RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 LUC7L2Q9Y383 392 aaKnown RBP11.04□□□□□ -0.64
VPS25-202ENST00000589219 RBBP6Q7Z6E9 1792 aaKnown RBP11.03□□□□□ -0.64
VPS25-202ENST00000589219 CENPFP49454 3210 aa11.03□□□□□ -0.64
VPS25-202ENST00000589219 POTEB3A0JP26 581 aa11.03□□□□□ -0.64
VPS25-202ENST00000589219 GCOM1H8Y6P7 765 aaPredicted RBP11.03□□□□□ -0.64
VPS25-202ENST00000589219 OPLAHO14841 1288 aa11.03□□□□□ -0.64
VPS25-202ENST00000589219 IRF6O14896 467 aa11.03□□□□□ -0.64
VPS25-202ENST00000589219 TLR2O60603 784 aa11.03□□□□□ -0.64
VPS25-202ENST00000589219 POLR2MP0CAP2 368 aa11.03□□□□□ -0.64
VPS25-202ENST00000589219 MUTP22033 750 aa11.03□□□□□ -0.64
VPS25-202ENST00000589219 RPA1P27694 616 aa11.03□□□□□ -0.64
VPS25-202ENST00000589219 CAP2P40123 477 aa11.03□□□□□ -0.64
VPS25-202ENST00000589219 ERVK-24P63145 666 aa11.03□□□□□ -0.64
VPS25-202ENST00000589219 ZBED6P86452 979 aa11.03□□□□□ -0.64
VPS25-202ENST00000589219 SETQ01105 290 aaPredicted RBP11.03□□□□□ -0.64
VPS25-202ENST00000589219 MEA1Q16626 185 aa11.03□□□□□ -0.64
VPS25-202ENST00000589219 ZCWPW2Q504Y3 356 aa11.03□□□□□ -0.64
VPS25-202ENST00000589219 ARHGAP29Q52LW3 1261 aa11.03□□□□□ -0.64
VPS25-202ENST00000589219 PRR16Q569H4 304 aa11.03□□□□□ -0.64
VPS25-202ENST00000589219 FAM83BQ5T0W9 1011 aa11.03□□□□□ -0.64
VPS25-202ENST00000589219 POTEBQ6S5H4 581 aa11.03□□□□□ -0.64
VPS25-202ENST00000589219 GPBP1Q86WP2 473 aa11.03□□□□□ -0.64
VPS25-202ENST00000589219 CREBRFQ8IUR6 639 aa11.03□□□□□ -0.64
VPS25-202ENST00000589219 MNS1Q8NEH6 495 aa11.03□□□□□ -0.64
VPS25-202ENST00000589219 ZNF397Q8NF99 534 aaPredicted RBP11.03□□□□□ -0.64
VPS25-202ENST00000589219 TSC1Q92574 1164 aa11.03□□□□□ -0.64
VPS25-202ENST00000589219 KIFC2Q96AC6 838 aa11.03□□□□□ -0.64
VPS25-202ENST00000589219 MRPL44Q9H9J2 332 aaKnown RBP11.03□□□□□ -0.64
VPS25-202ENST00000589219 PANK4Q9NVE7 773 aa11.03□□□□□ -0.64
VPS25-202ENST00000589219 ZNHIT6Q9NWK9 470 aaKnown RBP11.03□□□□□ -0.64
VPS25-202ENST00000589219 ZNF112Q9UJU3 913 aa11.03□□□□□ -0.64
VPS25-202ENST00000589219 PNMA2Q9UL42 364 aa11.03□□□□□ -0.64
VPS25-202ENST00000589219 HTTP42858 3142 aa11.03□□□□□ -0.64
VPS25-202ENST00000589219 TTC26A0AVF1 554 aa11.02□□□□□ -0.65
VPS25-202ENST00000589219 BTBD19C9JJ37 291 aa11.02□□□□□ -0.65
VPS25-202ENST00000589219 MED24O75448 989 aa11.02□□□□□ -0.65
VPS25-202ENST00000589219 SLC34A2O95436 690 aa11.02□□□□□ -0.65
VPS25-202ENST00000589219 GNRH1P01148 92 aa11.02□□□□□ -0.65
VPS25-202ENST00000589219 CYP11B2P19099 503 aa11.02□□□□□ -0.65
VPS25-202ENST00000589219 TRIM21P19474 475 aaKnown RBP11.02□□□□□ -0.65
VPS25-202ENST00000589219 CYLC1P35663 651 aaPredicted RBP11.02□□□□□ -0.65
VPS25-202ENST00000589219 ZNF76P36508 570 aa11.02□□□□□ -0.65
VPS25-202ENST00000589219 SLC12A3P55017 1021 aa11.02□□□□□ -0.65
VPS25-202ENST00000589219 CDK17Q00537 523 aa11.02□□□□□ -0.65
VPS25-202ENST00000589219 TBC1D8BQ0IIM8 1120 aa11.02□□□□□ -0.65
VPS25-202ENST00000589219 MTF1Q14872 753 aa11.02□□□□□ -0.65
VPS25-202ENST00000589219 ECM1Q16610 540 aa11.02□□□□□ -0.65
VPS25-202ENST00000589219 VWA3BQ502W6 1294 aa11.02□□□□□ -0.65
VPS25-202ENST00000589219 MIIPQ5JXC2 388 aa11.02□□□□□ -0.65
VPS25-202ENST00000589219 PRPF38BQ5VTL8 546 aaKnown RBP11.02□□□□□ -0.65
VPS25-202ENST00000589219 NCAPH2Q6IBW4 605 aa11.02□□□□□ -0.65
VPS25-202ENST00000589219 ZNF662Q6ZS27 426 aa11.02□□□□□ -0.65
VPS25-202ENST00000589219 LRRC55Q6ZSA7 311 aa11.02□□□□□ -0.65
VPS25-202ENST00000589219 CCDC84Q86UT8 332 aaPredicted RBP11.02□□□□□ -0.65
VPS25-202ENST00000589219 ZC3H3Q8IXZ2 948 aaKnown RBP11.02□□□□□ -0.65
VPS25-202ENST00000589219 EHBP1Q8NDI1 1231 aa11.02□□□□□ -0.65
VPS25-202ENST00000589219 ACER1Q8TDN7 264 aa11.02□□□□□ -0.65
VPS25-202ENST00000589219 LPAR1Q92633 364 aa11.02□□□□□ -0.65
VPS25-202ENST00000589219 ARMC5Q96C12 935 aa11.02□□□□□ -0.65
VPS25-202ENST00000589219 POLR3CQ9BUI4 534 aaPredicted RBP11.02□□□□□ -0.65
VPS25-202ENST00000589219 EDEM3Q9BZQ6 932 aa11.02□□□□□ -0.65
VPS25-202ENST00000589219 VAV3Q9UKW4 847 aa11.02□□□□□ -0.65
VPS25-202ENST00000589219 KIAA1024Q9UPX6 916 aa11.02□□□□□ -0.65
VPS25-202ENST00000589219 FAM86B1E9PN63 330 aa11.01□□□□□ -0.65
VPS25-202ENST00000589219 WDR46O15213 610 aaKnown RBP11.01□□□□□ -0.65
VPS25-202ENST00000589219 MSH4O15457 936 aa11.01□□□□□ -0.65
VPS25-202ENST00000589219 URI1O94763 535 aaPredicted RBP11.01□□□□□ -0.65
VPS25-202ENST00000589219 IPO7O95373 1038 aaKnown RBP11.01□□□□□ -0.65
VPS25-202ENST00000589219 SSBP05455 408 aaKnown RBP eCLIP11.01□□□□□ -0.65
VPS25-202ENST00000589219 KRT18P05783 430 aaKnown RBP11.01□□□□□ -0.65
VPS25-202ENST00000589219 FAM86B2P0C5J1 330 aa11.01□□□□□ -0.65
VPS25-202ENST00000589219 INPP5BP32019 993 aa11.01□□□□□ -0.65
VPS25-202ENST00000589219 MARSP56192 900 aaKnown RBP11.01□□□□□ -0.65
VPS25-202ENST00000589219 SNAP25P60880 206 aa11.01□□□□□ -0.65
VPS25-202ENST00000589219 KRT83P78385 493 aa11.01□□□□□ -0.65
VPS25-202ENST00000589219 FKBP3Q00688 224 aaKnown RBP11.01□□□□□ -0.65
VPS25-202ENST00000589219 EDRF1Q3B7T1 1238 aa11.01□□□□□ -0.65
VPS25-202ENST00000589219 SLC9C1Q4G0N8 1177 aa11.01□□□□□ -0.65
VPS25-202ENST00000589219 NOL9Q5SY16 702 aaKnown RBP11.01□□□□□ -0.65
VPS25-202ENST00000589219 ANKRD23Q86SG2 305 aa11.01□□□□□ -0.65
VPS25-202ENST00000589219 CCDC170Q8IYT3 715 aa11.01□□□□□ -0.65
VPS25-202ENST00000589219 SPICE1Q8N0Z3 855 aa11.01□□□□□ -0.65
VPS25-202ENST00000589219 SYT2Q8N9I0 419 aaPredicted RBP11.01□□□□□ -0.65
VPS25-202ENST00000589219 NEK9Q8TD19 979 aa11.01□□□□□ -0.65
VPS25-202ENST00000589219 HPS3Q969F9 1004 aa11.01□□□□□ -0.65
VPS25-202ENST00000589219 P2RX7Q99572 595 aaKnown RBP11.01□□□□□ -0.65
VPS25-202ENST00000589219 TMEM106CQ9BVX2 250 aa11.01□□□□□ -0.65
VPS25-202ENST00000589219 CCDC94Q9BW85 323 aaPredicted RBP11.01□□□□□ -0.65
VPS25-202ENST00000589219 TUFT1Q9NNX1 390 aa11.01□□□□□ -0.65
VPS25-202ENST00000589219 DNM3Q9UQ16 869 aa11.01□□□□□ -0.65
VPS25-202ENST00000589219 COL4A3BPQ9Y5P4 624 aa11.01□□□□□ -0.65
VPS25-202ENST00000589219 MRFAP1Q9Y605 127 aa11.01□□□□□ -0.65
VPS25-202ENST00000589219 IGLV3-22A0A075B6J6 115 aa11□□□□□ -0.65
VPS25-202ENST00000589219 POTEFA5A3E0 1075 aa11□□□□□ -0.65
VPS25-202ENST00000589219 EFCAB8A8MWE9 144 aa11□□□□□ -0.65
VPS25-202ENST00000589219 E9PMD0 336 aa11□□□□□ -0.65
VPS25-202ENST00000589219 TADA3O75528 432 aa11□□□□□ -0.65
VPS25-202ENST00000589219 NDUFA10O95299 355 aa11□□□□□ -0.65
VPS25-202ENST00000589219 EYA4O95677 639 aa11□□□□□ -0.65
VPS25-202ENST00000589219 GAP43P17677 238 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms