RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-206	ENST00000585460	RTN4RL1	Q86UN2	441 aa	Predicted RBP	18.73	■□□□□ 0.59
PRKAR1A-206	ENST00000585460	FAM178B	Q8IXR5	827 aa		18.73	■□□□□ 0.59
PRKAR1A-206	ENST00000585460	NEK9	Q8TD19	979 aa		18.73	■□□□□ 0.59
PRKAR1A-206	ENST00000585460	NEK1	Q96PY6	1258 aa		18.73	■□□□□ 0.59
PRKAR1A-206	ENST00000585460	AGO3	Q9H9G7	860 aa	Known RBP	18.73	■□□□□ 0.59
PRKAR1A-206	ENST00000585460	JPH1	Q9HDC5	661 aa	Predicted RBP	18.73	■□□□□ 0.59
PRKAR1A-206	ENST00000585460	RIC8A	Q9NPQ8	531 aa		18.73	■□□□□ 0.59
PRKAR1A-206	ENST00000585460	CDY2A	Q9Y6F7	541 aa		18.73	■□□□□ 0.59
PRKAR1A-206	ENST00000585460	GRXCR2	A6NFK2	248 aa		18.72	■□□□□ 0.59
PRKAR1A-206	ENST00000585460	SKAP1	Q86WV1	359 aa		18.72	■□□□□ 0.59
PRKAR1A-206	ENST00000585460	TCEANC2	Q96MN5	208 aa		18.72	■□□□□ 0.59
PRKAR1A-206	ENST00000585460	SLC9A2	Q9UBY0	812 aa		18.72	■□□□□ 0.59
PRKAR1A-206	ENST00000585460	BRWD1	Q9NSI6	2320 aa		18.72	■□□□□ 0.59
PRKAR1A-206	ENST00000585460	C5orf67	F2Z3F1	127 aa		18.71	■□□□□ 0.59
PRKAR1A-206	ENST00000585460	PI4K2B	G5E9Z4	385 aa		18.71	■□□□□ 0.59
PRKAR1A-206	ENST00000585460		H3BQ06	376 aa	Predicted RBP	18.71	■□□□□ 0.59
PRKAR1A-206	ENST00000585460	RB1	P06400	928 aa		18.71	■□□□□ 0.59
PRKAR1A-206	ENST00000585460	IL9	P15248	144 aa		18.71	■□□□□ 0.59
PRKAR1A-206	ENST00000585460	ACTR2	P61160	394 aa		18.71	■□□□□ 0.59
PRKAR1A-206	ENST00000585460	MRPS6	P82932	125 aa	Known RBP	18.71	■□□□□ 0.59
PRKAR1A-206	ENST00000585460	COL19A1	Q14993	1142 aa		18.71	■□□□□ 0.59
PRKAR1A-206	ENST00000585460	PLCB4	Q15147	1175 aa		18.71	■□□□□ 0.59
PRKAR1A-206	ENST00000585460	TSGA10IP	Q3SY00	556 aa		18.71	■□□□□ 0.59
PRKAR1A-206	ENST00000585460	TIGD5	Q53EQ6	642 aa		18.71	■□□□□ 0.59
PRKAR1A-206	ENST00000585460	PTCRA	Q6ISU1	281 aa	Predicted RBP	18.71	■□□□□ 0.59
PRKAR1A-206	ENST00000585460	DHX32	Q7L7V1	743 aa	Known RBP	18.71	■□□□□ 0.59
PRKAR1A-206	ENST00000585460	RASEF	Q8IZ41	740 aa		18.71	■□□□□ 0.59
PRKAR1A-206	ENST00000585460	GJD3	Q8N144	294 aa		18.71	■□□□□ 0.59
PRKAR1A-206	ENST00000585460	ZNF689	Q96CS4	500 aa	Predicted RBP	18.71	■□□□□ 0.59
PRKAR1A-206	ENST00000585460	PGBD1	Q96JS3	809 aa		18.71	■□□□□ 0.59
PRKAR1A-206	ENST00000585460	FAM49A	Q9H0Q0	323 aa	Predicted RBP	18.71	■□□□□ 0.59
PRKAR1A-206	ENST00000585460	RC3H2	Q9HBD1	1191 aa	Known RBP	18.71	■□□□□ 0.59
PRKAR1A-206	ENST00000585460	C11orf16	Q9NQ32	467 aa		18.71	■□□□□ 0.59
PRKAR1A-206	ENST00000585460	FAM217B	Q9NTX9	383 aa	Predicted RBP	18.71	■□□□□ 0.59
PRKAR1A-206	ENST00000585460	RBM28	Q9NW13	759 aa	Known RBP	18.71	■□□□□ 0.59
PRKAR1A-206	ENST00000585460	MEIS1	O00470	390 aa		18.7	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	GRM6	O15303	877 aa		18.7	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	GPR37L1	O60883	481 aa		18.7	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	ATG7	O95352	703 aa		18.7	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	FOS	P01100	380 aa	Predicted RBP	18.7	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	CD52	P31358	61 aa		18.7	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	STAT5B	P51692	787 aa		18.7	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	NAPA	P54920	295 aa		18.7	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	ITGB3BP	Q13352	177 aa	Predicted RBP	18.7	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	ADCK5	Q3MIX3	580 aa		18.7	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	CEP55	Q53EZ4	464 aa		18.7	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	TMEM31	Q5JXX7	168 aa		18.7	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	RNF20	Q5VTR2	975 aa		18.7	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	IER5	Q5VY09	327 aa		18.7	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	TSHZ1	Q6ZSZ6	1077 aa		18.7	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	PLPPR4	Q7Z2D5	763 aa		18.7	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	CRIPAK	Q8N1N5	446 aa		18.7	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	TRAPPC12	Q8WVT3	735 aa		18.7	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	LINC01599	Q8WXQ3	324 aa		18.7	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	CLP1	Q92989	425 aa	Known RBP	18.7	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	PABPC5	Q96DU9	382 aa	Known RBP	18.7	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	NSUN3	Q9H649	340 aa	Known RBP	18.7	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	AZI2	Q9H6S1	392 aa		18.7	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	AGO4	Q9HCK5	861 aa	Known RBP	18.7	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	TMEM260	Q9NX78	707 aa		18.7	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	PCDHA2	Q9Y5H9	948 aa		18.7	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	NFASC	O94856	1347 aa		18.7	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	CNTNAP5	Q8WYK1	1306 aa		18.7	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	SMCO2	A6NFE2	343 aa		18.69	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	STXBP3	O00186	592 aa		18.69	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	ZBTB43	O43298	467 aa		18.69	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	DGKI	O75912	1065 aa		18.69	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	CTNNB1	P35222	781 aa		18.69	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	RTN1	Q16799	776 aa		18.69	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	PUS10	Q3MIT2	529 aa	Known RBP	18.69	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	BMP2KL	Q5H9B9	411 aa		18.69	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	TEX2	Q8IWB9	1127 aa		18.69	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	SDF4	Q9BRK5	362 aa		18.69	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	SQOR	Q9Y6N5	450 aa		18.69	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	POTEB3	A0JP26	581 aa		18.68	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	RPLP2	P05387	115 aa	Known RBP	18.68	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	LTBR	P36941	435 aa		18.68	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	ADCY7	P51828	1080 aa		18.68	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	TMEM62	Q0P6H9	643 aa		18.68	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	BTG3	Q14201	252 aa	Predicted RBP	18.68	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	POTEB	Q6S5H4	581 aa		18.68	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	EP400NL	Q6ZTU2	488 aa		18.68	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	TNPO1	Q92973	898 aa	Known RBP	18.68	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	ANO3	Q9BYT9	981 aa		18.68	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	BARHL2	Q9NY43	387 aa		18.68	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	PADI3	Q9ULW8	664 aa		18.68	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	TRPC6	Q9Y210	931 aa		18.68	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	COL4A4	P53420	1690 aa	Predicted RBP	18.68	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	IGKV6D-21	A0A0A0MT36	114 aa		18.67	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	CCNE2	O96020	404 aa		18.67	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	CDC27	P30260	824 aa		18.67	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	PLA2G5	P39877	138 aa		18.67	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	CLK2	P49760	499 aa	Known RBP	18.67	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	PPP1R18	Q6NYC8	613 aa		18.67	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	NME8	Q8N427	588 aa		18.67	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	C11orf84	Q9BUA3	381 aa	Predicted RBP	18.67	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	CELF4	Q9BZC1	486 aa	Known RBP	18.67	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	LMAN2L	Q9H0V9	348 aa		18.67	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	RWDD3	Q9Y3V2	267 aa		18.67	■□□□□ 0.58
PRKAR1A-206	ENST00000585460	TRPV2	Q9Y5S1	764 aa		18.67	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms