RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 RNF214Q8ND24 703 aa24.86■■□□□ 1.57
ATG4D-209ENST00000588857 BANK1Q8NDB2 785 aa24.86■■□□□ 1.57
ATG4D-209ENST00000588857 NACC1Q96RE7 527 aa24.86■■□□□ 1.57
ATG4D-209ENST00000588857 LXNQ9BS40 222 aa24.86■■□□□ 1.57
ATG4D-209ENST00000588857 TRIM9Q9C026 710 aa24.86■■□□□ 1.57
ATG4D-209ENST00000588857 PCDHA10Q9Y5I2 948 aa24.86■■□□□ 1.57
ATG4D-209ENST00000588857 MYH9P35579 1960 aaKnown RBP24.86■■□□□ 1.57
ATG4D-209ENST00000588857 TNPO2O14787 897 aaKnown RBP24.85■■□□□ 1.57
ATG4D-209ENST00000588857 RPN1P04843 607 aaKnown RBP24.85■■□□□ 1.57
ATG4D-209ENST00000588857 UBA1P22314 1058 aaKnown RBP24.85■■□□□ 1.57
ATG4D-209ENST00000588857 PSMC6P62333 389 aa24.85■■□□□ 1.57
ATG4D-209ENST00000588857 MAMDC4Q6UXC1 1216 aa24.85■■□□□ 1.57
ATG4D-209ENST00000588857 CYFIP1Q7L576 1253 aa24.85■■□□□ 1.57
ATG4D-209ENST00000588857 CCDC47Q96A33 483 aaKnown RBP24.85■■□□□ 1.57
ATG4D-209ENST00000588857 ZSWIM4Q9H7M6 989 aa24.85■■□□□ 1.57
ATG4D-209ENST00000588857 GRPEL1Q9HAV7 217 aa24.85■■□□□ 1.57
ATG4D-209ENST00000588857 VTA1Q9NP79 307 aa24.85■■□□□ 1.57
ATG4D-209ENST00000588857 BMP2KQ9NSY1 1161 aaPredicted RBP24.85■■□□□ 1.57
ATG4D-209ENST00000588857 QARSP47897 775 aaKnown RBP24.84■■□□□ 1.57
ATG4D-209ENST00000588857 ASIC1P78348 528 aa24.84■■□□□ 1.57
ATG4D-209ENST00000588857 MORC3Q14149 939 aa24.84■■□□□ 1.57
ATG4D-209ENST00000588857 DPCR1Q3MIW9 517 aa24.84■■□□□ 1.57
ATG4D-209ENST00000588857 BCAS3Q9H6U6 928 aa24.84■■□□□ 1.57
ATG4D-209ENST00000588857 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.84■■□□□ 1.57
ATG4D-209ENST00000588857 TRIM17Q9Y577 477 aa24.84■■□□□ 1.57
ATG4D-209ENST00000588857 SORBS3O60504 671 aa24.84■■□□□ 1.57
ATG4D-209ENST00000588857 EYA4O95677 639 aa24.84■■□□□ 1.57
ATG4D-209ENST00000588857 PSAPP07602 524 aa24.84■■□□□ 1.57
ATG4D-209ENST00000588857 ZNF165P49910 485 aa24.84■■□□□ 1.57
ATG4D-209ENST00000588857 MRE11P49959 708 aa24.84■■□□□ 1.57
ATG4D-209ENST00000588857 ACTR2P61160 394 aa24.84■■□□□ 1.57
ATG4D-209ENST00000588857 SP4Q02446 784 aa24.84■■□□□ 1.57
ATG4D-209ENST00000588857 MSL3Q8N5Y2 521 aaKnown RBP24.84■■□□□ 1.57
ATG4D-209ENST00000588857 NPLOC4Q8TAT6 608 aa24.84■■□□□ 1.57
ATG4D-209ENST00000588857 FAM200AQ8TCP9 573 aa24.84■■□□□ 1.57
ATG4D-209ENST00000588857 SCFD2Q8WU76 684 aa24.84■■□□□ 1.57
ATG4D-209ENST00000588857 SOCS4Q8WXH5 440 aa24.84■■□□□ 1.57
ATG4D-209ENST00000588857 TINF2Q9BSI4 451 aa24.84■■□□□ 1.57
ATG4D-209ENST00000588857 DDX41Q9UJV9 622 aaKnown RBP24.84■■□□□ 1.57
ATG4D-209ENST00000588857 MYMKA6NI61 221 aa24.83■■□□□ 1.57
ATG4D-209ENST00000588857 RGS2P41220 211 aa24.83■■□□□ 1.57
ATG4D-209ENST00000588857 FCGRTP55899 365 aa24.83■■□□□ 1.57
ATG4D-209ENST00000588857 PSMC5P62195 406 aa24.83■■□□□ 1.57
ATG4D-209ENST00000588857 CAP1Q01518 475 aa24.83■■□□□ 1.57
ATG4D-209ENST00000588857 TTLL4Q14679 1199 aa24.83■■□□□ 1.57
ATG4D-209ENST00000588857 L1TD1Q5T7N2 865 aaKnown RBP24.83■■□□□ 1.57
ATG4D-209ENST00000588857 MIS18BP1Q6P0N0 1132 aa24.83■■□□□ 1.57
ATG4D-209ENST00000588857 FBXO46Q6PJ61 603 aaPredicted RBP24.83■■□□□ 1.57
ATG4D-209ENST00000588857 C11orf57Q6ZUT1 292 aaPredicted RBP24.83■■□□□ 1.57
ATG4D-209ENST00000588857 GPBP1Q86WP2 473 aa24.83■■□□□ 1.57
ATG4D-209ENST00000588857 MLXIPQ9HAP2 919 aa24.83■■□□□ 1.57
ATG4D-209ENST00000588857 SYNGAP1Q96PV0 1343 aa24.83■■□□□ 1.56
ATG4D-209ENST00000588857 GGPS1O95749 300 aa24.82■■□□□ 1.56
ATG4D-209ENST00000588857 SLC12A3P55017 1021 aa24.82■■□□□ 1.56
ATG4D-209ENST00000588857 LY6KQ17RY6 165 aa24.82■■□□□ 1.56
ATG4D-209ENST00000588857 SYT2Q8N9I0 419 aaPredicted RBP24.82■■□□□ 1.56
ATG4D-209ENST00000588857 MLKLQ8NB16 471 aa24.82■■□□□ 1.56
ATG4D-209ENST00000588857 PIGOQ8TEQ8 1089 aa24.82■■□□□ 1.56
ATG4D-209ENST00000588857 DDX12PQ92771 950 aa24.82■■□□□ 1.56
ATG4D-209ENST00000588857 BHMT2Q9H2M3 363 aa24.82■■□□□ 1.56
ATG4D-209ENST00000588857 DACH1Q9UI36 760 aa24.82■■□□□ 1.56
ATG4D-209ENST00000588857 CCDC85CA6NKD9 419 aa24.81■■□□□ 1.56
ATG4D-209ENST00000588857 FARP2O94887 1054 aaPredicted RBP24.81■■□□□ 1.56
ATG4D-209ENST00000588857 HOXC6P09630 235 aa24.81■■□□□ 1.56
ATG4D-209ENST00000588857 TXNP10599 105 aaKnown RBP24.81■■□□□ 1.56
ATG4D-209ENST00000588857 KCNB1Q14721 858 aa24.81■■□□□ 1.56
ATG4D-209ENST00000588857 ARHGEF6Q15052 776 aa24.81■■□□□ 1.56
ATG4D-209ENST00000588857 CNNM4Q6P4Q7 775 aa24.81■■□□□ 1.56
ATG4D-209ENST00000588857 METTL7BQ6UX53 244 aa24.81■■□□□ 1.56
ATG4D-209ENST00000588857 DYMQ7RTS9 669 aa24.81■■□□□ 1.56
ATG4D-209ENST00000588857 WRAP73Q9P2S5 460 aaPredicted RBP24.81■■□□□ 1.56
ATG4D-209ENST00000588857 DKC1O60832 514 aaKnown RBP eCLIP24.8■■□□□ 1.56
ATG4D-209ENST00000588857 LYPLA2O95372 231 aa24.8■■□□□ 1.56
ATG4D-209ENST00000588857 ARIH2O95376 493 aa24.8■■□□□ 1.56
ATG4D-209ENST00000588857 KRT18P05783 430 aaKnown RBP24.8■■□□□ 1.56
ATG4D-209ENST00000588857 BMP6P22004 513 aa24.8■■□□□ 1.56
ATG4D-209ENST00000588857 LACTBP83111 547 aaPredicted RBP24.8■■□□□ 1.56
ATG4D-209ENST00000588857 KMT5BQ4FZB7 885 aa24.8■■□□□ 1.56
ATG4D-209ENST00000588857 CCDC62Q6P9F0 684 aa24.8■■□□□ 1.56
ATG4D-209ENST00000588857 USP6NLQ92738 828 aa24.8■■□□□ 1.56
ATG4D-209ENST00000588857 ATP6V0A1Q93050 837 aa24.8■■□□□ 1.56
ATG4D-209ENST00000588857 PDGFCQ9NRA1 345 aa24.8■■□□□ 1.56
ATG4D-209ENST00000588857 PVALEFA0A1B0GWK0 134 aa24.8■■□□□ 1.56
ATG4D-209ENST00000588857 KLRC4O43908 158 aa24.8■■□□□ 1.56
ATG4D-209ENST00000588857 SNAI1O95863 264 aaPredicted RBP24.8■■□□□ 1.56
ATG4D-209ENST00000588857 SUPT20HL2P0C7V6 817 aa24.8■■□□□ 1.56
ATG4D-209ENST00000588857 PSMC4P43686 418 aa24.8■■□□□ 1.56
ATG4D-209ENST00000588857 CELF3Q5SZQ8 465 aaKnown RBP24.8■■□□□ 1.56
ATG4D-209ENST00000588857 ABHD15Q6UXT9 468 aa24.8■■□□□ 1.56
ATG4D-209ENST00000588857 DHX37Q8IY37 1157 aaKnown RBP24.8■■□□□ 1.56
ATG4D-209ENST00000588857 C4orf19Q8IY42 314 aa24.8■■□□□ 1.56
ATG4D-209ENST00000588857 ABHD16BQ9H3Z7 469 aa24.8■■□□□ 1.56
ATG4D-209ENST00000588857 CBX8Q9HC52 389 aa24.8■■□□□ 1.56
ATG4D-209ENST00000588857 EXOC1Q9NV70 894 aa24.8■■□□□ 1.56
ATG4D-209ENST00000588857 GABBR1Q9UBS5 961 aa24.8■■□□□ 1.56
ATG4D-209ENST00000588857 BACH1O14867 736 aa24.79■■□□□ 1.56
ATG4D-209ENST00000588857 CYP11B2P19099 503 aa24.79■■□□□ 1.56
ATG4D-209ENST00000588857 CYP2B6P20813 491 aa24.79■■□□□ 1.56
ATG4D-209ENST00000588857 KIF22Q14807 665 aa24.79■■□□□ 1.56
ATG4D-209ENST00000588857 UGCGQ16739 394 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms