RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 PPFIA1Q13136 1202 aa22.41■■□□□ 1.18
SCARF1-208ENST00000574545 NPY5RQ15761 445 aa22.41■■□□□ 1.18
SCARF1-208ENST00000574545 ABHD15Q6UXT9 468 aa22.41■■□□□ 1.18
SCARF1-208ENST00000574545 TRIM22Q8IYM9 498 aa22.41■■□□□ 1.18
SCARF1-208ENST00000574545 TPCN1Q9ULQ1 816 aa22.41■■□□□ 1.18
SCARF1-208ENST00000574545 M0R2N6 131 aa22.4■■□□□ 1.18
SCARF1-208ENST00000574545 CPLX1O14810 134 aa22.4■■□□□ 1.18
SCARF1-208ENST00000574545 SEC24BO95487 1268 aa22.4■■□□□ 1.18
SCARF1-208ENST00000574545 PLCB4Q15147 1175 aa22.4■■□□□ 1.18
SCARF1-208ENST00000574545 GRIK4Q16099 956 aa22.4■■□□□ 1.18
SCARF1-208ENST00000574545 PLEKHG4Q58EX7 1191 aa22.4■■□□□ 1.18
SCARF1-208ENST00000574545 RUFY4Q6ZNE9 571 aa22.4■■□□□ 1.18
SCARF1-208ENST00000574545 DBF4BQ8NFT6 615 aa22.4■■□□□ 1.18
SCARF1-208ENST00000574545 LENG9Q96B70 501 aa22.4■■□□□ 1.18
SCARF1-208ENST00000574545 PRDM12Q9H4Q4 367 aa22.4■■□□□ 1.18
SCARF1-208ENST00000574545 IPO5O00410 1097 aaKnown RBP22.39■■□□□ 1.17
SCARF1-208ENST00000574545 PFKFB2O60825 505 aa22.39■■□□□ 1.17
SCARF1-208ENST00000574545 INSRRP14616 1297 aa22.39■■□□□ 1.17
SCARF1-208ENST00000574545 STAT5BP51692 787 aa22.39■■□□□ 1.17
SCARF1-208ENST00000574545 NLRP5P59047 1200 aa22.39■■□□□ 1.17
SCARF1-208ENST00000574545 DEFB103AP81534 67 aa22.39■■□□□ 1.17
SCARF1-208ENST00000574545 MAFAQ8NHW3 353 aaPredicted RBP22.39■■□□□ 1.17
SCARF1-208ENST00000574545 AIFM3Q96NN9 605 aa22.39■■□□□ 1.17
SCARF1-208ENST00000574545 PCDHA4Q9UN74 947 aa22.39■■□□□ 1.17
SCARF1-208ENST00000574545 RRN3P2A6NIE6 340 aa22.38■■□□□ 1.17
SCARF1-208ENST00000574545 EFCAB14O75071 495 aa22.38■■□□□ 1.17
SCARF1-208ENST00000574545 ARHGEF15O94989 841 aa22.38■■□□□ 1.17
SCARF1-208ENST00000574545 CA3P07451 260 aa22.38■■□□□ 1.17
SCARF1-208ENST00000574545 CTSHP09668 335 aa22.38■■□□□ 1.17
SCARF1-208ENST00000574545 KCNJ6P48051 423 aa22.38■■□□□ 1.17
SCARF1-208ENST00000574545 AK2P54819 239 aa22.38■■□□□ 1.17
SCARF1-208ENST00000574545 SETQ01105 290 aaPredicted RBP22.38■■□□□ 1.17
SCARF1-208ENST00000574545 IKBKEQ14164 716 aa22.38■■□□□ 1.17
SCARF1-208ENST00000574545 ADGRE1Q14246 886 aa22.38■■□□□ 1.17
SCARF1-208ENST00000574545 TAF2Q6P1X5 1199 aa22.38■■□□□ 1.17
SCARF1-208ENST00000574545 CPLX2Q6PUV4 134 aaKnown RBP22.38■■□□□ 1.17
SCARF1-208ENST00000574545 FAM177A1Q8N128 213 aaPredicted RBP22.38■■□□□ 1.17
SCARF1-208ENST00000574545 AZI2Q9H6S1 392 aa22.38■■□□□ 1.17
SCARF1-208ENST00000574545 TBC1D22BQ9NU19 505 aa22.38■■□□□ 1.17
SCARF1-208ENST00000574545 DDX39AO00148 427 aaKnown RBP22.37■■□□□ 1.17
SCARF1-208ENST00000574545 CHRNA1P02708 482 aa22.37■■□□□ 1.17
SCARF1-208ENST00000574545 USP11P51784 963 aa22.37■■□□□ 1.17
SCARF1-208ENST00000574545 MGAT3Q09327 533 aa22.37■■□□□ 1.17
SCARF1-208ENST00000574545 PPP2R2DQ66LE6 453 aa22.37■■□□□ 1.17
SCARF1-208ENST00000574545 TMCO2Q7Z6W1 182 aaPredicted RBP22.37■■□□□ 1.17
SCARF1-208ENST00000574545 DAGLBQ8NCG7 672 aa22.37■■□□□ 1.17
SCARF1-208ENST00000574545 ZNF577Q9BSK1 485 aa22.37■■□□□ 1.17
SCARF1-208ENST00000574545 TUBE1Q9UJT0 475 aa22.37■■□□□ 1.17
SCARF1-208ENST00000574545 GJB5O95377 273 aa22.36■■□□□ 1.17
SCARF1-208ENST00000574545 CTDNEP1O95476 244 aa22.36■■□□□ 1.17
SCARF1-208ENST00000574545 ATP4AP20648 1035 aa22.36■■□□□ 1.17
SCARF1-208ENST00000574545 SLC26A2P50443 739 aa22.36■■□□□ 1.17
SCARF1-208ENST00000574545 PRR16Q569H4 304 aa22.36■■□□□ 1.17
SCARF1-208ENST00000574545 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.36■■□□□ 1.17
SCARF1-208ENST00000574545 CCDC60Q8IWA6 550 aaPredicted RBP22.36■■□□□ 1.17
SCARF1-208ENST00000574545 ZBTB10Q96DT7 871 aa22.36■■□□□ 1.17
SCARF1-208ENST00000574545 UIMC1Q96RL1 719 aa22.36■■□□□ 1.17
SCARF1-208ENST00000574545 SLKQ9H2G2 1235 aaPredicted RBP22.36■■□□□ 1.17
SCARF1-208ENST00000574545 VCANP13611 3396 aa22.36■■□□□ 1.17
SCARF1-208ENST00000574545 KIF28PB7ZC32 967 aa22.35■■□□□ 1.17
SCARF1-208ENST00000574545 TAP1Q03518 808 aa22.35■■□□□ 1.17
SCARF1-208ENST00000574545 ANKRD1Q15327 319 aa22.35■■□□□ 1.17
SCARF1-208ENST00000574545 BLIDQ8IZY5 108 aa22.35■■□□□ 1.17
SCARF1-208ENST00000574545 TBCKQ8TEA7 893 aa22.35■■□□□ 1.17
SCARF1-208ENST00000574545 DNAJB3Q8WWF6 145 aa22.35■■□□□ 1.17
SCARF1-208ENST00000574545 STK36Q9NRP7 1315 aa22.34■■□□□ 1.17
SCARF1-208ENST00000574545 POTEB3A0JP26 581 aa22.34■■□□□ 1.17
SCARF1-208ENST00000574545 EIF5BO60841 1220 aaKnown RBP22.34■■□□□ 1.17
SCARF1-208ENST00000574545 IGBP1P78318 339 aa22.34■■□□□ 1.17
SCARF1-208ENST00000574545 GALNT17Q6IS24 598 aa22.34■■□□□ 1.17
SCARF1-208ENST00000574545 ZNF746Q6NUN9 644 aaPredicted RBP22.34■■□□□ 1.17
SCARF1-208ENST00000574545 POTEBQ6S5H4 581 aa22.34■■□□□ 1.17
SCARF1-208ENST00000574545 TRAPPC12Q8WVT3 735 aa22.34■■□□□ 1.17
SCARF1-208ENST00000574545 TNPO1Q92973 898 aaKnown RBP22.34■■□□□ 1.17
SCARF1-208ENST00000574545 GAS2L1Q99501 681 aaPredicted RBP22.34■■□□□ 1.17
SCARF1-208ENST00000574545 C22orf23Q9BZE7 217 aa22.34■■□□□ 1.17
SCARF1-208ENST00000574545 TRPC6Q9Y210 931 aa22.34■■□□□ 1.17
SCARF1-208ENST00000574545 MAFBQ9Y5Q3 323 aaPredicted RBP22.34■■□□□ 1.17
SCARF1-208ENST00000574545 MICAL3Q7RTP6 2002 aa22.34■■□□□ 1.17
SCARF1-208ENST00000574545 CYP3A7-CYP3A51PA0A087WV96 503 aa22.33■■□□□ 1.17
SCARF1-208ENST00000574545 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.33■■□□□ 1.17
SCARF1-208ENST00000574545 LCHNA4D1U4 455 aa22.33■■□□□ 1.17
SCARF1-208ENST00000574545 MSH4O15457 936 aa22.33■■□□□ 1.17
SCARF1-208ENST00000574545 TLL1O43897 1013 aa22.33■■□□□ 1.17
SCARF1-208ENST00000574545 DTNBO60941 627 aa22.33■■□□□ 1.17
SCARF1-208ENST00000574545 CDKL5O76039 1030 aa22.33■■□□□ 1.17
SCARF1-208ENST00000574545 CYP3A7P24462 503 aa22.33■■□□□ 1.17
SCARF1-208ENST00000574545 ME3Q16798 604 aa22.33■■□□□ 1.17
SCARF1-208ENST00000574545 SWSAP1Q6NVH7 229 aa22.33■■□□□ 1.17
SCARF1-208ENST00000574545 MIS18BP1Q6P0N0 1132 aa22.33■■□□□ 1.17
SCARF1-208ENST00000574545 USP38Q8NB14 1042 aa22.33■■□□□ 1.17
SCARF1-208ENST00000574545 ATP8B4Q8TF62 1192 aa22.33■■□□□ 1.17
SCARF1-208ENST00000574545 SEPT8Q92599 483 aa22.33■■□□□ 1.17
SCARF1-208ENST00000574545 MBOAT7Q96N66 472 aa22.33■■□□□ 1.17
SCARF1-208ENST00000574545 RAD9AQ99638 391 aa22.33■■□□□ 1.17
SCARF1-208ENST00000574545 PHF20Q9BVI0 1012 aa22.33■■□□□ 1.17
SCARF1-208ENST00000574545 ZNF302Q9NR11 478 aa22.33■■□□□ 1.17
SCARF1-208ENST00000574545 PCDHA2Q9Y5H9 948 aa22.33■■□□□ 1.17
SCARF1-208ENST00000574545 HBP1O60381 514 aa22.32■■□□□ 1.16
SCARF1-208ENST00000574545 LARGE1O95461 756 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms