RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 ATG7O95352 703 aa12.65□□□□□ -0.38
CDK5RAP3-210ENST00000578733 SGPL1O95470 568 aa12.65□□□□□ -0.38
CDK5RAP3-210ENST00000578733 PGK1P00558 417 aa12.65□□□□□ -0.38
CDK5RAP3-210ENST00000578733 P4HBP07237 508 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-210ENST00000578733 MYL3P08590 195 aa12.65□□□□□ -0.38
CDK5RAP3-210ENST00000578733 SUPT20HL2P0C7V6 817 aa12.65□□□□□ -0.38
CDK5RAP3-210ENST00000578733 MUTP22033 750 aa12.65□□□□□ -0.38
CDK5RAP3-210ENST00000578733 UTP14CQ5TAP6 766 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-210ENST00000578733 LHX8Q68G74 356 aa12.65□□□□□ -0.38
CDK5RAP3-210ENST00000578733 ABHD15Q6UXT9 468 aa12.65□□□□□ -0.38
CDK5RAP3-210ENST00000578733 CHRDL2Q6WN34 429 aa12.65□□□□□ -0.38
CDK5RAP3-210ENST00000578733 PLPPR4Q7Z2D5 763 aa12.65□□□□□ -0.38
CDK5RAP3-210ENST00000578733 KCTD17Q8N5Z5 321 aa12.65□□□□□ -0.38
CDK5RAP3-210ENST00000578733 ZNF579Q8NAF0 562 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-210ENST00000578733 ANKLE1Q8NAG6 615 aa12.65□□□□□ -0.38
CDK5RAP3-210ENST00000578733 SNX29Q8TEQ0 813 aa12.65□□□□□ -0.38
CDK5RAP3-210ENST00000578733 U2AF1L4Q8WU68 220 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-210ENST00000578733 GLG1Q92896 1179 aa12.65□□□□□ -0.38
CDK5RAP3-210ENST00000578733 LENG1Q96BZ8 264 aaPredicted RBP12.65□□□□□ -0.38
CDK5RAP3-210ENST00000578733 PYM1Q9BRP8 204 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-210ENST00000578733 TUFT1Q9NNX1 390 aa12.65□□□□□ -0.38
CDK5RAP3-210ENST00000578733 CCDC39Q9UFE4 941 aa12.65□□□□□ -0.38
CDK5RAP3-210ENST00000578733 FBXO2Q9UK22 296 aaPredicted RBP12.65□□□□□ -0.38
CDK5RAP3-210ENST00000578733 OGDHLQ9ULD0 1010 aa12.65□□□□□ -0.38
CDK5RAP3-210ENST00000578733 EVPLQ92817 2033 aa12.65□□□□□ -0.38
CDK5RAP3-210ENST00000578733 CEP290O15078 2479 aa12.64□□□□□ -0.39
CDK5RAP3-210ENST00000578733 TRIP12Q14669 1992 aaPredicted RBP12.64□□□□□ -0.39
CDK5RAP3-210ENST00000578733 GSTTP1A0A1W2PQM5 241 aa12.64□□□□□ -0.39
CDK5RAP3-210ENST00000578733 POTEMA6NI47 508 aa12.64□□□□□ -0.39
CDK5RAP3-210ENST00000578733 DNM1LO00429 736 aa12.64□□□□□ -0.39
CDK5RAP3-210ENST00000578733 CCNE2O96020 404 aa12.64□□□□□ -0.39
CDK5RAP3-210ENST00000578733 HOXD8P13378 290 aaPredicted RBP12.64□□□□□ -0.39
CDK5RAP3-210ENST00000578733 CCT6AP40227 531 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-210ENST00000578733 QARSP47897 775 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-210ENST00000578733 GJA8P48165 433 aa12.64□□□□□ -0.39
CDK5RAP3-210ENST00000578733 STAT5BP51692 787 aa12.64□□□□□ -0.39
CDK5RAP3-210ENST00000578733 PSMC5P62195 406 aa12.64□□□□□ -0.39
CDK5RAP3-210ENST00000578733 BEX3Q00994 111 aa12.64□□□□□ -0.39
CDK5RAP3-210ENST00000578733 SPIRE1Q08AE8 756 aa12.64□□□□□ -0.39
CDK5RAP3-210ENST00000578733 LRRC41Q15345 812 aa12.64□□□□□ -0.39
CDK5RAP3-210ENST00000578733 TMEM63BQ5T3F8 832 aa12.64□□□□□ -0.39
CDK5RAP3-210ENST00000578733 B3GNT9Q6UX72 402 aa12.64□□□□□ -0.39
CDK5RAP3-210ENST00000578733 CKAP2LQ8IYA6 745 aa12.64□□□□□ -0.39
CDK5RAP3-210ENST00000578733 SLC17A8Q8NDX2 589 aa12.64□□□□□ -0.39
CDK5RAP3-210ENST00000578733 KLHDC9Q8NEP7 349 aa12.64□□□□□ -0.39
CDK5RAP3-210ENST00000578733 AFAP1L1Q8TED9 768 aa12.64□□□□□ -0.39
CDK5RAP3-210ENST00000578733 FAM167AQ96KS9 214 aa12.64□□□□□ -0.39
CDK5RAP3-210ENST00000578733 CCDC43Q96MW1 224 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-210ENST00000578733 EIF2AK1Q9BQI3 630 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-210ENST00000578733 MTG1Q9BT17 334 aaPredicted RBP12.64□□□□□ -0.39
CDK5RAP3-210ENST00000578733 POLR3CQ9BUI4 534 aaPredicted RBP12.64□□□□□ -0.39
CDK5RAP3-210ENST00000578733 NT5C3AQ9H0P0 336 aa12.64□□□□□ -0.39
CDK5RAP3-210ENST00000578733 ERAP1Q9NZ08 941 aa12.64□□□□□ -0.39
CDK5RAP3-210ENST00000578733 GABBR1Q9UBS5 961 aa12.64□□□□□ -0.39
CDK5RAP3-210ENST00000578733 LGR5O75473 907 aa12.63□□□□□ -0.39
CDK5RAP3-210ENST00000578733 LGALS2P05162 132 aa12.63□□□□□ -0.39
CDK5RAP3-210ENST00000578733 ASGR1P07306 291 aa12.63□□□□□ -0.39
CDK5RAP3-210ENST00000578733 RPA1P27694 616 aa12.63□□□□□ -0.39
CDK5RAP3-210ENST00000578733 ADALQ6DHV7 355 aa12.63□□□□□ -0.39
CDK5RAP3-210ENST00000578733 SWSAP1Q6NVH7 229 aa12.63□□□□□ -0.39
CDK5RAP3-210ENST00000578733 PDXDC2PQ6P474 469 aa12.63□□□□□ -0.39
CDK5RAP3-210ENST00000578733 OTUD6AQ7L8S5 288 aa12.63□□□□□ -0.39
CDK5RAP3-210ENST00000578733 CABP7Q86V35 215 aa12.63□□□□□ -0.39
CDK5RAP3-210ENST00000578733 GLT1D1Q96MS3 346 aa12.63□□□□□ -0.39
CDK5RAP3-210ENST00000578733 LXNQ9BS40 222 aa12.63□□□□□ -0.39
CDK5RAP3-210ENST00000578733 SEZ6LQ9BYH1 1024 aa12.63□□□□□ -0.39
CDK5RAP3-210ENST00000578733 CRISPLD2Q9H0B8 497 aa12.63□□□□□ -0.39
CDK5RAP3-210ENST00000578733 CSRNP2Q9H175 543 aa12.63□□□□□ -0.39
CDK5RAP3-210ENST00000578733 ZSWIM4Q9H7M6 989 aa12.63□□□□□ -0.39
CDK5RAP3-210ENST00000578733 NRBP2Q9NSY0 501 aa12.63□□□□□ -0.39
CDK5RAP3-210ENST00000578733 PCDHA7Q9UN72 937 aa12.63□□□□□ -0.39
CDK5RAP3-210ENST00000578733 IGSF9BQ9UPX0 1349 aa12.62□□□□□ -0.39
CDK5RAP3-210ENST00000578733 IGKV6D-21A0A0A0MT36 114 aa12.62□□□□□ -0.39
CDK5RAP3-210ENST00000578733 A0A1W2PQ27 194 aa12.62□□□□□ -0.39
CDK5RAP3-210ENST00000578733 A0A1W2PQ64 194 aa12.62□□□□□ -0.39
CDK5RAP3-210ENST00000578733 A0A1W2PQD8 194 aa12.62□□□□□ -0.39
CDK5RAP3-210ENST00000578733 EML1O00423 815 aa12.62□□□□□ -0.39
CDK5RAP3-210ENST00000578733 PTMSP20962 102 aa12.62□□□□□ -0.39
CDK5RAP3-210ENST00000578733 PURAQ00577 322 aaKnown RBP12.62□□□□□ -0.39
CDK5RAP3-210ENST00000578733 ZRSR1Q15695 479 aaKnown RBP12.62□□□□□ -0.39
CDK5RAP3-210ENST00000578733 KCNA10Q16322 511 aa12.62□□□□□ -0.39
CDK5RAP3-210ENST00000578733 IL17AQ16552 155 aa12.62□□□□□ -0.39
CDK5RAP3-210ENST00000578733 CCDC60Q8IWA6 550 aaPredicted RBP12.62□□□□□ -0.39
CDK5RAP3-210ENST00000578733 TPH2Q8IWU9 490 aa12.62□□□□□ -0.39
CDK5RAP3-210ENST00000578733 BANK1Q8NDB2 785 aa12.62□□□□□ -0.39
CDK5RAP3-210ENST00000578733 DPF3Q92784 378 aa12.62□□□□□ -0.39
CDK5RAP3-210ENST00000578733 VTI1AQ96AJ9 217 aa12.62□□□□□ -0.39
CDK5RAP3-210ENST00000578733 CCDC34Q96HJ3 373 aa12.62□□□□□ -0.39
CDK5RAP3-210ENST00000578733 DYDC2Q96IM9 177 aa12.62□□□□□ -0.39
CDK5RAP3-210ENST00000578733 CLIC6Q96NY7 704 aa12.62□□□□□ -0.39
CDK5RAP3-210ENST00000578733 NACC1Q96RE7 527 aa12.62□□□□□ -0.39
CDK5RAP3-210ENST00000578733 HTATIP2Q9BUP3 242 aa12.62□□□□□ -0.39
CDK5RAP3-210ENST00000578733 BCAS3Q9H6U6 928 aa12.62□□□□□ -0.39
CDK5RAP3-210ENST00000578733 GDPD2Q9HCC8 539 aa12.62□□□□□ -0.39
CDK5RAP3-210ENST00000578733 TRPC6Q9Y210 931 aa12.62□□□□□ -0.39
CDK5RAP3-210ENST00000578733 MAFBQ9Y5Q3 323 aaPredicted RBP12.62□□□□□ -0.39
CDK5RAP3-210ENST00000578733 RANBP2P49792 3224 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-210ENST00000578733 A0A1W2PPC1 479 aa12.61□□□□□ -0.39
CDK5RAP3-210ENST00000578733 MYADML2A6NDP7 307 aa12.61□□□□□ -0.39
CDK5RAP3-210ENST00000578733 H3BRB1 525 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms