RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 ATP6V0A1Q93050 837 aa15.65■□□□□ 0.1
CSNK1D-217ENST00000581241 PGBD1Q96JS3 809 aa15.65■□□□□ 0.1
CSNK1D-217ENST00000581241 NR1H3Q13133 447 aa15.64■□□□□ 0.09
CSNK1D-217ENST00000581241 GRAMD4Q6IC98 578 aa15.64■□□□□ 0.09
CSNK1D-217ENST00000581241 NLRP14Q86W24 1093 aa15.64■□□□□ 0.09
CSNK1D-217ENST00000581241 PUS3Q9BZE2 481 aaKnown RBP15.64■□□□□ 0.09
CSNK1D-217ENST00000581241 SYNGAP1Q96PV0 1343 aa15.64■□□□□ 0.09
CSNK1D-217ENST00000581241 GMNCA6NCL1 334 aa15.64■□□□□ 0.09
CSNK1D-217ENST00000581241 PPP2R2AP63151 447 aa15.64■□□□□ 0.09
CSNK1D-217ENST00000581241 SPOUT1Q5T280 376 aaKnown RBP15.64■□□□□ 0.09
CSNK1D-217ENST00000581241 ARL6IP4Q66PJ3 421 aaKnown RBP15.64■□□□□ 0.09
CSNK1D-217ENST00000581241 C4orf50Q6ZRC1 276 aa15.64■□□□□ 0.09
CSNK1D-217ENST00000581241 FBXL13Q8NEE6 735 aa15.64■□□□□ 0.09
CSNK1D-217ENST00000581241 SH3GLB2Q9NR46 395 aa15.64■□□□□ 0.09
CSNK1D-217ENST00000581241 LPXNO60711 386 aa15.64■□□□□ 0.09
CSNK1D-217ENST00000581241 SRGAP2O75044 1071 aa15.64■□□□□ 0.09
CSNK1D-217ENST00000581241 IFNAR1P17181 557 aa15.64■□□□□ 0.09
CSNK1D-217ENST00000581241 BIRC2Q13490 618 aa15.64■□□□□ 0.09
CSNK1D-217ENST00000581241 SLC12A1Q13621 1099 aa15.64■□□□□ 0.09
CSNK1D-217ENST00000581241 GIPC2Q8TF65 315 aa15.64■□□□□ 0.09
CSNK1D-217ENST00000581241 PIGSQ96S52 555 aa15.64■□□□□ 0.09
CSNK1D-217ENST00000581241 SLC5A4Q9NY91 659 aa15.64■□□□□ 0.09
CSNK1D-217ENST00000581241 XPOTO43592 962 aaKnown RBP15.64■□□□□ 0.09
CSNK1D-217ENST00000581241 CAV1Q03135 178 aa15.64■□□□□ 0.09
CSNK1D-217ENST00000581241 ALCAMQ13740 583 aa15.64■□□□□ 0.09
CSNK1D-217ENST00000581241 EPM2AIP1Q7L775 607 aaPredicted RBP15.64■□□□□ 0.09
CSNK1D-217ENST00000581241 SAYSD1Q9NPB0 183 aa15.64■□□□□ 0.09
CSNK1D-217ENST00000581241 FAM8A1Q9UBU6 413 aa15.64■□□□□ 0.09
CSNK1D-217ENST00000581241 TTC37Q6PGP7 1564 aa15.64■□□□□ 0.09
CSNK1D-217ENST00000581241 AATKQ6ZMQ8 1374 aa15.64■□□□□ 0.09
CSNK1D-217ENST00000581241 TCP10L2B9ZVM9 353 aa15.64■□□□□ 0.09
CSNK1D-217ENST00000581241 PRPSAP2O60256 369 aa15.64■□□□□ 0.09
CSNK1D-217ENST00000581241 PMS2P54278 862 aa15.64■□□□□ 0.09
CSNK1D-217ENST00000581241 PRKG1Q13976 671 aa15.64■□□□□ 0.09
CSNK1D-217ENST00000581241 FSCBQ5H9T9 825 aa15.64■□□□□ 0.09
CSNK1D-217ENST00000581241 MEIS1O00470 390 aa15.63■□□□□ 0.09
CSNK1D-217ENST00000581241 CHGBP05060 677 aa15.63■□□□□ 0.09
CSNK1D-217ENST00000581241 BBS9Q3SYG4 887 aa15.63■□□□□ 0.09
CSNK1D-217ENST00000581241 SNX25Q9H3E2 840 aa15.63■□□□□ 0.09
CSNK1D-217ENST00000581241 STK32BQ9NY57 414 aa15.63■□□□□ 0.09
CSNK1D-217ENST00000581241 SPATA31E1Q6ZUB1 1445 aa15.63■□□□□ 0.09
CSNK1D-217ENST00000581241 A0A0G2JND7 137 aa15.63■□□□□ 0.09
CSNK1D-217ENST00000581241 NUDCD1Q96RS6 583 aa15.63■□□□□ 0.09
CSNK1D-217ENST00000581241 FAM96AQ9H5X1 160 aa15.63■□□□□ 0.09
CSNK1D-217ENST00000581241 CAPN11Q9UMQ6 739 aa15.63■□□□□ 0.09
CSNK1D-217ENST00000581241 PLEKHG3A1L390 1219 aa15.63■□□□□ 0.09
CSNK1D-217ENST00000581241 TJP3O95049 919 aa15.63■□□□□ 0.09
CSNK1D-217ENST00000581241 HSPA4LO95757 839 aa15.63■□□□□ 0.09
CSNK1D-217ENST00000581241 TNFAIP1Q13829 316 aa15.63■□□□□ 0.09
CSNK1D-217ENST00000581241 CEP70Q8NHQ1 597 aa15.63■□□□□ 0.09
CSNK1D-217ENST00000581241 LCMT1Q9UIC8 334 aa15.63■□□□□ 0.09
CSNK1D-217ENST00000581241 TMTC4Q5T4D3 741 aa15.63■□□□□ 0.09
CSNK1D-217ENST00000581241 KLC3Q6P597 504 aa15.63■□□□□ 0.09
CSNK1D-217ENST00000581241 C16orf87Q6PH81 154 aa15.63■□□□□ 0.09
CSNK1D-217ENST00000581241 TRMT10CQ7L0Y3 403 aaKnown RBP15.63■□□□□ 0.09
CSNK1D-217ENST00000581241 ZNF233A6NK53 670 aa15.63■□□□□ 0.09
CSNK1D-217ENST00000581241 ZBBXA8MT70 800 aa15.63■□□□□ 0.09
CSNK1D-217ENST00000581241 CCND2P30279 289 aa15.63■□□□□ 0.09
CSNK1D-217ENST00000581241 SCNN1DP51172 638 aa15.63■□□□□ 0.09
CSNK1D-217ENST00000581241 DYDC2Q96IM9 177 aa15.63■□□□□ 0.09
CSNK1D-217ENST00000581241 PARVGQ9HBI0 331 aa15.63■□□□□ 0.09
CSNK1D-217ENST00000581241 COPEO14579 308 aa15.62■□□□□ 0.09
CSNK1D-217ENST00000581241 PPIP5K2O43314 1243 aa15.62■□□□□ 0.09
CSNK1D-217ENST00000581241 KCTD1Q719H9 257 aa15.62■□□□□ 0.09
CSNK1D-217ENST00000581241 POLR3CQ9BUI4 534 aaPredicted RBP15.62■□□□□ 0.09
CSNK1D-217ENST00000581241 CALN1Q9BXU9 219 aa15.62■□□□□ 0.09
CSNK1D-217ENST00000581241 GOLPH3LQ9H4A5 285 aa15.62■□□□□ 0.09
CSNK1D-217ENST00000581241 WDR70Q9NW82 654 aa15.62■□□□□ 0.09
CSNK1D-217ENST00000581241 G3BP2Q9UN86 482 aaKnown RBP15.62■□□□□ 0.09
CSNK1D-217ENST00000581241 MAGED2Q9UNF1 606 aaPredicted RBP15.62■□□□□ 0.09
CSNK1D-217ENST00000581241 ZNF804BA4D1E1 1349 aa15.62■□□□□ 0.09
CSNK1D-217ENST00000581241 RUBCNQ92622 972 aa15.62■□□□□ 0.09
CSNK1D-217ENST00000581241 FAF2Q96CS3 445 aa15.62■□□□□ 0.09
CSNK1D-217ENST00000581241 ZMAT2Q96NC0 199 aaKnown RBP15.62■□□□□ 0.09
CSNK1D-217ENST00000581241 PAGR1Q9BTK6 254 aa15.62■□□□□ 0.09
CSNK1D-217ENST00000581241 YIPF3Q9GZM5 350 aa15.62■□□□□ 0.09
CSNK1D-217ENST00000581241 OSBPL5Q9H0X9 879 aaPredicted RBP15.62■□□□□ 0.09
CSNK1D-217ENST00000581241 CFAP73A6NFT4 308 aa15.62■□□□□ 0.09
CSNK1D-217ENST00000581241 DYNLL1P63167 89 aaKnown RBP15.62■□□□□ 0.09
CSNK1D-217ENST00000581241 NECTIN1Q15223 517 aa15.62■□□□□ 0.09
CSNK1D-217ENST00000581241 RGS9BPQ6ZS82 235 aa15.62■□□□□ 0.09
CSNK1D-217ENST00000581241 GSPT2Q8IYD1 628 aaKnown RBP15.62■□□□□ 0.09
CSNK1D-217ENST00000581241 EXOC8Q8IYI6 725 aa15.62■□□□□ 0.09
CSNK1D-217ENST00000581241 TTC25Q96NG3 672 aa15.62■□□□□ 0.09
CSNK1D-217ENST00000581241 LGALS16A8MUM7 142 aa15.62■□□□□ 0.09
CSNK1D-217ENST00000581241 AP2B1P63010 937 aa15.62■□□□□ 0.09
CSNK1D-217ENST00000581241 CCDC17Q96LX7 622 aa15.62■□□□□ 0.09
CSNK1D-217ENST00000581241 MRPL40Q9NQ50 206 aaKnown RBP15.62■□□□□ 0.09
CSNK1D-217ENST00000581241 TAC1P20366 129 aa15.61■□□□□ 0.09
CSNK1D-217ENST00000581241 MAGOHP61326 146 aaKnown RBP15.61■□□□□ 0.09
CSNK1D-217ENST00000581241 OCA2Q04671 838 aa15.61■□□□□ 0.09
CSNK1D-217ENST00000581241 TRIM67Q6ZTA4 783 aa15.61■□□□□ 0.09
CSNK1D-217ENST00000581241 DHX40Q8IX18 779 aaKnown RBP15.61■□□□□ 0.09
CSNK1D-217ENST00000581241 ARL4CP56559 192 aa15.61■□□□□ 0.09
CSNK1D-217ENST00000581241 ALKBH5Q6P6C2 394 aaKnown RBP15.61■□□□□ 0.09
CSNK1D-217ENST00000581241 PDIK1LQ8N165 341 aa15.61■□□□□ 0.09
CSNK1D-217ENST00000581241 LCORLQ8N3X6 602 aa15.61■□□□□ 0.09
CSNK1D-217ENST00000581241 FAM193BQ96PV7 902 aaPredicted RBP15.61■□□□□ 0.09
CSNK1D-217ENST00000581241 PUS7LQ9H0K6 701 aaKnown RBP15.61■□□□□ 0.09
CSNK1D-217ENST00000581241 DNAJC17Q9NVM6 304 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms