RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 NLRC5Q86WI3 1866 aa15.37■□□□□ 0.05
COPS3-218ENST00000584216 MBLAC1A4D2B0 266 aaPredicted RBP15.37■□□□□ 0.05
COPS3-218ENST00000584216 RRN3P2A6NIE6 340 aa15.37■□□□□ 0.05
COPS3-218ENST00000584216 LOC730098B7Z3J9 87 aa15.37■□□□□ 0.05
COPS3-218ENST00000584216 RBAK-RBAKDNI3L0D1 243 aa15.37■□□□□ 0.05
COPS3-218ENST00000584216 PIK3CDO00329 1044 aa15.37■□□□□ 0.05
COPS3-218ENST00000584216 IFIT3O14879 490 aaKnown RBP15.37■□□□□ 0.05
COPS3-218ENST00000584216 MRPS6P82932 125 aaKnown RBP15.37■□□□□ 0.05
COPS3-218ENST00000584216 ZXDAP98168 799 aa15.37■□□□□ 0.05
COPS3-218ENST00000584216 CATIPQ7Z7H3 387 aa15.37■□□□□ 0.05
COPS3-218ENST00000584216 RALYLQ86SE5 291 aaKnown RBP15.37■□□□□ 0.05
COPS3-218ENST00000584216 CHD1LQ86WJ1 897 aa15.37■□□□□ 0.05
COPS3-218ENST00000584216 PRSS33Q8NF86 280 aa15.37■□□□□ 0.05
COPS3-218ENST00000584216 DNAJB3Q8WWF6 145 aa15.37■□□□□ 0.05
COPS3-218ENST00000584216 RWDD1Q9H446 243 aaPredicted RBP15.37■□□□□ 0.05
COPS3-218ENST00000584216 SMARCAD1Q9H4L7 1026 aa15.37■□□□□ 0.05
COPS3-218ENST00000584216 MRPL42Q9Y6G3 142 aaKnown RBP15.37■□□□□ 0.05
COPS3-218ENST00000584216 U3KPZ7 1027 aaPredicted RBP15.37■□□□□ 0.05
COPS3-218ENST00000584216 CYTH3O43739 400 aa15.36■□□□□ 0.05
COPS3-218ENST00000584216 ITGB1P05556 798 aa15.36■□□□□ 0.05
COPS3-218ENST00000584216 SRGAP2BP0DMP2 458 aa15.36■□□□□ 0.05
COPS3-218ENST00000584216 MARK3P27448 753 aa15.36■□□□□ 0.05
COPS3-218ENST00000584216 CAMK1Q14012 370 aa15.36■□□□□ 0.05
COPS3-218ENST00000584216 CBX2Q14781 532 aaPredicted RBP15.36■□□□□ 0.05
COPS3-218ENST00000584216 WTAPQ15007 396 aa15.36■□□□□ 0.05
COPS3-218ENST00000584216 CYB5R4Q7L1T6 521 aa15.36■□□□□ 0.05
COPS3-218ENST00000584216 PLEKHM2Q8IWE5 1019 aa15.36■□□□□ 0.05
COPS3-218ENST00000584216 SMC5Q8IY18 1101 aa15.36■□□□□ 0.05
COPS3-218ENST00000584216 FBXL6Q8N531 539 aa15.36■□□□□ 0.05
COPS3-218ENST00000584216 SPPL3Q8TCT6 385 aa15.36■□□□□ 0.05
COPS3-218ENST00000584216 POF1BQ8WVV4 589 aa15.36■□□□□ 0.05
COPS3-218ENST00000584216 RRP36Q96EU6 259 aaKnown RBP15.36■□□□□ 0.05
COPS3-218ENST00000584216 PHF7Q9BWX1 381 aaPredicted RBP15.36■□□□□ 0.05
COPS3-218ENST00000584216 AAASQ9NRG9 546 aa15.36■□□□□ 0.05
COPS3-218ENST00000584216 SEC63Q9UGP8 760 aaKnown RBP15.36■□□□□ 0.05
COPS3-218ENST00000584216 LRFN2Q9ULH4 789 aa15.36■□□□□ 0.05
COPS3-218ENST00000584216 CD52P31358 61 aa15.35■□□□□ 0.05
COPS3-218ENST00000584216 KIF5BP33176 963 aa15.35■□□□□ 0.05
COPS3-218ENST00000584216 NRIP1P48552 1158 aa15.35■□□□□ 0.05
COPS3-218ENST00000584216 UBE3AQ05086 875 aa15.35■□□□□ 0.05
COPS3-218ENST00000584216 SIGLEC14Q08ET2 396 aa15.35■□□□□ 0.05
COPS3-218ENST00000584216 TROAPQ12815 778 aa15.35■□□□□ 0.05
COPS3-218ENST00000584216 PAK2Q13177 524 aa15.35■□□□□ 0.05
COPS3-218ENST00000584216 SLC35G1Q2M3R5 365 aa15.35■□□□□ 0.05
COPS3-218ENST00000584216 B4GALNT3Q6L9W6 998 aa15.35■□□□□ 0.05
COPS3-218ENST00000584216 KLHL23Q8NBE8 558 aa15.35■□□□□ 0.05
COPS3-218ENST00000584216 CDCA3Q99618 268 aaPredicted RBP15.35■□□□□ 0.05
COPS3-218ENST00000584216 CLEC1BQ9P126 229 aa15.35■□□□□ 0.05
COPS3-218ENST00000584216 USP15Q9Y4E8 981 aaPredicted RBP15.35■□□□□ 0.05
COPS3-218ENST00000584216 SUPT16HQ9Y5B9 1047 aaKnown RBP15.35■□□□□ 0.05
COPS3-218ENST00000584216 PCDHB12Q9Y5F1 795 aa15.35■□□□□ 0.05
COPS3-218ENST00000584216 TRPV2Q9Y5S1 764 aa15.35■□□□□ 0.05
COPS3-218ENST00000584216 MAFGO15525 162 aa15.34■□□□□ 0.05
COPS3-218ENST00000584216 SCG2P13521 617 aa15.34■□□□□ 0.05
COPS3-218ENST00000584216 KCNA2P16389 499 aa15.34■□□□□ 0.05
COPS3-218ENST00000584216 ATF7P17544 494 aaPredicted RBP15.34■□□□□ 0.05
COPS3-218ENST00000584216 MTMR1Q13613 665 aa15.34■□□□□ 0.05
COPS3-218ENST00000584216 PDE12Q6L8Q7 609 aaKnown RBP15.34■□□□□ 0.05
COPS3-218ENST00000584216 USP17L6PQ6QN14 398 aa15.34■□□□□ 0.05
COPS3-218ENST00000584216 CTCFLQ8NI51 663 aaPredicted RBP15.34■□□□□ 0.05
COPS3-218ENST00000584216 MICAL1Q8TDZ2 1067 aa15.34■□□□□ 0.05
COPS3-218ENST00000584216 MAP3K14Q99558 947 aa15.34■□□□□ 0.05
COPS3-218ENST00000584216 LZTS2Q9BRK4 669 aa15.34■□□□□ 0.05
COPS3-218ENST00000584216 SPZ1Q9BXG8 430 aa15.34■□□□□ 0.05
COPS3-218ENST00000584216 FAM49AQ9H0Q0 323 aaPredicted RBP15.34■□□□□ 0.05
COPS3-218ENST00000584216 AZI2Q9H6S1 392 aa15.34■□□□□ 0.05
COPS3-218ENST00000584216 TLE6Q9H808 572 aa15.34■□□□□ 0.05
COPS3-218ENST00000584216 WDFY4Q6ZS81 3184 aa15.33■□□□□ 0.04
COPS3-218ENST00000584216 DNAJB1P25685 340 aa15.33■□□□□ 0.04
COPS3-218ENST00000584216 SMARCA1P28370 1054 aa15.33■□□□□ 0.04
COPS3-218ENST00000584216 NUBP1P53384 320 aa15.33■□□□□ 0.04
COPS3-218ENST00000584216 IGBP1P78318 339 aa15.33■□□□□ 0.04
COPS3-218ENST00000584216 NUCB1Q02818 461 aa15.33■□□□□ 0.04
COPS3-218ENST00000584216 PAN2Q504Q3 1202 aaKnown RBP15.33■□□□□ 0.04
COPS3-218ENST00000584216 ODR4Q5SWX8 454 aa15.33■□□□□ 0.04
COPS3-218ENST00000584216 MARCH8Q5T0T0 291 aa15.33■□□□□ 0.04
COPS3-218ENST00000584216 IER5LQ5T953 404 aa15.33■□□□□ 0.04
COPS3-218ENST00000584216 ADGRD2Q7Z7M1 963 aa15.33■□□□□ 0.04
COPS3-218ENST00000584216 RBM23Q86U06 439 aaKnown RBP15.33■□□□□ 0.04
COPS3-218ENST00000584216 CRIPAKQ8N1N5 446 aa15.33■□□□□ 0.04
COPS3-218ENST00000584216 NCOA7Q8NI08 942 aa15.33■□□□□ 0.04
COPS3-218ENST00000584216 LINC01599Q8WXQ3 324 aa15.33■□□□□ 0.04
COPS3-218ENST00000584216 PIBF1Q8WXW3 757 aa15.33■□□□□ 0.04
COPS3-218ENST00000584216 AGO3Q9H9G7 860 aaKnown RBP15.33■□□□□ 0.04
COPS3-218ENST00000584216 PADI3Q9ULW8 664 aa15.33■□□□□ 0.04
COPS3-218ENST00000584216 BARX2Q9UMQ3 279 aaPredicted RBP15.33■□□□□ 0.04
COPS3-218ENST00000584216 TRPC6Q9Y210 931 aa15.33■□□□□ 0.04
COPS3-218ENST00000584216 TELO2Q9Y4R8 837 aa15.33■□□□□ 0.04
COPS3-218ENST00000584216 IGSF9BQ9UPX0 1349 aa15.33■□□□□ 0.04
COPS3-218ENST00000584216 ZNF318Q5VUA4 2279 aa15.32■□□□□ 0.04
COPS3-218ENST00000584216 GSTTP1A0A1W2PQM5 241 aa15.32■□□□□ 0.04
COPS3-218ENST00000584216 MEIS2O14770 477 aa15.32■□□□□ 0.04
COPS3-218ENST00000584216 INSRRP14616 1297 aa15.32■□□□□ 0.04
COPS3-218ENST00000584216 GNAQP50148 359 aa15.32■□□□□ 0.04
COPS3-218ENST00000584216 TCF15Q12870 199 aa15.32■□□□□ 0.04
COPS3-218ENST00000584216 SPOUT1Q5T280 376 aaKnown RBP15.32■□□□□ 0.04
COPS3-218ENST00000584216 NME8Q8N427 588 aa15.32■□□□□ 0.04
COPS3-218ENST00000584216 RUFY2Q8WXA3 655 aa15.32■□□□□ 0.04
COPS3-218ENST00000584216 RPGRIP1Q96KN7 1286 aa15.32■□□□□ 0.04
COPS3-218ENST00000584216 NEK1Q96PY6 1258 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms