RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 DCDC2CA8MYV0 355 aa11.11□□□□□ -0.63
MSI2-209ENST00000579483 DYNC1LI2O43237 492 aaPredicted RBP11.11□□□□□ -0.63
MSI2-209ENST00000579483 STAT5BP51692 787 aa11.11□□□□□ -0.63
MSI2-209ENST00000579483 AP3M2P53677 418 aa11.11□□□□□ -0.63
MSI2-209ENST00000579483 C16orf86Q6ZW13 317 aa11.11□□□□□ -0.63
MSI2-209ENST00000579483 INTS8Q75QN2 995 aaKnown RBP11.11□□□□□ -0.63
MSI2-209ENST00000579483 P2RX5Q93086 422 aa11.11□□□□□ -0.63
MSI2-209ENST00000579483 CCDC68Q9H2F9 335 aa11.11□□□□□ -0.63
MSI2-209ENST00000579483 AAASQ9NRG9 546 aa11.11□□□□□ -0.63
MSI2-209ENST00000579483 SLC26A4O43511 780 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 NDUFB10O96000 172 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 ITKQ08881 620 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 CTTNQ14247 550 aaKnown RBP11.1□□□□□ -0.63
MSI2-209ENST00000579483 HS1BP3Q53T59 392 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 FAM83AQ86UY5 434 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 ZDHHC15Q96MV8 337 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 IFIH1Q9BYX4 1025 aaKnown RBP11.1□□□□□ -0.63
MSI2-209ENST00000579483 MRPL47Q9HD33 250 aaKnown RBP11.1□□□□□ -0.63
MSI2-209ENST00000579483 GABBR1Q9UBS5 961 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 ASAP2O43150 1006 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 PLEKHA8P1O95397 391 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 PEX3P56589 373 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 EPHA7Q15375 998 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 MAP7D1Q3KQU3 841 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 ZNF568Q3ZCX4 644 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 PADI6Q6TGC4 694 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 SMIM5Q71RC9 77 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 PLEKHH3Q7Z736 793 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 PCSK9Q8NBP7 692 aaKnown RBP11.1□□□□□ -0.63
MSI2-209ENST00000579483 TRIM7Q9C029 511 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 EHD2Q9NZN4 543 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 LCMT1Q9UIC8 334 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 COL5A2P05997 1499 aaPredicted RBP11.1□□□□□ -0.63
MSI2-209ENST00000579483 UBE2Q2LH0YL09 131 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 MEIS1O00470 390 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 CXCL11O14625 94 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 LRRC63Q05C16 580 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 ZNF543Q08ER8 600 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 PPFIA1Q13136 1202 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 GEN1Q17RS7 908 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 CEP55Q53EZ4 464 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 SWSAP1Q6NVH7 229 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 TBC1D10CQ8IV04 446 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 ZNF560Q96MR9 790 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 RRAGCQ9HB90 399 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 NXF1Q9UBU9 619 aaKnown RBP11.1□□□□□ -0.63
MSI2-209ENST00000579483 POLIQ9UNA4 740 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 SPDYE16A6NNV3 312 aaPredicted RBP11.1□□□□□ -0.63
MSI2-209ENST00000579483 KPNA6O60684 536 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 SCP2P22307 547 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 SEMA3FQ13275 785 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 LAMC2Q13753 1193 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 SPDYE2Q495Y8 402 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 CAPZA3Q96KX2 299 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 SLC38A10Q9HBR0 1119 aa11.1□□□□□ -0.63
MSI2-209ENST00000579483 MYO1FO00160 1098 aa11.09□□□□□ -0.63
MSI2-209ENST00000579483 SMARCA1P28370 1054 aa11.09□□□□□ -0.63
MSI2-209ENST00000579483 ARL4AP40617 200 aa11.09□□□□□ -0.63
MSI2-209ENST00000579483 CXCL9Q07325 125 aa11.09□□□□□ -0.63
MSI2-209ENST00000579483 MAN2A1Q16706 1144 aa11.09□□□□□ -0.63
MSI2-209ENST00000579483 ZNF658Q5TYW1 1059 aaPredicted RBP11.09□□□□□ -0.63
MSI2-209ENST00000579483 CASC4Q6P4E1 433 aa11.09□□□□□ -0.63
MSI2-209ENST00000579483 ZNF142P52746 1687 aaPredicted RBP11.09□□□□□ -0.63
MSI2-209ENST00000579483 GMNNO75496 209 aa11.09□□□□□ -0.63
MSI2-209ENST00000579483 YY1P25490 414 aa11.09□□□□□ -0.63
MSI2-209ENST00000579483 GBP1P32455 592 aa11.09□□□□□ -0.63
MSI2-209ENST00000579483 XKR3Q5GH77 459 aa11.09□□□□□ -0.63
MSI2-209ENST00000579483 RNF219Q5W0B1 726 aaPredicted RBP11.09□□□□□ -0.63
MSI2-209ENST00000579483 SGMS1Q86VZ5 419 aa11.09□□□□□ -0.63
MSI2-209ENST00000579483 NME8Q8N427 588 aa11.09□□□□□ -0.63
MSI2-209ENST00000579483 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.09□□□□□ -0.63
MSI2-209ENST00000579483 PAIP2Q9BPZ3 127 aaKnown RBP11.09□□□□□ -0.63
MSI2-209ENST00000579483 KIF9Q9HAQ2 790 aa11.09□□□□□ -0.63
MSI2-209ENST00000579483 CACYBPQ9HB71 228 aaKnown RBP11.09□□□□□ -0.63
MSI2-209ENST00000579483 SKIP12755 728 aa11.09□□□□□ -0.63
MSI2-209ENST00000579483 MXD4Q14582 209 aaPredicted RBP11.09□□□□□ -0.63
MSI2-209ENST00000579483 CFAP221Q4G0U5 840 aa11.09□□□□□ -0.63
MSI2-209ENST00000579483 USP17L6PQ6QN14 398 aa11.09□□□□□ -0.63
MSI2-209ENST00000579483 ATP2A3Q93084 1043 aa11.09□□□□□ -0.63
MSI2-209ENST00000579483 ADAMTSL3P82987 1691 aa11.09□□□□□ -0.63
MSI2-209ENST00000579483 SPDYE2BA6NHP3 402 aa11.09□□□□□ -0.63
MSI2-209ENST00000579483 CEP104O60308 925 aa11.09□□□□□ -0.63
MSI2-209ENST00000579483 HEXIM1O94992 359 aaKnown RBP11.09□□□□□ -0.63
MSI2-209ENST00000579483 SUPT20HL2P0C7V6 817 aa11.09□□□□□ -0.63
MSI2-209ENST00000579483 SPDYE6P0CI01 402 aa11.09□□□□□ -0.63
MSI2-209ENST00000579483 RECQLP46063 649 aaPredicted RBP11.09□□□□□ -0.63
MSI2-209ENST00000579483 CCDC105Q8IYK2 499 aa11.09□□□□□ -0.63
MSI2-209ENST00000579483 THNSL1Q8IYQ7 743 aa11.09□□□□□ -0.63
MSI2-209ENST00000579483 KCTD17Q8N5Z5 321 aa11.09□□□□□ -0.63
MSI2-209ENST00000579483 TMEM39BQ9GZU3 492 aa11.09□□□□□ -0.63
MSI2-209ENST00000579483 NKIRAS1Q9NYS0 192 aa11.09□□□□□ -0.63
MSI2-209ENST00000579483 CLIC4Q9Y696 253 aa11.09□□□□□ -0.63
MSI2-209ENST00000579483 NEDD4P46934 1319 aa11.08□□□□□ -0.64
MSI2-209ENST00000579483 GGPS1O95749 300 aa11.08□□□□□ -0.64
MSI2-209ENST00000579483 STAG3L1P0CL83 205 aa11.08□□□□□ -0.64
MSI2-209ENST00000579483 NNMTP40261 264 aa11.08□□□□□ -0.64
MSI2-209ENST00000579483 POLR2FP61218 127 aaKnown RBP11.08□□□□□ -0.64
MSI2-209ENST00000579483 FKBP1AP62942 108 aaKnown RBP11.08□□□□□ -0.64
MSI2-209ENST00000579483 LMNB2Q03252 620 aa11.08□□□□□ -0.64
MSI2-209ENST00000579483 BAATQ14032 418 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms