RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 PCYT2Q99447 389 aa21.46■■□□□ 1.03
TRIM47-205ENST00000587774 IFIH1Q9BYX4 1025 aaKnown RBP21.46■■□□□ 1.03
TRIM47-205ENST00000587774 SMARCAD1Q9H4L7 1026 aa21.46■■□□□ 1.03
TRIM47-205ENST00000587774 SUGCTQ9HAC7 445 aa21.46■■□□□ 1.03
TRIM47-205ENST00000587774 SLC9A2Q9UBY0 812 aa21.46■■□□□ 1.03
TRIM47-205ENST00000587774 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.45■■□□□ 1.02
TRIM47-205ENST00000587774 SMCO2A6NFE2 343 aa21.45■■□□□ 1.02
TRIM47-205ENST00000587774 TNFRSF10AO00220 468 aa21.45■■□□□ 1.02
TRIM47-205ENST00000587774 FOSP01100 380 aaPredicted RBP21.45■■□□□ 1.02
TRIM47-205ENST00000587774 CHRNA1P02708 482 aa21.45■■□□□ 1.02
TRIM47-205ENST00000587774 HSPA4P34932 840 aa21.45■■□□□ 1.02
TRIM47-205ENST00000587774 METAP2P50579 478 aaKnown RBP eCLIP21.45■■□□□ 1.02
TRIM47-205ENST00000587774 AP3B2Q13367 1082 aa21.45■■□□□ 1.02
TRIM47-205ENST00000587774 MARCH8Q5T0T0 291 aa21.45■■□□□ 1.02
TRIM47-205ENST00000587774 TAF2Q6P1X5 1199 aa21.45■■□□□ 1.02
TRIM47-205ENST00000587774 Q6ZUG5 572 aa21.45■■□□□ 1.02
TRIM47-205ENST00000587774 RPAINQ86UA6 219 aa21.45■■□□□ 1.02
TRIM47-205ENST00000587774 IL27Q8NEV9 243 aa21.45■■□□□ 1.02
TRIM47-205ENST00000587774 SP7Q8TDD2 431 aaPredicted RBP21.45■■□□□ 1.02
TRIM47-205ENST00000587774 APBB2Q92870 758 aa21.45■■□□□ 1.02
TRIM47-205ENST00000587774 CCDC136Q96JN2 1154 aa21.45■■□□□ 1.02
TRIM47-205ENST00000587774 SNX14Q9Y5W7 946 aa21.45■■□□□ 1.02
TRIM47-205ENST00000587774 NFASCO94856 1347 aa21.45■■□□□ 1.02
TRIM47-205ENST00000587774 MBLAC1A4D2B0 266 aaPredicted RBP21.44■■□□□ 1.02
TRIM47-205ENST00000587774 ARP10275 920 aa21.44■■□□□ 1.02
TRIM47-205ENST00000587774 ADD1P35611 737 aaKnown RBP21.44■■□□□ 1.02
TRIM47-205ENST00000587774 SREBF1P36956 1147 aa21.44■■□□□ 1.02
TRIM47-205ENST00000587774 KCNQ1P51787 676 aa21.44■■□□□ 1.02
TRIM47-205ENST00000587774 MGAT3Q09327 533 aa21.44■■□□□ 1.02
TRIM47-205ENST00000587774 ITGB3BPQ13352 177 aaPredicted RBP21.44■■□□□ 1.02
TRIM47-205ENST00000587774 PFKFB3Q16875 520 aaPredicted RBP21.44■■□□□ 1.02
TRIM47-205ENST00000587774 CEP55Q53EZ4 464 aa21.44■■□□□ 1.02
TRIM47-205ENST00000587774 BRF1Q92994 677 aa21.44■■□□□ 1.02
TRIM47-205ENST00000587774 SDF4Q9BRK5 362 aa21.44■■□□□ 1.02
TRIM47-205ENST00000587774 C17orf80Q9BSJ5 609 aa21.44■■□□□ 1.02
TRIM47-205ENST00000587774 UPP2O95045 317 aa21.43■■□□□ 1.02
TRIM47-205ENST00000587774 GHRP10912 638 aa21.43■■□□□ 1.02
TRIM47-205ENST00000587774 ACTR2P61160 394 aa21.43■■□□□ 1.02
TRIM47-205ENST00000587774 IGBP1P78318 339 aa21.43■■□□□ 1.02
TRIM47-205ENST00000587774 DNAJB3Q8WWF6 145 aa21.43■■□□□ 1.02
TRIM47-205ENST00000587774 TOP1MTQ969P6 601 aa21.43■■□□□ 1.02
TRIM47-205ENST00000587774 ZBTB10Q96DT7 871 aa21.43■■□□□ 1.02
TRIM47-205ENST00000587774 UHRF1Q96T88 793 aaPredicted RBP21.43■■□□□ 1.02
TRIM47-205ENST00000587774 GLT8D2Q9H1C3 349 aa21.43■■□□□ 1.02
TRIM47-205ENST00000587774 AGO4Q9HCK5 861 aaKnown RBP21.43■■□□□ 1.02
TRIM47-205ENST00000587774 SCG2P13521 617 aa21.42■■□□□ 1.02
TRIM47-205ENST00000587774 LPIN1Q14693 890 aa21.42■■□□□ 1.02
TRIM47-205ENST00000587774 AAK1Q2M2I8 961 aa21.42■■□□□ 1.02
TRIM47-205ENST00000587774 BLOC1S2Q6QNY1 142 aa21.42■■□□□ 1.02
TRIM47-205ENST00000587774 YME1L1Q96TA2 773 aa21.42■■□□□ 1.02
TRIM47-205ENST00000587774 AZI2Q9H6S1 392 aa21.42■■□□□ 1.02
TRIM47-205ENST00000587774 LMCD1Q9NZU5 365 aa21.42■■□□□ 1.02
TRIM47-205ENST00000587774 CCDC196A0A1B0GTZ2 297 aa21.41■■□□□ 1.02
TRIM47-205ENST00000587774 MEIS1O00470 390 aa21.41■■□□□ 1.02
TRIM47-205ENST00000587774 ADAMTS3O15072 1205 aa21.41■■□□□ 1.02
TRIM47-205ENST00000587774 BMP1P13497 986 aa21.41■■□□□ 1.02
TRIM47-205ENST00000587774 INSRRP14616 1297 aa21.41■■□□□ 1.02
TRIM47-205ENST00000587774 JAKMIP3Q5VZ66 844 aa21.41■■□□□ 1.02
TRIM47-205ENST00000587774 RSPH3Q86UC2 560 aa21.41■■□□□ 1.02
TRIM47-205ENST00000587774 FBXO22Q8NEZ5 403 aa21.41■■□□□ 1.02
TRIM47-205ENST00000587774 NECAB3Q96P71 396 aaPredicted RBP21.41■■□□□ 1.02
TRIM47-205ENST00000587774 COG5Q9UP83 839 aa21.41■■□□□ 1.02
TRIM47-205ENST00000587774 TRPC6Q9Y210 931 aa21.41■■□□□ 1.02
TRIM47-205ENST00000587774 CDY2AQ9Y6F7 541 aa21.41■■□□□ 1.02
TRIM47-205ENST00000587774 ESYT2A0FGR8 921 aa21.4■■□□□ 1.02
TRIM47-205ENST00000587774 FAM86B1E9PN63 330 aa21.4■■□□□ 1.02
TRIM47-205ENST00000587774 FAM86B2P0C5J1 330 aa21.4■■□□□ 1.02
TRIM47-205ENST00000587774 RPS6KB1P23443 525 aa21.4■■□□□ 1.02
TRIM47-205ENST00000587774 ZNF76P36508 570 aa21.4■■□□□ 1.02
TRIM47-205ENST00000587774 PLCB4Q15147 1175 aa21.4■■□□□ 1.02
TRIM47-205ENST00000587774 FBXO47Q5MNV8 452 aa21.4■■□□□ 1.02
TRIM47-205ENST00000587774 TRAPPC12Q8WVT3 735 aa21.4■■□□□ 1.02
TRIM47-205ENST00000587774 CRYGNQ8WXF5 182 aa21.4■■□□□ 1.02
TRIM47-205ENST00000587774 AGXT2Q9BYV1 514 aa21.4■■□□□ 1.02
TRIM47-205ENST00000587774 FAM49AQ9H0Q0 323 aaPredicted RBP21.4■■□□□ 1.02
TRIM47-205ENST00000587774 RRN3P2A6NIE6 340 aa21.39■■□□□ 1.01
TRIM47-205ENST00000587774 DDX39AO00148 427 aaKnown RBP21.39■■□□□ 1.01
TRIM47-205ENST00000587774 CCNE2O96020 404 aa21.39■■□□□ 1.01
TRIM47-205ENST00000587774 MRPS6P82932 125 aaKnown RBP21.39■■□□□ 1.01
TRIM47-205ENST00000587774 PKN1Q16512 942 aa21.39■■□□□ 1.01
TRIM47-205ENST00000587774 NIPA1Q7RTP0 329 aa21.39■■□□□ 1.01
TRIM47-205ENST00000587774 PLPPR4Q7Z2D5 763 aa21.39■■□□□ 1.01
TRIM47-205ENST00000587774 FBXL16Q8N461 479 aa21.39■■□□□ 1.01
TRIM47-205ENST00000587774 PHKBQ93100 1093 aa21.39■■□□□ 1.01
TRIM47-205ENST00000587774 HLA-CQ95604 372 aa21.39■■□□□ 1.01
TRIM47-205ENST00000587774 ZMYND12Q9H0C1 365 aa21.39■■□□□ 1.01
TRIM47-205ENST00000587774 ARID2Q68CP9 1835 aa21.39■■□□□ 1.01
TRIM47-205ENST00000587774 IGLV3-22A0A075B6J6 115 aa21.38■■□□□ 1.01
TRIM47-205ENST00000587774 REC8O95072 547 aa21.38■■□□□ 1.01
TRIM47-205ENST00000587774 ATG7O95352 703 aa21.38■■□□□ 1.01
TRIM47-205ENST00000587774 STAT5BP51692 787 aa21.38■■□□□ 1.01
TRIM47-205ENST00000587774 EPC2Q52LR7 807 aa21.38■■□□□ 1.01
TRIM47-205ENST00000587774 TSHZ1Q6ZSZ6 1077 aa21.38■■□□□ 1.01
TRIM47-205ENST00000587774 REXO1Q8N1G1 1221 aaKnown RBP21.38■■□□□ 1.01
TRIM47-205ENST00000587774 SAMD11Q96NU1 681 aa21.38■■□□□ 1.01
TRIM47-205ENST00000587774 IGKV6D-21A0A0A0MT36 114 aa21.37■■□□□ 1.01
TRIM47-205ENST00000587774 PRPF3O43395 683 aaKnown RBP21.37■■□□□ 1.01
TRIM47-205ENST00000587774 RPLP2P05387 115 aaKnown RBP21.37■■□□□ 1.01
TRIM47-205ENST00000587774 TMEM62Q0P6H9 643 aa21.37■■□□□ 1.01
TRIM47-205ENST00000587774 PLA2G4DQ86XP0 818 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms