RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 FLCNQ8NFG4 579 aa8.39□□□□□ -1.07
CDK5RAP3-209ENST00000578663 SYTL5Q8TDW5 730 aaPredicted RBP8.39□□□□□ -1.07
CDK5RAP3-209ENST00000578663 RIN2Q8WYP3 895 aaPredicted RBP8.39□□□□□ -1.07
CDK5RAP3-209ENST00000578663 ATP6V0A1Q93050 837 aa8.39□□□□□ -1.07
CDK5RAP3-209ENST00000578663 CHMP4CQ96CF2 233 aa8.39□□□□□ -1.07
CDK5RAP3-209ENST00000578663 ZNF689Q96CS4 500 aaPredicted RBP8.39□□□□□ -1.07
CDK5RAP3-209ENST00000578663 RMDN3Q96TC7 470 aa8.39□□□□□ -1.07
CDK5RAP3-209ENST00000578663 C16orf70Q9BSU1 422 aa8.39□□□□□ -1.07
CDK5RAP3-209ENST00000578663 ANAPC4Q9UJX5 808 aa8.39□□□□□ -1.07
CDK5RAP3-209ENST00000578663 SORCS3Q9UPU3 1222 aa8.39□□□□□ -1.07
CDK5RAP3-209ENST00000578663 FRMPD2Q68DX3 1309 aaPredicted RBP8.38□□□□□ -1.07
CDK5RAP3-209ENST00000578663 CCDC171Q6TFL3 1326 aa8.38□□□□□ -1.07
CDK5RAP3-209ENST00000578663 CTSHP09668 335 aa8.38□□□□□ -1.07
CDK5RAP3-209ENST00000578663 TGFB3P10600 412 aa8.38□□□□□ -1.07
CDK5RAP3-209ENST00000578663 GHRHRQ02643 423 aa8.38□□□□□ -1.07
CDK5RAP3-209ENST00000578663 BTG3Q14201 252 aaPredicted RBP8.38□□□□□ -1.07
CDK5RAP3-209ENST00000578663 HSDL1Q3SXM5 330 aa8.38□□□□□ -1.07
CDK5RAP3-209ENST00000578663 CELF3Q5SZQ8 465 aaKnown RBP8.38□□□□□ -1.07
CDK5RAP3-209ENST00000578663 GPATCH4Q5T3I0 446 aaKnown RBP8.38□□□□□ -1.07
CDK5RAP3-209ENST00000578663 MYSM1Q5VVJ2 828 aa8.38□□□□□ -1.07
CDK5RAP3-209ENST00000578663 UNQ6494/PRO21346Q6UXR6 183 aa8.38□□□□□ -1.07
CDK5RAP3-209ENST00000578663 MCF2L2Q86YR7 1114 aa8.38□□□□□ -1.07
CDK5RAP3-209ENST00000578663 CMTR2Q8IYT2 770 aaKnown RBP8.38□□□□□ -1.07
CDK5RAP3-209ENST00000578663 GPR161Q8N6U8 529 aaKnown RBP8.38□□□□□ -1.07
CDK5RAP3-209ENST00000578663 ADAM32Q8TC27 787 aa8.38□□□□□ -1.07
CDK5RAP3-209ENST00000578663 SPPL3Q8TCT6 385 aa8.38□□□□□ -1.07
CDK5RAP3-209ENST00000578663 GPATCH3Q96I76 525 aa8.38□□□□□ -1.07
CDK5RAP3-209ENST00000578663 CDCA3Q99618 268 aaPredicted RBP8.38□□□□□ -1.07
CDK5RAP3-209ENST00000578663 TMEM47Q9BQJ4 181 aa8.38□□□□□ -1.07
CDK5RAP3-209ENST00000578663 TMEM121BQ9BXQ6 578 aaPredicted RBP8.38□□□□□ -1.07
CDK5RAP3-209ENST00000578663 LRRCC1Q9C099 1032 aa8.38□□□□□ -1.07
CDK5RAP3-209ENST00000578663 MFSD1Q9H3U5 465 aa8.38□□□□□ -1.07
CDK5RAP3-209ENST00000578663 GPCPD1Q9NPB8 672 aa8.38□□□□□ -1.07
CDK5RAP3-209ENST00000578663 TCP11L1Q9NUJ3 509 aa8.38□□□□□ -1.07
CDK5RAP3-209ENST00000578663 COL20A1Q9P218 1284 aa8.38□□□□□ -1.07
CDK5RAP3-209ENST00000578663 MTMR7Q9Y216 660 aa8.38□□□□□ -1.07
CDK5RAP3-209ENST00000578663 MYH7BA7E2Y1 1941 aa8.38□□□□□ -1.07
CDK5RAP3-209ENST00000578663 H3BRB1 525 aa8.37□□□□□ -1.07
CDK5RAP3-209ENST00000578663 SLC30A4O14863 429 aa8.37□□□□□ -1.07
CDK5RAP3-209ENST00000578663 TREHO43280 583 aa8.37□□□□□ -1.07
CDK5RAP3-209ENST00000578663 RANBP6O60518 1105 aaKnown RBP8.37□□□□□ -1.07
CDK5RAP3-209ENST00000578663 DGKIO75912 1065 aa8.37□□□□□ -1.07
CDK5RAP3-209ENST00000578663 ITGB1P05556 798 aa8.37□□□□□ -1.07
CDK5RAP3-209ENST00000578663 NR3C2P08235 984 aa8.37□□□□□ -1.07
CDK5RAP3-209ENST00000578663 SMIM10L2AP0DMW4 78 aa8.37□□□□□ -1.07
CDK5RAP3-209ENST00000578663 SMIM10L2BP0DMW5 78 aa8.37□□□□□ -1.07
CDK5RAP3-209ENST00000578663 NRIP1P48552 1158 aa8.37□□□□□ -1.07
CDK5RAP3-209ENST00000578663 UBE3AQ05086 875 aa8.37□□□□□ -1.07
CDK5RAP3-209ENST00000578663 VARS2Q5ST30 1063 aaKnown RBP8.37□□□□□ -1.07
CDK5RAP3-209ENST00000578663 N4BP2L1Q5TBK1 243 aaPredicted RBP8.37□□□□□ -1.07
CDK5RAP3-209ENST00000578663 ADGRD2Q7Z7M1 963 aa8.37□□□□□ -1.07
CDK5RAP3-209ENST00000578663 ATP8B4Q8TF62 1192 aa8.37□□□□□ -1.07
CDK5RAP3-209ENST00000578663 SPATA33Q96N06 139 aa8.37□□□□□ -1.07
CDK5RAP3-209ENST00000578663 TAAR1Q96RJ0 339 aa8.37□□□□□ -1.07
CDK5RAP3-209ENST00000578663 TUT1Q9H6E5 874 aaKnown RBP8.37□□□□□ -1.07
CDK5RAP3-209ENST00000578663 EHMT1Q9H9B1 1298 aa8.37□□□□□ -1.07
CDK5RAP3-209ENST00000578663 PARD6AQ9NPB6 346 aa8.37□□□□□ -1.07
CDK5RAP3-209ENST00000578663 PXMP2Q9NR77 195 aa8.37□□□□□ -1.07
CDK5RAP3-209ENST00000578663 BARX2Q9UMQ3 279 aaPredicted RBP8.37□□□□□ -1.07
CDK5RAP3-209ENST00000578663 KALRNO60229 2985 aa8.37□□□□□ -1.07
CDK5RAP3-209ENST00000578663 SPTA1P02549 2419 aa8.37□□□□□ -1.07
CDK5RAP3-209ENST00000578663 CFAP46Q8IYW2 2715 aa8.36□□□□□ -1.07
CDK5RAP3-209ENST00000578663 FOXP2O15409 715 aa8.36□□□□□ -1.07
CDK5RAP3-209ENST00000578663 GGPS1O95749 300 aa8.36□□□□□ -1.07
CDK5RAP3-209ENST00000578663 LGALS2P05162 132 aa8.36□□□□□ -1.07
CDK5RAP3-209ENST00000578663 SP9P0CG40 484 aa8.36□□□□□ -1.07
CDK5RAP3-209ENST00000578663 SRGAP2BP0DMP2 458 aa8.36□□□□□ -1.07
CDK5RAP3-209ENST00000578663 HSPD1P10809 573 aaKnown RBP8.36□□□□□ -1.07
CDK5RAP3-209ENST00000578663 EIF2AK2P19525 551 aaKnown RBP8.36□□□□□ -1.07
CDK5RAP3-209ENST00000578663 UBA1P22314 1058 aaKnown RBP8.36□□□□□ -1.07
CDK5RAP3-209ENST00000578663 SP100P23497 879 aaPredicted RBP8.36□□□□□ -1.07
CDK5RAP3-209ENST00000578663 DNAJB1P25685 340 aa8.36□□□□□ -1.07
CDK5RAP3-209ENST00000578663 ADAM17P78536 824 aa8.36□□□□□ -1.07
CDK5RAP3-209ENST00000578663 AAMPQ13685 434 aa8.36□□□□□ -1.07
CDK5RAP3-209ENST00000578663 USH1GQ495M9 461 aa8.36□□□□□ -1.07
CDK5RAP3-209ENST00000578663 ZMYM1Q5SVZ6 1142 aa8.36□□□□□ -1.07
CDK5RAP3-209ENST00000578663 ARHGEF16Q5VV41 709 aa8.36□□□□□ -1.07
CDK5RAP3-209ENST00000578663 PDE12Q6L8Q7 609 aaKnown RBP8.36□□□□□ -1.07
CDK5RAP3-209ENST00000578663 TAF2Q6P1X5 1199 aa8.36□□□□□ -1.07
CDK5RAP3-209ENST00000578663 TMEM184AQ6ZMB5 413 aa8.36□□□□□ -1.07
CDK5RAP3-209ENST00000578663 FAM43BQ6ZT52 329 aaPredicted RBP8.36□□□□□ -1.07
CDK5RAP3-209ENST00000578663 RASGRP4Q8TDF6 673 aa8.36□□□□□ -1.07
CDK5RAP3-209ENST00000578663 POF1BQ8WVV4 589 aa8.36□□□□□ -1.07
CDK5RAP3-209ENST00000578663 TTC14Q96N46 770 aa8.36□□□□□ -1.07
CDK5RAP3-209ENST00000578663 NEK1Q96PY6 1258 aa8.36□□□□□ -1.07
CDK5RAP3-209ENST00000578663 OSBPL7Q9BZF2 842 aa8.36□□□□□ -1.07
CDK5RAP3-209ENST00000578663 RNPEPQ9H4A4 650 aa8.36□□□□□ -1.07
CDK5RAP3-209ENST00000578663 MAP3K20Q9NYL2 800 aaKnown RBP8.36□□□□□ -1.07
CDK5RAP3-209ENST00000578663 NCDNQ9UBB6 729 aa8.36□□□□□ -1.07
CDK5RAP3-209ENST00000578663 MRPL11Q9Y3B7 192 aaKnown RBP8.36□□□□□ -1.07
CDK5RAP3-209ENST00000578663 MRPL42Q9Y6G3 142 aaKnown RBP8.36□□□□□ -1.07
CDK5RAP3-209ENST00000578663 MIA3Q5JRA6 1907 aa8.36□□□□□ -1.07
CDK5RAP3-209ENST00000578663 IGHDP01880 384 aa8.35□□□□□ -1.07
CDK5RAP3-209ENST00000578663 RPLP2P05387 115 aaKnown RBP8.35□□□□□ -1.07
CDK5RAP3-209ENST00000578663 GHRP10912 638 aa8.35□□□□□ -1.07
CDK5RAP3-209ENST00000578663 PCP11498 1178 aaKnown RBP8.35□□□□□ -1.07
CDK5RAP3-209ENST00000578663 HOXB8P17481 243 aaPredicted RBP8.35□□□□□ -1.07
CDK5RAP3-209ENST00000578663 NT5C2P49902 561 aa8.35□□□□□ -1.07
CDK5RAP3-209ENST00000578663 HSD17B4P51659 736 aa8.35□□□□□ -1.07
CDK5RAP3-209ENST00000578663 CTDSPL2Q05D32 466 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms