RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 MSL3Q8N5Y2 521 aaKnown RBP16.29■□□□□ 0.2
CCDC43-203ENST00000588210 FAM133AQ8N9E0 248 aa16.29■□□□□ 0.2
CCDC43-203ENST00000588210 CCDC12Q8WUD4 166 aaPredicted RBP16.29■□□□□ 0.2
CCDC43-203ENST00000588210 GOLGA1Q92805 767 aa16.29■□□□□ 0.2
CCDC43-203ENST00000588210 ST7Q9NRC1 585 aa16.29■□□□□ 0.2
CCDC43-203ENST00000588210 MAP3K20Q9NYL2 800 aaKnown RBP16.29■□□□□ 0.2
CCDC43-203ENST00000588210 FLRT1Q9NZU1 646 aa16.29■□□□□ 0.2
CCDC43-203ENST00000588210 IGHA2P01877 340 aa16.28■□□□□ 0.2
CCDC43-203ENST00000588210 GYPCP04921 128 aa16.28■□□□□ 0.2
CCDC43-203ENST00000588210 INHAP05111 366 aa16.28■□□□□ 0.2
CCDC43-203ENST00000588210 RPS6P62753 249 aaKnown RBP16.28■□□□□ 0.2
CCDC43-203ENST00000588210 MFSD14CQ5VZR4 134 aa16.28■□□□□ 0.2
CCDC43-203ENST00000588210 ARL6IP4Q66PJ3 421 aaKnown RBP16.28■□□□□ 0.2
CCDC43-203ENST00000588210 PIK3AP1Q6ZUJ8 805 aa16.28■□□□□ 0.2
CCDC43-203ENST00000588210 RMND1Q9NWS8 449 aa16.28■□□□□ 0.2
CCDC43-203ENST00000588210 PLXNA1Q9UIW2 1896 aa16.28■□□□□ 0.2
CCDC43-203ENST00000588210 LRRC10BA6NIK2 292 aa16.28■□□□□ 0.2
CCDC43-203ENST00000588210 CALML3P27482 149 aa16.28■□□□□ 0.2
CCDC43-203ENST00000588210 GHRHRQ02643 423 aa16.28■□□□□ 0.2
CCDC43-203ENST00000588210 KRT31Q15323 416 aa16.28■□□□□ 0.2
CCDC43-203ENST00000588210 IL17AQ16552 155 aa16.28■□□□□ 0.2
CCDC43-203ENST00000588210 TEX35Q5T0J7 233 aa16.28■□□□□ 0.2
CCDC43-203ENST00000588210 CC2D1AQ6P1N0 951 aaPredicted RBP16.28■□□□□ 0.2
CCDC43-203ENST00000588210 hCG_1984214I3L0E3 225 aa16.27■□□□□ 0.2
CCDC43-203ENST00000588210 OPLAHO14841 1288 aa16.27■□□□□ 0.2
CCDC43-203ENST00000588210 KIF5CO60282 957 aa16.27■□□□□ 0.2
CCDC43-203ENST00000588210 CASP14P31944 242 aa16.27■□□□□ 0.2
CCDC43-203ENST00000588210 LONP1P36776 959 aaKnown RBP16.27■□□□□ 0.2
CCDC43-203ENST00000588210 CNTN2Q02246 1040 aa16.27■□□□□ 0.2
CCDC43-203ENST00000588210 PAK1Q13153 545 aa16.27■□□□□ 0.2
CCDC43-203ENST00000588210 TRIM14Q14142 442 aa16.27■□□□□ 0.2
CCDC43-203ENST00000588210 MAP3K21Q5TCX8 1036 aa16.27■□□□□ 0.2
CCDC43-203ENST00000588210 ZNF658Q5TYW1 1059 aaPredicted RBP16.27■□□□□ 0.2
CCDC43-203ENST00000588210 RRAGBQ5VZM2 374 aa16.27■□□□□ 0.2
CCDC43-203ENST00000588210 MAMDC4Q6UXC1 1216 aa16.27■□□□□ 0.2
CCDC43-203ENST00000588210 ZNF713Q8N859 430 aaPredicted RBP16.27■□□□□ 0.2
CCDC43-203ENST00000588210 MTRQ99707 1265 aa16.27■□□□□ 0.2
CCDC43-203ENST00000588210 TINF2Q9BSI4 451 aa16.27■□□□□ 0.2
CCDC43-203ENST00000588210 FXR1P51114 621 aaKnown RBP eCLIP16.26■□□□□ 0.19
CCDC43-203ENST00000588210 TUBB2AQ13885 445 aa16.26■□□□□ 0.19
CCDC43-203ENST00000588210 JAKMIP3Q5VZ66 844 aa16.26■□□□□ 0.19
CCDC43-203ENST00000588210 SLC30A10Q6XR72 485 aa16.26■□□□□ 0.19
CCDC43-203ENST00000588210 TBC1D5Q92609 795 aa16.26■□□□□ 0.19
CCDC43-203ENST00000588210 STAMQ92783 540 aa16.26■□□□□ 0.19
CCDC43-203ENST00000588210 TUBB2BQ9BVA1 445 aa16.26■□□□□ 0.19
CCDC43-203ENST00000588210 UBXN6Q9BZV1 441 aa16.26■□□□□ 0.19
CCDC43-203ENST00000588210 BLZF1Q9H2G9 400 aa16.26■□□□□ 0.19
CCDC43-203ENST00000588210 SH3GLB2Q9NR46 395 aa16.26■□□□□ 0.19
CCDC43-203ENST00000588210 SYNGAP1Q96PV0 1343 aa16.26■□□□□ 0.19
CCDC43-203ENST00000588210 SOWAHBA6NEL2 793 aa16.26■□□□□ 0.19
CCDC43-203ENST00000588210 SEC31AO94979 1220 aaKnown RBP16.26■□□□□ 0.19
CCDC43-203ENST00000588210 CFBP00751 764 aa16.26■□□□□ 0.19
CCDC43-203ENST00000588210 CYP2C19P33261 490 aa16.26■□□□□ 0.19
CCDC43-203ENST00000588210 MCM7P33993 719 aa16.26■□□□□ 0.19
CCDC43-203ENST00000588210 HSD17B4P51659 736 aa16.26■□□□□ 0.19
CCDC43-203ENST00000588210 COPB1P53618 953 aaKnown RBP16.26■□□□□ 0.19
CCDC43-203ENST00000588210 CACNB2Q08289 660 aaPredicted RBP16.26■□□□□ 0.19
CCDC43-203ENST00000588210 TRIM32Q13049 653 aa16.26■□□□□ 0.19
CCDC43-203ENST00000588210 HEATR3Q7Z4Q2 680 aa16.26■□□□□ 0.19
CCDC43-203ENST00000588210 TMTC1Q8IUR5 882 aa16.26■□□□□ 0.19
CCDC43-203ENST00000588210 C4orf32Q8N8J7 132 aa16.26■□□□□ 0.19
CCDC43-203ENST00000588210 DNERQ8NFT8 737 aa16.26■□□□□ 0.19
CCDC43-203ENST00000588210 CPLX3Q8WVH0 158 aa16.26■□□□□ 0.19
CCDC43-203ENST00000588210 FGD4Q96M96 766 aa16.26■□□□□ 0.19
CCDC43-203ENST00000588210 LZTFL1Q9NQ48 299 aa16.26■□□□□ 0.19
CCDC43-203ENST00000588210 RPTORQ8N122 1335 aa16.25■□□□□ 0.19
CCDC43-203ENST00000588210 LOC102724159A0A0B4J2E5 919 aa16.25■□□□□ 0.19
CCDC43-203ENST00000588210 PRKAR2AP13861 404 aaKnown RBP16.25■□□□□ 0.19
CCDC43-203ENST00000588210 TXLNAP40222 546 aa16.25■□□□□ 0.19
CCDC43-203ENST00000588210 PWP2Q15269 919 aaKnown RBP16.25■□□□□ 0.19
CCDC43-203ENST00000588210 TAF3Q5VWG9 929 aa16.25■□□□□ 0.19
CCDC43-203ENST00000588210 SRGAP1Q7Z6B7 1085 aa16.25■□□□□ 0.19
CCDC43-203ENST00000588210 BLIDQ8IZY5 108 aa16.25■□□□□ 0.19
CCDC43-203ENST00000588210 ANKRD20A12PQ8NF67 263 aa16.25■□□□□ 0.19
CCDC43-203ENST00000588210 IRX2Q9BZI1 471 aaPredicted RBP16.25■□□□□ 0.19
CCDC43-203ENST00000588210 ABHD10Q9NUJ1 306 aa16.25■□□□□ 0.19
CCDC43-203ENST00000588210 RBBP6Q7Z6E9 1792 aaKnown RBP16.25■□□□□ 0.19
CCDC43-203ENST00000588210 ASB14A6NK59 587 aa16.25■□□□□ 0.19
CCDC43-203ENST00000588210 N4BP3O15049 544 aa16.25■□□□□ 0.19
CCDC43-203ENST00000588210 RPN1P04843 607 aaKnown RBP16.25■□□□□ 0.19
CCDC43-203ENST00000588210 CCT6AP40227 531 aaKnown RBP16.25■□□□□ 0.19
CCDC43-203ENST00000588210 MTFR1Q15390 333 aa16.25■□□□□ 0.19
CCDC43-203ENST00000588210 TCP11X2Q5H9J9 407 aa16.25■□□□□ 0.19
CCDC43-203ENST00000588210 WWC2Q6AWC2 1192 aa16.25■□□□□ 0.19
CCDC43-203ENST00000588210 SYTL5Q8TDW5 730 aaPredicted RBP16.25■□□□□ 0.19
CCDC43-203ENST00000588210 NELFBQ8WX92 580 aa16.25■□□□□ 0.19
CCDC43-203ENST00000588210 EPC1Q9H2F5 836 aa16.25■□□□□ 0.19
CCDC43-203ENST00000588210 HMX1Q9NP08 348 aaPredicted RBP16.25■□□□□ 0.19
CCDC43-203ENST00000588210 BARHL2Q9NY43 387 aa16.25■□□□□ 0.19
CCDC43-203ENST00000588210 CDC23Q9UJX2 597 aa16.25■□□□□ 0.19
CCDC43-203ENST00000588210 KCNJ18B7U540 433 aa16.24■□□□□ 0.19
CCDC43-203ENST00000588210 GCOM1H8Y6P7 765 aaPredicted RBP16.24■□□□□ 0.19
CCDC43-203ENST00000588210 ADAMTS3O15072 1205 aa16.24■□□□□ 0.19
CCDC43-203ENST00000588210 POLR2MP0CAP2 368 aa16.24■□□□□ 0.19
CCDC43-203ENST00000588210 CCL5P13501 91 aa16.24■□□□□ 0.19
CCDC43-203ENST00000588210 KCNJ12Q14500 433 aa16.24■□□□□ 0.19
CCDC43-203ENST00000588210 PPP1R18Q6NYC8 613 aa16.24■□□□□ 0.19
CCDC43-203ENST00000588210 CEP112Q8N8E3 955 aa16.24■□□□□ 0.19
CCDC43-203ENST00000588210 GPKOWQ92917 476 aaPredicted RBP eCLIP16.24■□□□□ 0.19
CCDC43-203ENST00000588210 PURBQ96QR8 312 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms