RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 LMBR1Q8WVP7 490 aa21.27■■□□□ 1
ATG4D-203ENST00000585752 ARNTL2Q8WYA1 636 aa21.27■■□□□ 1
ATG4D-203ENST00000585752 SYMPKQ92797 1274 aaKnown RBP21.27■■□□□ 1
ATG4D-203ENST00000585752 NFASCO94856 1347 aa21.27■□□□□ 0.99
ATG4D-203ENST00000585752 MYH9P35579 1960 aaKnown RBP21.27■□□□□ 0.99
ATG4D-203ENST00000585752 RRN3P2A6NIE6 340 aa21.26■□□□□ 0.99
ATG4D-203ENST00000585752 DEXIO95424 95 aa21.26■□□□□ 0.99
ATG4D-203ENST00000585752 RPLP2P05387 115 aaKnown RBP21.26■□□□□ 0.99
ATG4D-203ENST00000585752 HOXC8P31273 242 aa21.26■□□□□ 0.99
ATG4D-203ENST00000585752 SREBF1P36956 1147 aa21.26■□□□□ 0.99
ATG4D-203ENST00000585752 IGBP1P78318 339 aa21.26■□□□□ 0.99
ATG4D-203ENST00000585752 DEFB103AP81534 67 aa21.26■□□□□ 0.99
ATG4D-203ENST00000585752 GRIK4Q16099 956 aa21.26■□□□□ 0.99
ATG4D-203ENST00000585752 NTRK3Q16288 839 aa21.26■□□□□ 0.99
ATG4D-203ENST00000585752 ME3Q16798 604 aa21.26■□□□□ 0.99
ATG4D-203ENST00000585752 FAM117BQ6P1L5 589 aa21.26■□□□□ 0.99
ATG4D-203ENST00000585752 PLA2G4DQ86XP0 818 aa21.26■□□□□ 0.99
ATG4D-203ENST00000585752 MYOCDQ8IZQ8 938 aa21.26■□□□□ 0.99
ATG4D-203ENST00000585752 REXO1Q8N1G1 1221 aaKnown RBP21.26■□□□□ 0.99
ATG4D-203ENST00000585752 RAD9AQ99638 391 aa21.26■□□□□ 0.99
ATG4D-203ENST00000585752 TUBE1Q9UJT0 475 aa21.26■□□□□ 0.99
ATG4D-203ENST00000585752 TRPC6Q9Y210 931 aa21.26■□□□□ 0.99
ATG4D-203ENST00000585752 TELO2Q9Y4R8 837 aa21.26■□□□□ 0.99
ATG4D-203ENST00000585752 M0QZ92 97 aa21.25■□□□□ 0.99
ATG4D-203ENST00000585752 ARP10275 920 aa21.25■□□□□ 0.99
ATG4D-203ENST00000585752 CLK2P49760 499 aaKnown RBP21.25■□□□□ 0.99
ATG4D-203ENST00000585752 TRAF7Q6Q0C0 670 aa21.25■□□□□ 0.99
ATG4D-203ENST00000585752 NECAB1Q8N987 351 aa21.25■□□□□ 0.99
ATG4D-203ENST00000585752 CYP2W1Q8TAV3 490 aa21.25■□□□□ 0.99
ATG4D-203ENST00000585752 APBB2Q92870 758 aa21.25■□□□□ 0.99
ATG4D-203ENST00000585752 GTF3C6Q969F1 213 aa21.25■□□□□ 0.99
ATG4D-203ENST00000585752 ZMYND12Q9H0C1 365 aa21.25■□□□□ 0.99
ATG4D-203ENST00000585752 AGO4Q9HCK5 861 aaKnown RBP21.25■□□□□ 0.99
ATG4D-203ENST00000585752 SH2B1Q9NRF2 756 aaPredicted RBP21.25■□□□□ 0.99
ATG4D-203ENST00000585752 ESYT2A0FGR8 921 aa21.24■□□□□ 0.99
ATG4D-203ENST00000585752 DDX39AO00148 427 aaKnown RBP21.24■□□□□ 0.99
ATG4D-203ENST00000585752 BACH1O14867 736 aa21.24■□□□□ 0.99
ATG4D-203ENST00000585752 GJB5O95377 273 aa21.24■□□□□ 0.99
ATG4D-203ENST00000585752 XBP1P17861 261 aa21.24■□□□□ 0.99
ATG4D-203ENST00000585752 MCM2P49736 904 aa21.24■□□□□ 0.99
ATG4D-203ENST00000585752 STAT5BP51692 787 aa21.24■□□□□ 0.99
ATG4D-203ENST00000585752 ACTR2P61160 394 aa21.24■□□□□ 0.99
ATG4D-203ENST00000585752 ADGRE1Q14246 886 aa21.24■□□□□ 0.99
ATG4D-203ENST00000585752 SKIV2LQ15477 1246 aaKnown RBP21.24■□□□□ 0.99
ATG4D-203ENST00000585752 PLEKHG4Q58EX7 1191 aa21.24■□□□□ 0.99
ATG4D-203ENST00000585752 FAM160B1Q5W0V3 765 aa21.24■□□□□ 0.99
ATG4D-203ENST00000585752 NIPA1Q7RTP0 329 aa21.24■□□□□ 0.99
ATG4D-203ENST00000585752 WASF1Q92558 559 aa21.24■□□□□ 0.99
ATG4D-203ENST00000585752 INSL6Q9Y581 213 aa21.24■□□□□ 0.99
ATG4D-203ENST00000585752 MEIS1O00470 390 aa21.23■□□□□ 0.99
ATG4D-203ENST00000585752 LARGE1O95461 756 aa21.23■□□□□ 0.99
ATG4D-203ENST00000585752 NLRP5P59047 1200 aa21.23■□□□□ 0.99
ATG4D-203ENST00000585752 SETQ01105 290 aaPredicted RBP21.23■□□□□ 0.99
ATG4D-203ENST00000585752 TAP1Q03518 808 aa21.23■□□□□ 0.99
ATG4D-203ENST00000585752 MBTPS1Q14703 1052 aa21.23■□□□□ 0.99
ATG4D-203ENST00000585752 TMCO2Q7Z6W1 182 aaPredicted RBP21.23■□□□□ 0.99
ATG4D-203ENST00000585752 THEGQ9P2T0 379 aa21.23■□□□□ 0.99
ATG4D-203ENST00000585752 LOXHD1Q8IVV2 1947 aa21.22■□□□□ 0.99
ATG4D-203ENST00000585752 ADAM17P78536 824 aa21.22■□□□□ 0.99
ATG4D-203ENST00000585752 IER5Q5VY09 327 aa21.22■□□□□ 0.99
ATG4D-203ENST00000585752 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.22■□□□□ 0.99
ATG4D-203ENST00000585752 PLPPR4Q7Z2D5 763 aa21.22■□□□□ 0.99
ATG4D-203ENST00000585752 USP38Q8NB14 1042 aa21.22■□□□□ 0.99
ATG4D-203ENST00000585752 ZNF577Q9BSK1 485 aa21.22■□□□□ 0.99
ATG4D-203ENST00000585752 COL25A1Q9BXS0 654 aaPredicted RBP21.22■□□□□ 0.99
ATG4D-203ENST00000585752 IFIH1Q9BYX4 1025 aaKnown RBP21.22■□□□□ 0.99
ATG4D-203ENST00000585752 ORC3Q9UBD5 711 aaPredicted RBP21.22■□□□□ 0.99
ATG4D-203ENST00000585752 STK36Q9NRP7 1315 aa21.22■□□□□ 0.99
ATG4D-203ENST00000585752 RFXAPO00287 272 aa21.21■□□□□ 0.99
ATG4D-203ENST00000585752 UPP2O95045 317 aa21.21■□□□□ 0.99
ATG4D-203ENST00000585752 CYP3A4P08684 503 aa21.21■□□□□ 0.99
ATG4D-203ENST00000585752 INSRRP14616 1297 aa21.21■□□□□ 0.99
ATG4D-203ENST00000585752 SLC26A2P50443 739 aa21.21■□□□□ 0.99
ATG4D-203ENST00000585752 PKN1Q16512 942 aa21.21■□□□□ 0.99
ATG4D-203ENST00000585752 MIS18BP1Q6P0N0 1132 aa21.21■□□□□ 0.99
ATG4D-203ENST00000585752 CCDC83Q8IWF9 413 aa21.21■□□□□ 0.99
ATG4D-203ENST00000585752 CKAP2LQ8IYA6 745 aa21.21■□□□□ 0.99
ATG4D-203ENST00000585752 DNAJB3Q8WWF6 145 aa21.21■□□□□ 0.99
ATG4D-203ENST00000585752 FAM49AQ9H0Q0 323 aaPredicted RBP21.21■□□□□ 0.99
ATG4D-203ENST00000585752 SH3GLB2Q9NR46 395 aa21.21■□□□□ 0.99
ATG4D-203ENST00000585752 TBC1D22BQ9NU19 505 aa21.21■□□□□ 0.99
ATG4D-203ENST00000585752 SIP14410 1827 aa21.2■□□□□ 0.98
ATG4D-203ENST00000585752 POTEB3A0JP26 581 aa21.2■□□□□ 0.98
ATG4D-203ENST00000585752 TCTN1Q2MV58 587 aa21.2■□□□□ 0.98
ATG4D-203ENST00000585752 TJAP1Q5JTD0 557 aa21.2■□□□□ 0.98
ATG4D-203ENST00000585752 FAM26DQ5JW98 314 aa21.2■□□□□ 0.98
ATG4D-203ENST00000585752 POTEBQ6S5H4 581 aa21.2■□□□□ 0.98
ATG4D-203ENST00000585752 RUFY4Q6ZNE9 571 aa21.2■□□□□ 0.98
ATG4D-203ENST00000585752 RPAINQ86UA6 219 aa21.2■□□□□ 0.98
ATG4D-203ENST00000585752 TGS1Q96RS0 853 aaKnown RBP21.2■□□□□ 0.98
ATG4D-203ENST00000585752 YME1L1Q96TA2 773 aa21.2■□□□□ 0.98
ATG4D-203ENST00000585752 VPS54Q9P1Q0 977 aa21.2■□□□□ 0.98
ATG4D-203ENST00000585752 MTUS1Q9ULD2 1270 aa21.2■□□□□ 0.98
ATG4D-203ENST00000585752 SAMM50Q9Y512 469 aa21.2■□□□□ 0.98
ATG4D-203ENST00000585752 LCHNA4D1U4 455 aa21.19■□□□□ 0.98
ATG4D-203ENST00000585752 IPO5O00410 1097 aaKnown RBP21.19■□□□□ 0.98
ATG4D-203ENST00000585752 GHRP10912 638 aa21.19■□□□□ 0.98
ATG4D-203ENST00000585752 ITGB3BPQ13352 177 aaPredicted RBP21.19■□□□□ 0.98
ATG4D-203ENST00000585752 PRR16Q569H4 304 aa21.19■□□□□ 0.98
ATG4D-203ENST00000585752 ATXN2LQ8WWM7 1075 aaKnown RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms