589797 CHORDC1Q9UHD1 332 aaPredicted RBP15.9■□□□□ 0.14
RETREG3-208ENST00000589797 CHD2O14647 1828 aaKnown RBP15.9■□□□□ 0.14
RETREG3-208ENST00000589797 PDIA5Q14554 519 aa15.9■□□□□ 0.14
RETREG3-208ENST00000589797 SEL1L2Q5TEA6 688 aa15.9■□□□□ 0.14
RETREG3-208ENST00000589797 MCTP2Q6DN12 878 aa15.9■□□□□ 0.14
RETREG3-208ENST00000589797 SWSAP1Q6NVH7 229 aa15.9■□□□□ 0.14
RETREG3-208ENST00000589797 ASIC3Q9UHC3 531 aa15.9■□□□□ 0.14
RETREG3-208ENST00000589797 OPA1O60313 960 aa15.9■□□□□ 0.14
RETREG3-208ENST00000589797 MED24O75448 989 aa15.9■□□□□ 0.14
RETREG3-208ENST00000589797 NPEPPSP55786 919 aa15.9■□□□□ 0.14
RETREG3-208ENST00000589797 MKRN4PQ13434 485 aaPredicted RBP15.9■□□□□ 0.14
RETREG3-208ENST00000589797 BAATQ14032 418 aaPredicted RBP15.9■□□□□ 0.14
RETREG3-208ENST00000589797 RPAP3Q9H6T3 665 aaPredicted RBP15.9■□□□□ 0.14
RETREG3-208ENST00000589797 HERC5Q9UII4 1024 aaKnown RBP15.9■□□□□ 0.14
RETREG3-208ENST00000589797 PTPN22Q9Y2R2 807 aa15.9■□□□□ 0.14
RETREG3-208ENST00000589797 PRELPP51888 382 aa15.89■□□□□ 0.13
RETREG3-208ENST00000589797 CAPN12Q6ZSI9 719 aa15.89■□□□□ 0.13
RETREG3-208ENST00000589797 CCDC26Q8TAB7 109 aa15.89■□□□□ 0.13
RETREG3-208ENST00000589797 PALMO75781 387 aa15.89■□□□□ 0.13
RETREG3-208ENST00000589797 TMOD1P28289 359 aa15.89■□□□□ 0.13
RETREG3-208ENST00000589797 BRD3Q15059 726 aa15.89■□□□□ 0.13
RETREG3-208ENST00000589797 AKT1S1Q96B36 256 aa15.89■□□□□ 0.13
RETREG3-208ENST00000589797 IFNB1P01574 187 aa15.89■□□□□ 0.13
RETREG3-208ENST00000589797 FUT2Q10981 343 aa15.89■□□□□ 0.13
RETREG3-208ENST00000589797 REXO1L1PQ8IX06 675 aa15.89■□□□□ 0.13
RETREG3-208ENST00000589797 SLC7A3Q8WY07 619 aa15.89■□□□□ 0.13
RETREG3-208ENST00000589797 ZDHHC15Q96MV8 337 aa15.89■□□□□ 0.13
RETREG3-208ENST00000589797 C7orf25Q9BPX7 421 aa15.89■□□□□ 0.13
RETREG3-208ENST00000589797 GABBR1Q9UBS5 961 aa15.89■□□□□ 0.13
RETREG3-208ENST00000589797 DNAJC12Q9UKB3 198 aa15.89■□□□□ 0.13
RETREG3-208ENST00000589797 STK24Q9Y6E0 443 aa15.89■□□□□ 0.13
RETREG3-208ENST00000589797 MXI1P50539 228 aa15.88■□□□□ 0.13
RETREG3-208ENST00000589797 CALCOCO2Q13137 446 aa15.88■□□□□ 0.13
RETREG3-208ENST00000589797 TUBB2AQ13885 445 aa15.88■□□□□ 0.13
RETREG3-208ENST00000589797 Q3C1V9 767 aa15.88■□□□□ 0.13
RETREG3-208ENST00000589797 CCDC170Q8IYT3 715 aa15.88■□□□□ 0.13
RETREG3-208ENST00000589797 TUBB2BQ9BVA1 445 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms