RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 CCL15-CCL14A0A0B4J2E2 113 aa16.26■□□□□ 0.19
MKS1-211ENST00000581761 MUTP22033 750 aa16.26■□□□□ 0.19
MKS1-211ENST00000581761 SFPQP23246 707 aaKnown RBP eCLIP16.26■□□□□ 0.19
MKS1-211ENST00000581761 INHBEP58166 350 aa16.26■□□□□ 0.19
MKS1-211ENST00000581761 IRX3P78415 501 aaPredicted RBP16.26■□□□□ 0.19
MKS1-211ENST00000581761 CACNB1Q02641 598 aaPredicted RBP16.26■□□□□ 0.19
MKS1-211ENST00000581761 SREBF2Q12772 1141 aa16.26■□□□□ 0.19
MKS1-211ENST00000581761 MTMR1Q13613 665 aa16.26■□□□□ 0.19
MKS1-211ENST00000581761 CCL15Q16663 113 aa16.26■□□□□ 0.19
MKS1-211ENST00000581761 TCP11X2Q5H9J9 407 aa16.26■□□□□ 0.19
MKS1-211ENST00000581761 ARMCX5Q6P1M9 558 aa16.26■□□□□ 0.19
MKS1-211ENST00000581761 B3GNT9Q6UX72 402 aa16.26■□□□□ 0.19
MKS1-211ENST00000581761 CREBRFQ8IUR6 639 aa16.26■□□□□ 0.19
MKS1-211ENST00000581761 C17orf53Q8N3J3 647 aaPredicted RBP16.26■□□□□ 0.19
MKS1-211ENST00000581761 GUF1Q8N442 669 aaKnown RBP16.26■□□□□ 0.19
MKS1-211ENST00000581761 CHST13Q8NET6 341 aa16.26■□□□□ 0.19
MKS1-211ENST00000581761 KIAA1524Q8TCG1 905 aa16.26■□□□□ 0.19
MKS1-211ENST00000581761 NEK9Q8TD19 979 aa16.26■□□□□ 0.19
MKS1-211ENST00000581761 DUSP9Q99956 384 aaKnown RBP16.26■□□□□ 0.19
MKS1-211ENST00000581761 TAB2Q9NYJ8 693 aa16.26■□□□□ 0.19
MKS1-211ENST00000581761 ADD3Q9UEY8 706 aaKnown RBP16.26■□□□□ 0.19
MKS1-211ENST00000581761 SLITRK3O94933 977 aa16.25■□□□□ 0.19
MKS1-211ENST00000581761 RAD51AP2Q09MP3 1159 aa16.25■□□□□ 0.19
MKS1-211ENST00000581761 ITGB3BPQ13352 177 aaPredicted RBP16.25■□□□□ 0.19
MKS1-211ENST00000581761 SNAPC2Q13487 334 aa16.25■□□□□ 0.19
MKS1-211ENST00000581761 ARSHQ5FYA8 562 aa16.25■□□□□ 0.19
MKS1-211ENST00000581761 ANKRD40Q6AI12 368 aa16.25■□□□□ 0.19
MKS1-211ENST00000581761 LBX2Q6XYB7 198 aa16.25■□□□□ 0.19
MKS1-211ENST00000581761 NLRX1Q86UT6 975 aa16.25■□□□□ 0.19
MKS1-211ENST00000581761 FAM114A1Q8IWE2 563 aa16.25■□□□□ 0.19
MKS1-211ENST00000581761 CSGALNACT2Q8N6G5 542 aa16.25■□□□□ 0.19
MKS1-211ENST00000581761 MB21D1Q8N884 522 aa16.25■□□□□ 0.19
MKS1-211ENST00000581761 NSUN6Q8TEA1 469 aaKnown RBP16.25■□□□□ 0.19
MKS1-211ENST00000581761 TSG101Q99816 390 aa16.25■□□□□ 0.19
MKS1-211ENST00000581761 BHMT2Q9H2M3 363 aa16.25■□□□□ 0.19
MKS1-211ENST00000581761 SEMA6BQ9H3T3 888 aa16.25■□□□□ 0.19
MKS1-211ENST00000581761 ZHX3Q9H4I2 956 aa16.25■□□□□ 0.19
MKS1-211ENST00000581761 A1CFQ9NQ94 594 aaKnown RBP16.25■□□□□ 0.19
MKS1-211ENST00000581761 CYP39A1Q9NYL5 469 aa16.25■□□□□ 0.19
MKS1-211ENST00000581761 FRMD3A2A2Y4 597 aa16.24■□□□□ 0.19
MKS1-211ENST00000581761 BTBD19C9JJ37 291 aa16.24■□□□□ 0.19
MKS1-211ENST00000581761 N4BP3O15049 544 aa16.24■□□□□ 0.19
MKS1-211ENST00000581761 DHX15O43143 795 aaKnown RBP16.24■□□□□ 0.19
MKS1-211ENST00000581761 TEX33O43247 280 aa16.24■□□□□ 0.19
MKS1-211ENST00000581761 NRDCO43847 1150 aa16.24■□□□□ 0.19
MKS1-211ENST00000581761 TBC1D8O95759 1140 aa16.24■□□□□ 0.19
MKS1-211ENST00000581761 NR3C2P08235 984 aa16.24■□□□□ 0.19
MKS1-211ENST00000581761 CETPP11597 493 aa16.24■□□□□ 0.19
MKS1-211ENST00000581761 EEF1GP26641 437 aaKnown RBP16.24■□□□□ 0.19
MKS1-211ENST00000581761 CCZ1BP86790 482 aa16.24■□□□□ 0.19
MKS1-211ENST00000581761 CCZ1P86791 482 aaPredicted RBP16.24■□□□□ 0.19
MKS1-211ENST00000581761 GIT2Q14161 759 aa16.24■□□□□ 0.19
MKS1-211ENST00000581761 NOLC1Q14978 699 aaKnown RBP eCLIP16.24■□□□□ 0.19
MKS1-211ENST00000581761 LRRC41Q15345 812 aa16.24■□□□□ 0.19
MKS1-211ENST00000581761 HERC4Q5GLZ8 1057 aaPredicted RBP16.24■□□□□ 0.19
MKS1-211ENST00000581761 SPECC1LQ69YQ0 1117 aa16.24■□□□□ 0.19
MKS1-211ENST00000581761 CENPPQ6IPU0 288 aa16.24■□□□□ 0.19
MKS1-211ENST00000581761 MYOCDQ8IZQ8 938 aa16.24■□□□□ 0.19
MKS1-211ENST00000581761 PIGOQ8TEQ8 1089 aa16.24■□□□□ 0.19
MKS1-211ENST00000581761 NACC1Q96RE7 527 aa16.24■□□□□ 0.19
MKS1-211ENST00000581761 VPS16Q9H269 839 aa16.24■□□□□ 0.19
MKS1-211ENST00000581761 TBC1D22BQ9NU19 505 aa16.24■□□□□ 0.19
MKS1-211ENST00000581761 TBC1D7Q9P0N9 293 aa16.24■□□□□ 0.19
MKS1-211ENST00000581761 BTBD7Q9P203 1132 aa16.24■□□□□ 0.19
MKS1-211ENST00000581761 TCEAL9Q9UHQ7 104 aa16.24■□□□□ 0.19
MKS1-211ENST00000581761 AGTPBP1Q9UPW5 1226 aa16.24■□□□□ 0.19
MKS1-211ENST00000581761 A0A0G2JMZ2 1700 aa16.23■□□□□ 0.19
MKS1-211ENST00000581761 TBCAO75347 108 aaKnown RBP16.23■□□□□ 0.19
MKS1-211ENST00000581761 SKILP12757 684 aa16.23■□□□□ 0.19
MKS1-211ENST00000581761 TBX2Q13207 712 aaPredicted RBP16.23■□□□□ 0.19
MKS1-211ENST00000581761 GPAT2Q6NUI2 795 aa16.23■□□□□ 0.19
MKS1-211ENST00000581761 VSIG10LQ86VR7 867 aa16.23■□□□□ 0.19
MKS1-211ENST00000581761 IRF2BP1Q8IU81 584 aa16.23■□□□□ 0.19
MKS1-211ENST00000581761 RIOX2Q8IUF8 465 aa16.23■□□□□ 0.19
MKS1-211ENST00000581761 BANK1Q8NDB2 785 aa16.23■□□□□ 0.19
MKS1-211ENST00000581761 GPRASP2Q96D09 838 aa16.23■□□□□ 0.19
MKS1-211ENST00000581761 REEP2Q9BRK0 252 aa16.23■□□□□ 0.19
MKS1-211ENST00000581761 LXNQ9BS40 222 aa16.23■□□□□ 0.19
MKS1-211ENST00000581761 PAGR1Q9BTK6 254 aa16.23■□□□□ 0.19
MKS1-211ENST00000581761 RUSC1Q9BVN2 902 aa16.23■□□□□ 0.19
MKS1-211ENST00000581761 ASCC2Q9H1I8 757 aaPredicted RBP16.23■□□□□ 0.19
MKS1-211ENST00000581761 FBXO40Q9UH90 709 aa16.23■□□□□ 0.19
MKS1-211ENST00000581761 LRRC10BA6NIK2 292 aa16.22■□□□□ 0.19
MKS1-211ENST00000581761 KIF20AO95235 890 aa16.22■□□□□ 0.19
MKS1-211ENST00000581761 FGFR1OPO95684 399 aaKnown RBP16.22■□□□□ 0.19
MKS1-211ENST00000581761 TPM2P07951 284 aa16.22■□□□□ 0.19
MKS1-211ENST00000581761 OSBPP22059 807 aa16.22■□□□□ 0.19
MKS1-211ENST00000581761 PBX1P40424 430 aa16.22■□□□□ 0.19
MKS1-211ENST00000581761 LRRC63Q05C16 580 aa16.22■□□□□ 0.19
MKS1-211ENST00000581761 RINT1Q6NUQ1 792 aa16.22■□□□□ 0.19
MKS1-211ENST00000581761 FASTKD5Q7L8L6 764 aaKnown RBP16.22■□□□□ 0.19
MKS1-211ENST00000581761 SFR1Q86XK3 245 aa16.22■□□□□ 0.19
MKS1-211ENST00000581761 ANKRD35Q8N283 1001 aa16.22■□□□□ 0.19
MKS1-211ENST00000581761 GLIS3Q8NEA6 775 aa16.22■□□□□ 0.19
MKS1-211ENST00000581761 ABHD8Q96I13 439 aa16.22■□□□□ 0.19
MKS1-211ENST00000581761 CNOT6LQ96LI5 555 aaKnown RBP16.22■□□□□ 0.19
MKS1-211ENST00000581761 SPATC1LQ9H0A9 340 aa16.22■□□□□ 0.19
MKS1-211ENST00000581761 SPTLC3Q9NUV7 552 aa16.22■□□□□ 0.19
MKS1-211ENST00000581761 PCDHA2Q9Y5H9 948 aa16.22■□□□□ 0.19
MKS1-211ENST00000581761 PEX10O60683 326 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms