RNA–Protein interactions for RNA: ENST00000580013.5

TSEN54-207, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 4

Gene TSEN54, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-207ENST00000580013 TTC12Q9H892 705 aaPredicted RBP24.39■■□□□ 1.49
TSEN54-207ENST00000580013 ZNF302Q9NR11 478 aa24.39■■□□□ 1.49
TSEN54-207ENST00000580013 PDLIM7Q9NR12 457 aa24.39■■□□□ 1.49
TSEN54-207ENST00000580013 TRMT13Q9NUP7 481 aaKnown RBP24.39■■□□□ 1.49
TSEN54-207ENST00000580013 ZNF215Q9UL58 517 aaPredicted RBP24.39■■□□□ 1.49
TSEN54-207ENST00000580013 TRIM43BA6NCK2 446 aa24.38■■□□□ 1.49
TSEN54-207ENST00000580013 KIAA0355O15063 1070 aa24.38■■□□□ 1.49
TSEN54-207ENST00000580013 ZNF862O60290 1169 aa24.38■■□□□ 1.49
TSEN54-207ENST00000580013 STBD1O95210 358 aa24.38■■□□□ 1.49
TSEN54-207ENST00000580013 OR52Z1P0C646 297 aa24.38■■□□□ 1.49
TSEN54-207ENST00000580013 SMIM10L2AP0DMW4 78 aa24.38■■□□□ 1.49
TSEN54-207ENST00000580013 SMIM10L2BP0DMW5 78 aa24.38■■□□□ 1.49
TSEN54-207ENST00000580013 TXKP42681 527 aa24.38■■□□□ 1.49
TSEN54-207ENST00000580013 SLC26A2P50443 739 aa24.38■■□□□ 1.49
TSEN54-207ENST00000580013 PKP1Q13835 747 aa24.38■■□□□ 1.49
TSEN54-207ENST00000580013 EPHA7Q15375 998 aa24.38■■□□□ 1.49
TSEN54-207ENST00000580013 C7orf61Q8IZ16 206 aa24.38■■□□□ 1.49
TSEN54-207ENST00000580013 C7orf31Q8N865 590 aa24.38■■□□□ 1.49
TSEN54-207ENST00000580013 TRIM43Q96BQ3 446 aaPredicted RBP24.38■■□□□ 1.49
TSEN54-207ENST00000580013 ZSCAN16Q9H4T2 348 aaPredicted RBP24.38■■□□□ 1.49
TSEN54-207ENST00000580013 TBX21Q9UL17 535 aa24.38■■□□□ 1.49
TSEN54-207ENST00000580013 CHMP2AO43633 222 aa24.37■■□□□ 1.49
TSEN54-207ENST00000580013 ZNF200P98182 395 aaPredicted RBP24.37■■□□□ 1.49
TSEN54-207ENST00000580013 IL17AQ16552 155 aa24.37■■□□□ 1.49
TSEN54-207ENST00000580013 UGCGQ16739 394 aa24.37■■□□□ 1.49
TSEN54-207ENST00000580013 FAM160B1Q5W0V3 765 aa24.37■■□□□ 1.49
TSEN54-207ENST00000580013 GABBR1Q9UBS5 961 aa24.37■■□□□ 1.49
TSEN54-207ENST00000580013 ZDHHC9Q9Y397 364 aa24.37■■□□□ 1.49
TSEN54-207ENST00000580013 NR2E3Q9Y5X4 410 aa24.37■■□□□ 1.49
TSEN54-207ENST00000580013 BACH1O14867 736 aa24.36■■□□□ 1.49
TSEN54-207ENST00000580013 MARCH6O60337 910 aa24.36■■□□□ 1.49
TSEN54-207ENST00000580013 CLTBP09497 229 aa24.36■■□□□ 1.49
TSEN54-207ENST00000580013 ZSCAN22P10073 491 aaPredicted RBP24.36■■□□□ 1.49
TSEN54-207ENST00000580013 MARK3P27448 753 aa24.36■■□□□ 1.49
TSEN54-207ENST00000580013 CHMP4BP1P59074 171 aa24.36■■□□□ 1.49
TSEN54-207ENST00000580013 ATP2C1P98194 919 aaPredicted RBP24.36■■□□□ 1.49
TSEN54-207ENST00000580013 PDXDC2PQ6P474 469 aa24.36■■□□□ 1.49
TSEN54-207ENST00000580013 FAM173BQ6P4H8 233 aa24.36■■□□□ 1.49
TSEN54-207ENST00000580013 HSD17B14Q9BPX1 270 aa24.36■■□□□ 1.49
TSEN54-207ENST00000580013 SETD4Q9NVD3 440 aa24.36■■□□□ 1.49
TSEN54-207ENST00000580013 TCEAL9Q9UHQ7 104 aa24.36■■□□□ 1.49
TSEN54-207ENST00000580013 SAMM50Q9Y512 469 aa24.36■■□□□ 1.49
TSEN54-207ENST00000580013 PDE4DIPQ5VU43 2346 aa24.36■■□□□ 1.49
TSEN54-207ENST00000580013 IGSF9BQ9UPX0 1349 aa24.35■■□□□ 1.49
TSEN54-207ENST00000580013 LAD1O00515 517 aa24.35■■□□□ 1.49
TSEN54-207ENST00000580013 TLR3O15455 904 aaKnown RBP24.35■■□□□ 1.49
TSEN54-207ENST00000580013 ITGB8P26012 769 aa24.35■■□□□ 1.49
TSEN54-207ENST00000580013 PRPHP41219 470 aa24.35■■□□□ 1.49
TSEN54-207ENST00000580013 FAM47CQ5HY64 1035 aa24.35■■□□□ 1.49
TSEN54-207ENST00000580013 MARCH8Q5T0T0 291 aa24.35■■□□□ 1.49
TSEN54-207ENST00000580013 ATP8B4Q8TF62 1192 aa24.35■■□□□ 1.49
TSEN54-207ENST00000580013 NRCAMQ92823 1304 aa24.35■■□□□ 1.49
TSEN54-207ENST00000580013 POTEB3A0JP26 581 aa24.34■■□□□ 1.49
TSEN54-207ENST00000580013 ZBTB42B2RXF5 422 aa24.34■■□□□ 1.49
TSEN54-207ENST00000580013 HBP1O60381 514 aa24.34■■□□□ 1.49
TSEN54-207ENST00000580013 SLITRK3O94933 977 aa24.34■■□□□ 1.49
TSEN54-207ENST00000580013 INSRRP14616 1297 aa24.34■■□□□ 1.49
TSEN54-207ENST00000580013 DDIT3P35638 169 aa24.34■■□□□ 1.49
TSEN54-207ENST00000580013 FXR2P51116 673 aaKnown RBP eCLIP24.34■■□□□ 1.49
TSEN54-207ENST00000580013 PDIA5Q14554 519 aa24.34■■□□□ 1.49
TSEN54-207ENST00000580013 PTGISQ16647 500 aa24.34■■□□□ 1.49
TSEN54-207ENST00000580013 POTEBQ6S5H4 581 aa24.34■■□□□ 1.49
TSEN54-207ENST00000580013 TMEM39AQ9NV64 488 aa24.34■■□□□ 1.49
TSEN54-207ENST00000580013 C17orf102A2RUQ5 167 aa24.33■■□□□ 1.49
TSEN54-207ENST00000580013 MBLAC1A4D2B0 266 aaPredicted RBP24.33■■□□□ 1.49
TSEN54-207ENST00000580013 H0YGN5 161 aa24.33■■□□□ 1.49
TSEN54-207ENST00000580013 BRD1O95696 1058 aa24.33■■□□□ 1.49
TSEN54-207ENST00000580013 P4HBP07237 508 aaKnown RBP24.33■■□□□ 1.49
TSEN54-207ENST00000580013 TECP42680 631 aa24.33■■□□□ 1.49
TSEN54-207ENST00000580013 PTPAQ15257 358 aa24.33■■□□□ 1.49
TSEN54-207ENST00000580013 TRIM71Q2Q1W2 868 aaKnown RBP24.33■■□□□ 1.49
TSEN54-207ENST00000580013 LMBR1Q8WVP7 490 aa24.33■■□□□ 1.49
TSEN54-207ENST00000580013 DHX38Q92620 1227 aaKnown RBP24.33■■□□□ 1.49
TSEN54-207ENST00000580013 RGL1Q9NZL6 768 aa24.33■■□□□ 1.49
TSEN54-207ENST00000580013 WRAP73Q9P2S5 460 aaPredicted RBP24.33■■□□□ 1.49
TSEN54-207ENST00000580013 CLIC4Q9Y696 253 aa24.33■■□□□ 1.49
TSEN54-207ENST00000580013 TREHO43280 583 aa24.32■■□□□ 1.48
TSEN54-207ENST00000580013 CYP2C9P11712 490 aa24.32■■□□□ 1.48
TSEN54-207ENST00000580013 PSMC5P62195 406 aa24.32■■□□□ 1.48
TSEN54-207ENST00000580013 PPFIA1Q13136 1202 aa24.32■■□□□ 1.48
TSEN54-207ENST00000580013 SF3A1Q15459 793 aaKnown RBP24.32■■□□□ 1.48
TSEN54-207ENST00000580013 GRIK4Q16099 956 aa24.32■■□□□ 1.48
TSEN54-207ENST00000580013 NCAPH2Q6IBW4 605 aa24.32■■□□□ 1.48
TSEN54-207ENST00000580013 SERINC5Q86VE9 423 aa24.32■■□□□ 1.48
TSEN54-207ENST00000580013 IGSF22Q8N9C0 903 aa24.32■■□□□ 1.48
TSEN54-207ENST00000580013 BBXQ8WY36 941 aaPredicted RBP24.32■■□□□ 1.48
TSEN54-207ENST00000580013 CEP89Q96ST8 783 aa24.32■■□□□ 1.48
TSEN54-207ENST00000580013 EIF2AK1Q9BQI3 630 aaKnown RBP24.32■■□□□ 1.48
TSEN54-207ENST00000580013 NIFKQ9BYG3 293 aaKnown RBP24.32■■□□□ 1.48
TSEN54-207ENST00000580013 ZMYND8Q9ULU4 1186 aaPredicted RBP24.32■■□□□ 1.48
TSEN54-207ENST00000580013 RRN3P2A6NIE6 340 aa24.31■■□□□ 1.48
TSEN54-207ENST00000580013 F13A1P00488 732 aa24.31■■□□□ 1.48
TSEN54-207ENST00000580013 SPATA31C1P0DKV0 1188 aa24.31■■□□□ 1.48
TSEN54-207ENST00000580013 QARSP47897 775 aaKnown RBP24.31■■□□□ 1.48
TSEN54-207ENST00000580013 PTK7Q13308 1070 aa24.31■■□□□ 1.48
TSEN54-207ENST00000580013 TARBP2Q15633 366 aaKnown RBP24.31■■□□□ 1.48
TSEN54-207ENST00000580013 ZNF484Q5JVG2 852 aa24.31■■□□□ 1.48
TSEN54-207ENST00000580013 ARL6IP4Q66PJ3 421 aaKnown RBP24.31■■□□□ 1.48
TSEN54-207ENST00000580013 BANK1Q8NDB2 785 aa24.31■■□□□ 1.48
TSEN54-207ENST00000580013 TNPO1Q92973 898 aaKnown RBP24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms