RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 TPH2Q8IWU9 490 aa10.27□□□□□ -0.77
CDK5RAP3-220ENST00000581160 FMR1NBQ8N0W7 255 aaPredicted RBP10.27□□□□□ -0.77
CDK5RAP3-220ENST00000581160 AFAP1L1Q8TED9 768 aa10.27□□□□□ -0.77
CDK5RAP3-220ENST00000581160 SH3TC2Q8TF17 1288 aa10.27□□□□□ -0.77
CDK5RAP3-220ENST00000581160 AFG1LQ8WV93 481 aa10.27□□□□□ -0.77
CDK5RAP3-220ENST00000581160 PANK2Q9BZ23 570 aa10.27□□□□□ -0.77
CDK5RAP3-220ENST00000581160 NT5C3AQ9H0P0 336 aa10.27□□□□□ -0.77
CDK5RAP3-220ENST00000581160 UPF3AQ9H1J1 476 aaKnown RBP10.27□□□□□ -0.77
CDK5RAP3-220ENST00000581160 GOLPH3LQ9H4A5 285 aa10.27□□□□□ -0.77
CDK5RAP3-220ENST00000581160 ZSWIM4Q9H7M6 989 aa10.27□□□□□ -0.77
CDK5RAP3-220ENST00000581160 ZNF302Q9NR11 478 aa10.27□□□□□ -0.77
CDK5RAP3-220ENST00000581160 RGL1Q9NZL6 768 aa10.27□□□□□ -0.77
CDK5RAP3-220ENST00000581160 GABBR1Q9UBS5 961 aa10.27□□□□□ -0.77
CDK5RAP3-220ENST00000581160 DDX20Q9UHI6 824 aaKnown RBP10.27□□□□□ -0.77
CDK5RAP3-220ENST00000581160 USP25Q9UHP3 1055 aa10.27□□□□□ -0.77
CDK5RAP3-220ENST00000581160 MAFBQ9Y5Q3 323 aaPredicted RBP10.27□□□□□ -0.77
CDK5RAP3-220ENST00000581160 KDM3AQ9Y4C1 1321 aa10.27□□□□□ -0.77
CDK5RAP3-220ENST00000581160 A0A087X0B3 334 aa10.26□□□□□ -0.77
CDK5RAP3-220ENST00000581160 CTAGE5O15320 804 aa10.26□□□□□ -0.77
CDK5RAP3-220ENST00000581160 POLR2DO15514 142 aaKnown RBP10.26□□□□□ -0.77
CDK5RAP3-220ENST00000581160 KPNA6O60684 536 aa10.26□□□□□ -0.77
CDK5RAP3-220ENST00000581160 ZNF202O95125 648 aa10.26□□□□□ -0.77
CDK5RAP3-220ENST00000581160 LYPLA2O95372 231 aa10.26□□□□□ -0.77
CDK5RAP3-220ENST00000581160 MBD3O95983 291 aa10.26□□□□□ -0.77
CDK5RAP3-220ENST00000581160 HOXD8P13378 290 aaPredicted RBP10.26□□□□□ -0.77
CDK5RAP3-220ENST00000581160 LIG1P18858 919 aa10.26□□□□□ -0.77
CDK5RAP3-220ENST00000581160 TCF7P36402 384 aaPredicted RBP10.26□□□□□ -0.77
CDK5RAP3-220ENST00000581160 CPT1AP50416 773 aa10.26□□□□□ -0.77
CDK5RAP3-220ENST00000581160 STAT5BP51692 787 aa10.26□□□□□ -0.77
CDK5RAP3-220ENST00000581160 SKOR2Q2VWA4 1001 aaPredicted RBP10.26□□□□□ -0.77
CDK5RAP3-220ENST00000581160 SLC9C1Q4G0N8 1177 aa10.26□□□□□ -0.77
CDK5RAP3-220ENST00000581160 TMEM119Q4V9L6 283 aa10.26□□□□□ -0.77
CDK5RAP3-220ENST00000581160 BRDTQ58F21 947 aaPredicted RBP10.26□□□□□ -0.77
CDK5RAP3-220ENST00000581160 FAM160B1Q5W0V3 765 aa10.26□□□□□ -0.77
CDK5RAP3-220ENST00000581160 C4orf19Q8IY42 314 aa10.26□□□□□ -0.77
CDK5RAP3-220ENST00000581160 IQUBQ8NA54 791 aa10.26□□□□□ -0.77
CDK5RAP3-220ENST00000581160 GPT2Q8TD30 523 aa10.26□□□□□ -0.77
CDK5RAP3-220ENST00000581160 ATP6V0A1Q93050 837 aa10.26□□□□□ -0.77
CDK5RAP3-220ENST00000581160 CDK5RAP3Q96JB5 506 aa10.26□□□□□ -0.77
CDK5RAP3-220ENST00000581160 TIGD1Q96MW7 591 aa10.26□□□□□ -0.77
CDK5RAP3-220ENST00000581160 NACC1Q96RE7 527 aa10.26□□□□□ -0.77
CDK5RAP3-220ENST00000581160 PCYT2Q99447 389 aa10.26□□□□□ -0.77
CDK5RAP3-220ENST00000581160 SMARCAD1Q9H4L7 1026 aa10.26□□□□□ -0.77
CDK5RAP3-220ENST00000581160 SPC25Q9HBM1 224 aa10.26□□□□□ -0.77
CDK5RAP3-220ENST00000581160 KIAA1024Q9UPX6 916 aa10.26□□□□□ -0.77
CDK5RAP3-220ENST00000581160 DNM3Q9UQ16 869 aa10.26□□□□□ -0.77
CDK5RAP3-220ENST00000581160 DOCK5Q9H7D0 1870 aa10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 POTEB3A0JP26 581 aa10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 BACH1O14867 736 aa10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 ZEB2O60315 1214 aa10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 NR1I2O75469 434 aa10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 STBD1O95210 358 aa10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 MMP3P08254 477 aa10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 SLFN14P0C7P3 912 aa10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 ATP4AP20648 1035 aa10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 SLC26A2P50443 739 aa10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 CYP4A11Q02928 519 aa10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 ZRSR1Q15695 479 aaKnown RBP10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 E2F4Q16254 413 aa10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 DGKDQ16760 1214 aa10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 LONRF3Q496Y0 759 aa10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 UTP14CQ5TAP6 766 aaKnown RBP10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 LHX8Q68G74 356 aa10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 POTEBQ6S5H4 581 aa10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 CCDC60Q8IWA6 550 aaPredicted RBP10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 ELOA2Q8IYF1 753 aaPredicted RBP10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 PDILTQ8N807 584 aa10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 BANK1Q8NDB2 785 aa10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 KLHDC9Q8NEP7 349 aa10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 RASSF8Q8NHQ8 419 aa10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 LENG1Q96BZ8 264 aaPredicted RBP10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 DHX58Q96C10 678 aa10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 PLIN2Q99541 437 aa10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 LXNQ9BS40 222 aa10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 CUEDC2Q9H467 287 aa10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 AZI2Q9H6S1 392 aa10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 XPNPEP3Q9NQH7 507 aa10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 NRBP2Q9NSY0 501 aa10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 BLOC1S4Q9NUP1 217 aa10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 DDX19AQ9NUU7 478 aaKnown RBP10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 WRAP73Q9P2S5 460 aaPredicted RBP10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 SERTAD1Q9UHV2 236 aa10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 EMSYQ7Z589 1322 aa10.25□□□□□ -0.77
CDK5RAP3-220ENST00000581160 E9PMD0 336 aa10.24□□□□□ -0.77
CDK5RAP3-220ENST00000581160 ZNF862O60290 1169 aa10.24□□□□□ -0.77
CDK5RAP3-220ENST00000581160 ADAMTS4O75173 837 aa10.24□□□□□ -0.77
CDK5RAP3-220ENST00000581160 EYA4O95677 639 aa10.24□□□□□ -0.77
CDK5RAP3-220ENST00000581160 PGK1P00558 417 aa10.24□□□□□ -0.77
CDK5RAP3-220ENST00000581160 LGALS2P05162 132 aa10.24□□□□□ -0.77
CDK5RAP3-220ENST00000581160 PLCG1P19174 1290 aa10.24□□□□□ -0.77
CDK5RAP3-220ENST00000581160 CST5P28325 142 aaPredicted RBP10.24□□□□□ -0.77
CDK5RAP3-220ENST00000581160 STAT6P42226 847 aa10.24□□□□□ -0.77
CDK5RAP3-220ENST00000581160 PSMC6P62333 389 aa10.24□□□□□ -0.77
CDK5RAP3-220ENST00000581160 FSCN1Q16658 493 aaKnown RBP10.24□□□□□ -0.77
CDK5RAP3-220ENST00000581160 UGCGQ16739 394 aa10.24□□□□□ -0.77
CDK5RAP3-220ENST00000581160 NAALADL2Q58DX5 795 aa10.24□□□□□ -0.77
CDK5RAP3-220ENST00000581160 XKR3Q5GH77 459 aa10.24□□□□□ -0.77
CDK5RAP3-220ENST00000581160 GNASQ5JWF2 1037 aa10.24□□□□□ -0.77
CDK5RAP3-220ENST00000581160 KANK3Q6NY19 840 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms