RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 WDR64B1ANS9 1081 aa9.39□□□□□ -0.91
ERBB2-216ENST00000584014 EML1O00423 815 aa9.39□□□□□ -0.91
ERBB2-216ENST00000584014 TBX3O15119 743 aa9.39□□□□□ -0.91
ERBB2-216ENST00000584014 SUPT20HL2P0C7V6 817 aa9.39□□□□□ -0.91
ERBB2-216ENST00000584014 MNX1P50219 401 aaPredicted RBP9.39□□□□□ -0.91
ERBB2-216ENST00000584014 VASPP50552 380 aaPredicted RBP9.39□□□□□ -0.91
ERBB2-216ENST00000584014 STAT5BP51692 787 aa9.39□□□□□ -0.91
ERBB2-216ENST00000584014 NUCB2P80303 420 aa9.39□□□□□ -0.91
ERBB2-216ENST00000584014 DNM1Q05193 864 aaKnown RBP9.39□□□□□ -0.91
ERBB2-216ENST00000584014 CTTNQ14247 550 aaKnown RBP9.39□□□□□ -0.91
ERBB2-216ENST00000584014 CCSAPQ6IQ19 270 aaPredicted RBP9.39□□□□□ -0.91
ERBB2-216ENST00000584014 ZNF746Q6NUN9 644 aaPredicted RBP9.39□□□□□ -0.91
ERBB2-216ENST00000584014 SLC39A5Q6ZMH5 540 aa9.39□□□□□ -0.91
ERBB2-216ENST00000584014 TPH2Q8IWU9 490 aa9.39□□□□□ -0.91
ERBB2-216ENST00000584014 RASSF8Q8NHQ8 419 aa9.39□□□□□ -0.91
ERBB2-216ENST00000584014 USP28Q96RU2 1077 aa9.39□□□□□ -0.91
ERBB2-216ENST00000584014 SMARCAD1Q9H4L7 1026 aa9.39□□□□□ -0.91
ERBB2-216ENST00000584014 KCNMB3Q9NPA1 279 aa9.39□□□□□ -0.91
ERBB2-216ENST00000584014 PRDM5Q9NQX1 630 aaPredicted RBP9.39□□□□□ -0.91
ERBB2-216ENST00000584014 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.39□□□□□ -0.91
ERBB2-216ENST00000584014 RGL1Q9NZL6 768 aa9.39□□□□□ -0.91
ERBB2-216ENST00000584014 NOD1Q9Y239 953 aa9.39□□□□□ -0.91
ERBB2-216ENST00000584014 ZDHHC9Q9Y397 364 aa9.39□□□□□ -0.91
ERBB2-216ENST00000584014 A0A087WWV3 80 aa9.38□□□□□ -0.91
ERBB2-216ENST00000584014 A0A0U1RQG5 324 aaPredicted RBP9.38□□□□□ -0.91
ERBB2-216ENST00000584014 DDX11L8A8MPP1 907 aa9.38□□□□□ -0.91
ERBB2-216ENST00000584014 CABYRO75952 493 aa9.38□□□□□ -0.91
ERBB2-216ENST00000584014 BRD1O95696 1058 aa9.38□□□□□ -0.91
ERBB2-216ENST00000584014 CST5P28325 142 aaPredicted RBP9.38□□□□□ -0.91
ERBB2-216ENST00000584014 CDC25AP30304 524 aa9.38□□□□□ -0.91
ERBB2-216ENST00000584014 SFNP31947 248 aa9.38□□□□□ -0.91
ERBB2-216ENST00000584014 JAK3P52333 1124 aa9.38□□□□□ -0.91
ERBB2-216ENST00000584014 RTP1P59025 263 aa9.38□□□□□ -0.91
ERBB2-216ENST00000584014 LRRC26Q2I0M4 334 aa9.38□□□□□ -0.91
ERBB2-216ENST00000584014 TRIM60Q495X7 471 aa9.38□□□□□ -0.91
ERBB2-216ENST00000584014 ABHD15Q6UXT9 468 aa9.38□□□□□ -0.91
ERBB2-216ENST00000584014 CCDC60Q8IWA6 550 aaPredicted RBP9.38□□□□□ -0.91
ERBB2-216ENST00000584014 SMAP1Q8IYB5 467 aaPredicted RBP9.38□□□□□ -0.91
ERBB2-216ENST00000584014 C7orf61Q8IZ16 206 aa9.38□□□□□ -0.91
ERBB2-216ENST00000584014 ERMNQ8TAM6 284 aa9.38□□□□□ -0.91
ERBB2-216ENST00000584014 KAT2BQ92831 832 aa9.38□□□□□ -0.91
ERBB2-216ENST00000584014 DYDC2Q96IM9 177 aa9.38□□□□□ -0.91
ERBB2-216ENST00000584014 CCDC43Q96MW1 224 aaKnown RBP9.38□□□□□ -0.91
ERBB2-216ENST00000584014 IPO9Q96P70 1041 aaKnown RBP9.38□□□□□ -0.91
ERBB2-216ENST00000584014 MTMR9Q96QG7 549 aa9.38□□□□□ -0.91
ERBB2-216ENST00000584014 PLIN2Q99541 437 aa9.38□□□□□ -0.91
ERBB2-216ENST00000584014 SH2D3AQ9BRG2 576 aa9.38□□□□□ -0.91
ERBB2-216ENST00000584014 C16orf70Q9BSU1 422 aa9.38□□□□□ -0.91
ERBB2-216ENST00000584014 HTATIP2Q9BUP3 242 aa9.38□□□□□ -0.91
ERBB2-216ENST00000584014 KATNAL1Q9BW62 490 aa9.38□□□□□ -0.91
ERBB2-216ENST00000584014 RAB34Q9BZG1 259 aa9.38□□□□□ -0.91
ERBB2-216ENST00000584014 TRPV6Q9H1D0 765 aa9.38□□□□□ -0.91
ERBB2-216ENST00000584014 RNPEPQ9H4A4 650 aa9.38□□□□□ -0.91
ERBB2-216ENST00000584014 SETD4Q9NVD3 440 aa9.38□□□□□ -0.91
ERBB2-216ENST00000584014 ERAP1Q9NZ08 941 aa9.38□□□□□ -0.91
ERBB2-216ENST00000584014 PCDH10Q9P2E7 1040 aa9.38□□□□□ -0.91
ERBB2-216ENST00000584014 LRWD1Q9UFC0 647 aa9.38□□□□□ -0.91
ERBB2-216ENST00000584014 SEPT9Q9UHD8 586 aaPredicted RBP9.38□□□□□ -0.91
ERBB2-216ENST00000584014 VAV3Q9UKW4 847 aa9.38□□□□□ -0.91
ERBB2-216ENST00000584014 MYH15Q9Y2K3 1946 aa9.38□□□□□ -0.91
ERBB2-216ENST00000584014 MYH9P35579 1960 aaKnown RBP9.37□□□□□ -0.91
ERBB2-216ENST00000584014 POTEB3A0JP26 581 aa9.37□□□□□ -0.91
ERBB2-216ENST00000584014 PP2D1A8MPX8 630 aa9.37□□□□□ -0.91
ERBB2-216ENST00000584014 DCDC2CA8MYV0 355 aa9.37□□□□□ -0.91
ERBB2-216ENST00000584014 ARVCFO00192 962 aa9.37□□□□□ -0.91
ERBB2-216ENST00000584014 TLR3O15455 904 aaKnown RBP9.37□□□□□ -0.91
ERBB2-216ENST00000584014 EVI5O60447 810 aa9.37□□□□□ -0.91
ERBB2-216ENST00000584014 PRR29P0C7W0 189 aa9.37□□□□□ -0.91
ERBB2-216ENST00000584014 SMIM10L2AP0DMW4 78 aa9.37□□□□□ -0.91
ERBB2-216ENST00000584014 SMIM10L2BP0DMW5 78 aa9.37□□□□□ -0.91
ERBB2-216ENST00000584014 CCT6AP40227 531 aaKnown RBP9.37□□□□□ -0.91
ERBB2-216ENST00000584014 ZNF200P98182 395 aaPredicted RBP9.37□□□□□ -0.91
ERBB2-216ENST00000584014 TLE2Q04725 743 aa9.37□□□□□ -0.91
ERBB2-216ENST00000584014 PPFIA1Q13136 1202 aa9.37□□□□□ -0.91
ERBB2-216ENST00000584014 PPP2R5CQ13362 524 aa9.37□□□□□ -0.91
ERBB2-216ENST00000584014 ORC2Q13416 577 aaPredicted RBP9.37□□□□□ -0.91
ERBB2-216ENST00000584014 UGCGQ16739 394 aa9.37□□□□□ -0.91
ERBB2-216ENST00000584014 SPECC1Q5M775 1068 aa9.37□□□□□ -0.91
ERBB2-216ENST00000584014 POTEBQ6S5H4 581 aa9.37□□□□□ -0.91
ERBB2-216ENST00000584014 KCTD17Q8N5Z5 321 aa9.37□□□□□ -0.91
ERBB2-216ENST00000584014 C4orf32Q8N8J7 132 aa9.37□□□□□ -0.91
ERBB2-216ENST00000584014 TRAPPC12Q8WVT3 735 aa9.37□□□□□ -0.91
ERBB2-216ENST00000584014 ATP6V0A1Q93050 837 aa9.37□□□□□ -0.91
ERBB2-216ENST00000584014 CDK5RAP3Q96JB5 506 aa9.37□□□□□ -0.91
ERBB2-216ENST00000584014 PCYT2Q99447 389 aa9.37□□□□□ -0.91
ERBB2-216ENST00000584014 EIF2AK1Q9BQI3 630 aaKnown RBP9.37□□□□□ -0.91
ERBB2-216ENST00000584014 BMP2KQ9NSY1 1161 aaPredicted RBP9.37□□□□□ -0.91
ERBB2-216ENST00000584014 TRMT13Q9NUP7 481 aaKnown RBP9.37□□□□□ -0.91
ERBB2-216ENST00000584014 HDAC6Q9UBN7 1215 aa9.37□□□□□ -0.91
ERBB2-216ENST00000584014 CFAP45Q9UL16 551 aa9.37□□□□□ -0.91
ERBB2-216ENST00000584014 ATP6V1DQ9Y5K8 247 aa9.37□□□□□ -0.91
ERBB2-216ENST00000584014 DNAH12Q6ZR08 3092 aa9.37□□□□□ -0.91
ERBB2-216ENST00000584014 GRIN2DO15399 1336 aa9.36□□□□□ -0.91
ERBB2-216ENST00000584014 KAT6AQ92794 2004 aa9.36□□□□□ -0.91
ERBB2-216ENST00000584014 C17orf102A2RUQ5 167 aa9.36□□□□□ -0.91
ERBB2-216ENST00000584014 TMEM150BA6NC51 233 aa9.36□□□□□ -0.91
ERBB2-216ENST00000584014 LAD1O00515 517 aa9.36□□□□□ -0.91
ERBB2-216ENST00000584014 SPTLC2O15270 562 aa9.36□□□□□ -0.91
ERBB2-216ENST00000584014 ATG7O95352 703 aa9.36□□□□□ -0.91
ERBB2-216ENST00000584014 BMP15O95972 392 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms