RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.51■□□□□ 0.07
CDK5RAP3-233ENST00000584186 TRIM22Q8IYM9 498 aa15.51■□□□□ 0.07
CDK5RAP3-233ENST00000584186 MICALL1Q8N3F8 863 aa15.51■□□□□ 0.07
CDK5RAP3-233ENST00000584186 CCDC148Q8NFR7 591 aa15.51■□□□□ 0.07
CDK5RAP3-233ENST00000584186 BICD2Q8TD16 824 aa15.51■□□□□ 0.07
CDK5RAP3-233ENST00000584186 ARNTL2Q8WYA1 636 aa15.51■□□□□ 0.07
CDK5RAP3-233ENST00000584186 ZBTB10Q96DT7 871 aa15.51■□□□□ 0.07
CDK5RAP3-233ENST00000584186 PCYT2Q99447 389 aa15.51■□□□□ 0.07
CDK5RAP3-233ENST00000584186 TM6SF1Q9BZW5 370 aa15.51■□□□□ 0.07
CDK5RAP3-233ENST00000584186 TUBE1Q9UJT0 475 aa15.51■□□□□ 0.07
CDK5RAP3-233ENST00000584186 TRPC6Q9Y210 931 aa15.51■□□□□ 0.07
CDK5RAP3-233ENST00000584186 REV3LO60673 3130 aa15.5■□□□□ 0.07
CDK5RAP3-233ENST00000584186 TRANK1O15050 2925 aa15.5■□□□□ 0.07
CDK5RAP3-233ENST00000584186 LCHNA4D1U4 455 aa15.5■□□□□ 0.07
CDK5RAP3-233ENST00000584186 BACH1O14867 736 aa15.5■□□□□ 0.07
CDK5RAP3-233ENST00000584186 ARHGEF15O94989 841 aa15.5■□□□□ 0.07
CDK5RAP3-233ENST00000584186 CENPBP07199 599 aaPredicted RBP15.5■□□□□ 0.07
CDK5RAP3-233ENST00000584186 STAT5BP51692 787 aa15.5■□□□□ 0.07
CDK5RAP3-233ENST00000584186 TAP1Q03518 808 aa15.5■□□□□ 0.07
CDK5RAP3-233ENST00000584186 SSRP1Q08945 709 aaKnown RBP15.5■□□□□ 0.07
CDK5RAP3-233ENST00000584186 PLEKHG4Q58EX7 1191 aa15.5■□□□□ 0.07
CDK5RAP3-233ENST00000584186 MCTP2Q6DN12 878 aa15.5■□□□□ 0.07
CDK5RAP3-233ENST00000584186 TAF2Q6P1X5 1199 aa15.5■□□□□ 0.07
CDK5RAP3-233ENST00000584186 NIPA1Q7RTP0 329 aa15.5■□□□□ 0.07
CDK5RAP3-233ENST00000584186 RSPH3Q86UC2 560 aa15.5■□□□□ 0.07
CDK5RAP3-233ENST00000584186 SEPT8Q92599 483 aa15.5■□□□□ 0.07
CDK5RAP3-233ENST00000584186 ZNF577Q9BSK1 485 aa15.5■□□□□ 0.07
CDK5RAP3-233ENST00000584186 OSBPL7Q9BZF2 842 aa15.5■□□□□ 0.07
CDK5RAP3-233ENST00000584186 IPO5O00410 1097 aaKnown RBP15.49■□□□□ 0.07
CDK5RAP3-233ENST00000584186 GJB5O95377 273 aa15.49■□□□□ 0.07
CDK5RAP3-233ENST00000584186 CCNE2O96020 404 aa15.49■□□□□ 0.07
CDK5RAP3-233ENST00000584186 AMHP03971 560 aa15.49■□□□□ 0.07
CDK5RAP3-233ENST00000584186 CYP3A4P08684 503 aa15.49■□□□□ 0.07
CDK5RAP3-233ENST00000584186 INSRRP14616 1297 aa15.49■□□□□ 0.07
CDK5RAP3-233ENST00000584186 NLRP5P59047 1200 aa15.49■□□□□ 0.07
CDK5RAP3-233ENST00000584186 MARCH8Q5T0T0 291 aa15.49■□□□□ 0.07
CDK5RAP3-233ENST00000584186 MYOCDQ8IZQ8 938 aa15.49■□□□□ 0.07
CDK5RAP3-233ENST00000584186 DNAJB3Q8WWF6 145 aa15.49■□□□□ 0.07
CDK5RAP3-233ENST00000584186 ZNF274Q96GC6 653 aaPredicted RBP15.49■□□□□ 0.07
CDK5RAP3-233ENST00000584186 FAM49AQ9H0Q0 323 aaPredicted RBP15.49■□□□□ 0.07
CDK5RAP3-233ENST00000584186 VCANP13611 3396 aa15.49■□□□□ 0.07
CDK5RAP3-233ENST00000584186 IGLV3-22A0A075B6J6 115 aa15.48■□□□□ 0.07
CDK5RAP3-233ENST00000584186 CHRNA1P02708 482 aa15.48■□□□□ 0.07
CDK5RAP3-233ENST00000584186 GHRP10912 638 aa15.48■□□□□ 0.07
CDK5RAP3-233ENST00000584186 PLCB4Q15147 1175 aa15.48■□□□□ 0.07
CDK5RAP3-233ENST00000584186 PRR16Q569H4 304 aa15.48■□□□□ 0.07
CDK5RAP3-233ENST00000584186 CPLX2Q6PUV4 134 aaKnown RBP15.48■□□□□ 0.07
CDK5RAP3-233ENST00000584186 PLPPR4Q7Z2D5 763 aa15.48■□□□□ 0.07
CDK5RAP3-233ENST00000584186 SPRED2Q7Z698 418 aa15.48■□□□□ 0.07
CDK5RAP3-233ENST00000584186 TRAPPC12Q8WVT3 735 aa15.48■□□□□ 0.07
CDK5RAP3-233ENST00000584186 CRYGNQ8WXF5 182 aa15.48■□□□□ 0.07
CDK5RAP3-233ENST00000584186 TNPO1Q92973 898 aaKnown RBP15.48■□□□□ 0.07
CDK5RAP3-233ENST00000584186 RAD9AQ99638 391 aa15.48■□□□□ 0.07
CDK5RAP3-233ENST00000584186 PRDM6Q9NQX0 595 aa15.48■□□□□ 0.07
CDK5RAP3-233ENST00000584186 TCEAL9Q9UHQ7 104 aa15.48■□□□□ 0.07
CDK5RAP3-233ENST00000584186 MTUS1Q9ULD2 1270 aa15.48■□□□□ 0.07
CDK5RAP3-233ENST00000584186 POTEB3A0JP26 581 aa15.47■□□□□ 0.07
CDK5RAP3-233ENST00000584186 MBLAC1A4D2B0 266 aaPredicted RBP15.47■□□□□ 0.07
CDK5RAP3-233ENST00000584186 EPOPA6NHQ4 379 aa15.47■□□□□ 0.07
CDK5RAP3-233ENST00000584186 RRN3P2A6NIE6 340 aa15.47■□□□□ 0.07
CDK5RAP3-233ENST00000584186 UPP2O95045 317 aa15.47■□□□□ 0.07
CDK5RAP3-233ENST00000584186 SETQ01105 290 aaPredicted RBP15.47■□□□□ 0.07
CDK5RAP3-233ENST00000584186 MYO9BQ13459 2157 aa15.47■□□□□ 0.07
CDK5RAP3-233ENST00000584186 FAM26DQ5JW98 314 aa15.47■□□□□ 0.07
CDK5RAP3-233ENST00000584186 FAM160B1Q5W0V3 765 aa15.47■□□□□ 0.07
CDK5RAP3-233ENST00000584186 MIS18BP1Q6P0N0 1132 aa15.47■□□□□ 0.07
CDK5RAP3-233ENST00000584186 POTEBQ6S5H4 581 aa15.47■□□□□ 0.07
CDK5RAP3-233ENST00000584186 IFIH1Q9BYX4 1025 aaKnown RBP15.47■□□□□ 0.07
CDK5RAP3-233ENST00000584186 SH3GLB2Q9NR46 395 aa15.47■□□□□ 0.07
CDK5RAP3-233ENST00000584186 PTPRSQ13332 1948 aa15.47■□□□□ 0.07
CDK5RAP3-233ENST00000584186 KAT6AQ92794 2004 aa15.46■□□□□ 0.07
CDK5RAP3-233ENST00000584186 DHX15O43143 795 aaKnown RBP15.46■□□□□ 0.07
CDK5RAP3-233ENST00000584186 GTPBP6O43824 516 aaPredicted RBP15.46■□□□□ 0.07
CDK5RAP3-233ENST00000584186 ATG7O95352 703 aa15.46■□□□□ 0.07
CDK5RAP3-233ENST00000584186 DEXIO95424 95 aa15.46■□□□□ 0.07
CDK5RAP3-233ENST00000584186 TMEM62Q0P6H9 643 aa15.46■□□□□ 0.07
CDK5RAP3-233ENST00000584186 SWSAP1Q6NVH7 229 aa15.46■□□□□ 0.07
CDK5RAP3-233ENST00000584186 PDXDC2PQ6P474 469 aa15.46■□□□□ 0.07
CDK5RAP3-233ENST00000584186 ABHD15Q6UXT9 468 aa15.46■□□□□ 0.07
CDK5RAP3-233ENST00000584186 TRMT1LQ7Z2T5 733 aaKnown RBP15.46■□□□□ 0.07
CDK5RAP3-233ENST00000584186 CKAP2LQ8IYA6 745 aa15.46■□□□□ 0.07
CDK5RAP3-233ENST00000584186 AIFM3Q96NN9 605 aa15.46■□□□□ 0.07
CDK5RAP3-233ENST00000584186 COL25A1Q9BXS0 654 aaPredicted RBP15.46■□□□□ 0.07
CDK5RAP3-233ENST00000584186 ZNF302Q9NR11 478 aa15.46■□□□□ 0.07
CDK5RAP3-233ENST00000584186 TBC1D22BQ9NU19 505 aa15.46■□□□□ 0.07
CDK5RAP3-233ENST00000584186 SAMM50Q9Y512 469 aa15.46■□□□□ 0.07
CDK5RAP3-233ENST00000584186 CDY2AQ9Y6F7 541 aa15.46■□□□□ 0.07
CDK5RAP3-233ENST00000584186 XIRP2A4UGR9 3374 aa15.45■□□□□ 0.06
CDK5RAP3-233ENST00000584186 DTNBO60941 627 aa15.45■□□□□ 0.06
CDK5RAP3-233ENST00000584186 SLC26A2P50443 739 aa15.45■□□□□ 0.06
CDK5RAP3-233ENST00000584186 MRPS6P82932 125 aaKnown RBP15.45■□□□□ 0.06
CDK5RAP3-233ENST00000584186 MGAT3Q09327 533 aa15.45■□□□□ 0.06
CDK5RAP3-233ENST00000584186 SKIV2LQ15477 1246 aaKnown RBP15.45■□□□□ 0.06
CDK5RAP3-233ENST00000584186 IER5Q5VY09 327 aa15.45■□□□□ 0.06
CDK5RAP3-233ENST00000584186 KRT40Q6A162 431 aa15.45■□□□□ 0.06
CDK5RAP3-233ENST00000584186 RPAINQ86UA6 219 aa15.45■□□□□ 0.06
CDK5RAP3-233ENST00000584186 CCDC60Q8IWA6 550 aaPredicted RBP15.45■□□□□ 0.06
CDK5RAP3-233ENST00000584186 APBB2Q92870 758 aa15.45■□□□□ 0.06
CDK5RAP3-233ENST00000584186 SLKQ9H2G2 1235 aaPredicted RBP15.45■□□□□ 0.06
CDK5RAP3-233ENST00000584186 TPCN1Q9ULQ1 816 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms