RNA–Protein interactions for RNA: ENST00000582486.5

GGA3-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5 BASIC

Gene GGA3, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-213ENST00000582486 SCFD1Q8WVM8 642 aa12.43□□□□□ -0.42
GGA3-213ENST00000582486 CNOT6LQ96LI5 555 aaKnown RBP12.43□□□□□ -0.42
GGA3-213ENST00000582486 PAGR1Q9BTK6 254 aa12.43□□□□□ -0.42
GGA3-213ENST00000582486 ZNF408Q9H9D4 720 aa12.43□□□□□ -0.42
GGA3-213ENST00000582486 AGTPBP1Q9UPW5 1226 aa12.43□□□□□ -0.42
GGA3-213ENST00000582486 RGS20O76081 388 aa12.42□□□□□ -0.42
GGA3-213ENST00000582486 HERVK_113P62684 666 aa12.42□□□□□ -0.42
GGA3-213ENST00000582486 UBXN1Q04323 297 aa12.42□□□□□ -0.42
GGA3-213ENST00000582486 LRRC63Q05C16 580 aa12.42□□□□□ -0.42
GGA3-213ENST00000582486 LDLRAD1Q5T700 205 aa12.42□□□□□ -0.42
GGA3-213ENST00000582486 CEP135Q66GS9 1140 aa12.42□□□□□ -0.42
GGA3-213ENST00000582486 C1orf186Q6ZWK4 172 aa12.42□□□□□ -0.42
GGA3-213ENST00000582486 SFR1Q86XK3 245 aa12.42□□□□□ -0.42
GGA3-213ENST00000582486 RIOX2Q8IUF8 465 aa12.42□□□□□ -0.42
GGA3-213ENST00000582486 NELFCDQ8IXH7 590 aa12.42□□□□□ -0.42
GGA3-213ENST00000582486 SPATC1LQ9H0A9 340 aa12.42□□□□□ -0.42
GGA3-213ENST00000582486 LOC285556D6RIA3 1793 aa12.42□□□□□ -0.42
GGA3-213ENST00000582486 SFI1A8K8P3 1242 aa12.42□□□□□ -0.42
GGA3-213ENST00000582486 PES1O00541 588 aaKnown RBP12.42□□□□□ -0.42
GGA3-213ENST00000582486 NKRFO15226 690 aaKnown RBP eCLIP12.42□□□□□ -0.42
GGA3-213ENST00000582486 OFD1O75665 1012 aa12.42□□□□□ -0.42
GGA3-213ENST00000582486 GJA5P36382 358 aa12.42□□□□□ -0.42
GGA3-213ENST00000582486 CASP5P51878 434 aa12.42□□□□□ -0.42
GGA3-213ENST00000582486 NCAPG2Q86XI2 1143 aa12.42□□□□□ -0.42
GGA3-213ENST00000582486 FAM114A1Q8IWE2 563 aa12.42□□□□□ -0.42
GGA3-213ENST00000582486 TC2NQ8N9U0 490 aa12.42□□□□□ -0.42
GGA3-213ENST00000582486 NEK9Q8TD19 979 aa12.42□□□□□ -0.42
GGA3-213ENST00000582486 GPRASP2Q96D09 838 aa12.42□□□□□ -0.42
GGA3-213ENST00000582486 INPP4AQ96PE3 977 aaPredicted RBP12.42□□□□□ -0.42
GGA3-213ENST00000582486 TUBGCP2Q9BSJ2 902 aa12.42□□□□□ -0.42
GGA3-213ENST00000582486 TMX1Q9H3N1 280 aa12.42□□□□□ -0.42
GGA3-213ENST00000582486 MAFGO15525 162 aa12.41□□□□□ -0.42
GGA3-213ENST00000582486 CCNE2O96020 404 aa12.41□□□□□ -0.42
GGA3-213ENST00000582486 CNTN2Q02246 1040 aa12.41□□□□□ -0.42
GGA3-213ENST00000582486 RBL2Q08999 1139 aa12.41□□□□□ -0.42
GGA3-213ENST00000582486 ZCWPW2Q504Y3 356 aa12.41□□□□□ -0.42
GGA3-213ENST00000582486 NLRX1Q86UT6 975 aa12.41□□□□□ -0.42
GGA3-213ENST00000582486 CPLX3Q8WVH0 158 aa12.41□□□□□ -0.42
GGA3-213ENST00000582486 SLC10A4Q96EP9 437 aa12.41□□□□□ -0.42
GGA3-213ENST00000582486 TSG101Q99816 390 aa12.41□□□□□ -0.42
GGA3-213ENST00000582486 MAF1Q9H063 256 aa12.41□□□□□ -0.42
GGA3-213ENST00000582486 ZSWIM4Q9H7M6 989 aa12.41□□□□□ -0.42
GGA3-213ENST00000582486 LGALS16A8MUM7 142 aa12.4□□□□□ -0.42
GGA3-213ENST00000582486 TBCAO75347 108 aaKnown RBP12.4□□□□□ -0.42
GGA3-213ENST00000582486 CNMDO75829 334 aa12.4□□□□□ -0.42
GGA3-213ENST00000582486 QARSP47897 775 aaKnown RBP12.4□□□□□ -0.42
GGA3-213ENST00000582486 GPAT2Q6NUI2 795 aa12.4□□□□□ -0.42
GGA3-213ENST00000582486 FASTKD5Q7L8L6 764 aaKnown RBP12.4□□□□□ -0.42
GGA3-213ENST00000582486 R3HDMLQ9H3Y0 253 aa12.4□□□□□ -0.42
GGA3-213ENST00000582486 TXNRD2Q9NNW7 524 aa12.4□□□□□ -0.42
GGA3-213ENST00000582486 FBXO40Q9UH90 709 aa12.4□□□□□ -0.42
GGA3-213ENST00000582486 COL4A3BPQ9Y5P4 624 aa12.4□□□□□ -0.42
GGA3-213ENST00000582486 ASTN1O14525 1302 aa12.4□□□□□ -0.42
GGA3-213ENST00000582486 ITIH6Q6UXX5 1313 aa12.4□□□□□ -0.42
GGA3-213ENST00000582486 A0A0G2JMZ2 1700 aa12.4□□□□□ -0.42
GGA3-213ENST00000582486 B4DLN1 442 aa12.4□□□□□ -0.42
GGA3-213ENST00000582486 NRDCO43847 1150 aa12.4□□□□□ -0.42
GGA3-213ENST00000582486 MTIF2P46199 727 aaKnown RBP12.4□□□□□ -0.42
GGA3-213ENST00000582486 FSTL1Q12841 308 aa12.4□□□□□ -0.42
GGA3-213ENST00000582486 DNTTIP2Q5QJE6 756 aaKnown RBP12.4□□□□□ -0.42
GGA3-213ENST00000582486 LRRC55Q6ZSA7 311 aa12.4□□□□□ -0.42
GGA3-213ENST00000582486 PPFIBP1Q86W92 1011 aa12.4□□□□□ -0.42
GGA3-213ENST00000582486 DNERQ8NFT8 737 aa12.4□□□□□ -0.42
GGA3-213ENST00000582486 ZNF507Q8TCN5 953 aa12.4□□□□□ -0.42
GGA3-213ENST00000582486 MOV10L1Q9BXT6 1211 aaKnown RBP12.4□□□□□ -0.42
GGA3-213ENST00000582486 KCTD10Q9H3F6 313 aa12.4□□□□□ -0.42
GGA3-213ENST00000582486 PFASO15067 1338 aa12.4□□□□□ -0.43
GGA3-213ENST00000582486 ARHGEF35A5YM69 484 aa12.39□□□□□ -0.43
GGA3-213ENST00000582486 USP27XA6NNY8 438 aa12.39□□□□□ -0.43
GGA3-213ENST00000582486 WDR64B1ANS9 1081 aa12.39□□□□□ -0.43
GGA3-213ENST00000582486 AKR1B15C9JRZ8 316 aaPredicted RBP12.39□□□□□ -0.43
GGA3-213ENST00000582486 FAM13AO94988 1023 aa12.39□□□□□ -0.43
GGA3-213ENST00000582486 KIF20AO95235 890 aa12.39□□□□□ -0.43
GGA3-213ENST00000582486 FGFR1OPO95684 399 aaKnown RBP12.39□□□□□ -0.43
GGA3-213ENST00000582486 MYBP10242 640 aa12.39□□□□□ -0.43
GGA3-213ENST00000582486 KCNA2P16389 499 aa12.39□□□□□ -0.43
GGA3-213ENST00000582486 ERCC3P19447 782 aa12.39□□□□□ -0.43
GGA3-213ENST00000582486 KRT76Q01546 638 aa12.39□□□□□ -0.43
GGA3-213ENST00000582486 UGCGQ16739 394 aa12.39□□□□□ -0.43
GGA3-213ENST00000582486 Q3C1V9 767 aa12.39□□□□□ -0.43
GGA3-213ENST00000582486 FOXR2Q6PJQ5 311 aa12.39□□□□□ -0.43
GGA3-213ENST00000582486 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.39□□□□□ -0.43
GGA3-213ENST00000582486 EPM2AIP1Q7L775 607 aaPredicted RBP12.39□□□□□ -0.43
GGA3-213ENST00000582486 TRMT1LQ7Z2T5 733 aaKnown RBP12.39□□□□□ -0.43
GGA3-213ENST00000582486 TMEM139Q8IV31 216 aa12.39□□□□□ -0.43
GGA3-213ENST00000582486 MYCT1Q8N699 235 aa12.39□□□□□ -0.43
GGA3-213ENST00000582486 CCDC112Q8NEF3 446 aa12.39□□□□□ -0.43
GGA3-213ENST00000582486 IWS1Q96ST2 819 aa12.39□□□□□ -0.43
GGA3-213ENST00000582486 NOC4LQ9BVI4 516 aaKnown RBP12.39□□□□□ -0.43
GGA3-213ENST00000582486 MRPL44Q9H9J2 332 aaKnown RBP12.39□□□□□ -0.43
GGA3-213ENST00000582486 RBPJLQ9UBG7 517 aa12.39□□□□□ -0.43
GGA3-213ENST00000582486 TCEAL9Q9UHQ7 104 aa12.39□□□□□ -0.43
GGA3-213ENST00000582486 LCTP09848 1927 aa12.39□□□□□ -0.43
GGA3-213ENST00000582486 KIAA1217Q5T5P2 1943 aa12.39□□□□□ -0.43
GGA3-213ENST00000582486 STAM2O75886 525 aa12.39□□□□□ -0.43
GGA3-213ENST00000582486 PRPF6O94906 941 aaKnown RBP12.39□□□□□ -0.43
GGA3-213ENST00000582486 GYPCP04921 128 aa12.39□□□□□ -0.43
GGA3-213ENST00000582486 OSBPP22059 807 aa12.39□□□□□ -0.43
GGA3-213ENST00000582486 CASP14P31944 242 aa12.39□□□□□ -0.43
GGA3-213ENST00000582486 SFNP31947 248 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms