RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 IGFBP4P22692 258 aa29.65■■■□□ 2.34
NPLOC4-215ENST00000574095 SSRP1Q08945 709 aaKnown RBP29.65■■■□□ 2.34
NPLOC4-215ENST00000574095 CCDC148Q8NFR7 591 aa29.65■■■□□ 2.34
NPLOC4-215ENST00000574095 CERS4Q9HA82 394 aa29.65■■■□□ 2.34
NPLOC4-215ENST00000574095 ARHGEF15O94989 841 aa29.64■■■□□ 2.34
NPLOC4-215ENST00000574095 IGBP1P78318 339 aa29.64■■■□□ 2.34
NPLOC4-215ENST00000574095 PLEKHG4Q58EX7 1191 aa29.64■■■□□ 2.34
NPLOC4-215ENST00000574095 LIN28BQ6ZN17 250 aaKnown RBP eCLIP29.64■■■□□ 2.34
NPLOC4-215ENST00000574095 TRIM22Q8IYM9 498 aa29.64■■■□□ 2.34
NPLOC4-215ENST00000574095 USP38Q8NB14 1042 aa29.64■■■□□ 2.34
NPLOC4-215ENST00000574095 BICD2Q8TD16 824 aa29.64■■■□□ 2.34
NPLOC4-215ENST00000574095 PPM1EQ8WY54 764 aa29.64■■■□□ 2.34
NPLOC4-215ENST00000574095 ZBED2Q9BTP6 218 aa29.64■■■□□ 2.34
NPLOC4-215ENST00000574095 CPLX1O14810 134 aa29.63■■■□□ 2.33
NPLOC4-215ENST00000574095 EFCAB14O75071 495 aa29.63■■■□□ 2.33
NPLOC4-215ENST00000574095 INSRRP14616 1297 aa29.63■■■□□ 2.33
NPLOC4-215ENST00000574095 MARCH8Q5T0T0 291 aa29.63■■■□□ 2.33
NPLOC4-215ENST00000574095 TUBE1Q9UJT0 475 aa29.63■■■□□ 2.33
NPLOC4-215ENST00000574095 MICAL3Q7RTP6 2002 aa29.62■■■□□ 2.33
NPLOC4-215ENST00000574095 DLL1O00548 723 aa29.62■■■□□ 2.33
NPLOC4-215ENST00000574095 ATG7O95352 703 aa29.62■■■□□ 2.33
NPLOC4-215ENST00000574095 CCNE2O96020 404 aa29.62■■■□□ 2.33
NPLOC4-215ENST00000574095 STAT5BP51692 787 aa29.62■■■□□ 2.33
NPLOC4-215ENST00000574095 NLRP5P59047 1200 aa29.62■■■□□ 2.33
NPLOC4-215ENST00000574095 TAP1Q03518 808 aa29.62■■■□□ 2.33
NPLOC4-215ENST00000574095 FAM26DQ5JW98 314 aa29.62■■■□□ 2.33
NPLOC4-215ENST00000574095 PLPPR4Q7Z2D5 763 aa29.62■■■□□ 2.33
NPLOC4-215ENST00000574095 ZBTB10Q96DT7 871 aa29.62■■■□□ 2.33
NPLOC4-215ENST00000574095 SH3GLB2Q9NR46 395 aa29.62■■■□□ 2.33
NPLOC4-215ENST00000574095 TRPC6Q9Y210 931 aa29.62■■■□□ 2.33
NPLOC4-215ENST00000574095 LCHNA4D1U4 455 aa29.61■■■□□ 2.33
NPLOC4-215ENST00000574095 RFXAPO00287 272 aa29.61■■■□□ 2.33
NPLOC4-215ENST00000574095 DHX15O43143 795 aaKnown RBP29.61■■■□□ 2.33
NPLOC4-215ENST00000574095 PLCB4Q15147 1175 aa29.61■■■□□ 2.33
NPLOC4-215ENST00000574095 FAM117BQ6P1L5 589 aa29.61■■■□□ 2.33
NPLOC4-215ENST00000574095 TAF2Q6P1X5 1199 aa29.61■■■□□ 2.33
NPLOC4-215ENST00000574095 DNAJB3Q8WWF6 145 aa29.61■■■□□ 2.33
NPLOC4-215ENST00000574095 SEPT8Q92599 483 aa29.61■■■□□ 2.33
NPLOC4-215ENST00000574095 ZNF577Q9BSK1 485 aa29.61■■■□□ 2.33
NPLOC4-215ENST00000574095 MBLAC1A4D2B0 266 aaPredicted RBP29.6■■■□□ 2.33
NPLOC4-215ENST00000574095 IPO5O00410 1097 aaKnown RBP29.6■■■□□ 2.33
NPLOC4-215ENST00000574095 GJB5O95377 273 aa29.6■■■□□ 2.33
NPLOC4-215ENST00000574095 CHRNA1P02708 482 aa29.6■■■□□ 2.33
NPLOC4-215ENST00000574095 RRN3P2A6NIE6 340 aa29.59■■■□□ 2.33
NPLOC4-215ENST00000574095 DEXIO95424 95 aa29.59■■■□□ 2.33
NPLOC4-215ENST00000574095 MKRN4PQ13434 485 aaPredicted RBP29.59■■■□□ 2.33
NPLOC4-215ENST00000574095 CCDC85BQ15834 202 aaPredicted RBP29.59■■■□□ 2.33
NPLOC4-215ENST00000574095 PRR16Q569H4 304 aa29.59■■■□□ 2.33
NPLOC4-215ENST00000574095 CPLX2Q6PUV4 134 aaKnown RBP29.59■■■□□ 2.33
NPLOC4-215ENST00000574095 ABHD15Q6UXT9 468 aa29.59■■■□□ 2.33
NPLOC4-215ENST00000574095 RPAINQ86UA6 219 aa29.59■■■□□ 2.33
NPLOC4-215ENST00000574095 TRAPPC12Q8WVT3 735 aa29.59■■■□□ 2.33
NPLOC4-215ENST00000574095 AIFM3Q96NN9 605 aa29.59■■■□□ 2.33
NPLOC4-215ENST00000574095 IGKV6D-21A0A0A0MT36 114 aa29.58■■■□□ 2.33
NPLOC4-215ENST00000574095 BACH1O14867 736 aa29.58■■■□□ 2.33
NPLOC4-215ENST00000574095 EDIL3O43854 480 aa29.58■■■□□ 2.33
NPLOC4-215ENST00000574095 SIP14410 1827 aa29.58■■■□□ 2.33
NPLOC4-215ENST00000574095 CIITAP33076 1130 aa29.58■■■□□ 2.33
NPLOC4-215ENST00000574095 SETQ01105 290 aaPredicted RBP29.58■■■□□ 2.33
NPLOC4-215ENST00000574095 SPRED2Q7Z698 418 aa29.58■■■□□ 2.33
NPLOC4-215ENST00000574095 RSPH3Q86UC2 560 aa29.58■■■□□ 2.33
NPLOC4-215ENST00000574095 MYOCDQ8IZQ8 938 aa29.58■■■□□ 2.33
NPLOC4-215ENST00000574095 ARNTL2Q8WYA1 636 aa29.58■■■□□ 2.33
NPLOC4-215ENST00000574095 TNPO1Q92973 898 aaKnown RBP29.58■■■□□ 2.33
NPLOC4-215ENST00000574095 RAD9AQ99638 391 aa29.58■■■□□ 2.33
NPLOC4-215ENST00000574095 POTEB3A0JP26 581 aa29.57■■■□□ 2.32
NPLOC4-215ENST00000574095 EPOPA6NHQ4 379 aa29.57■■■□□ 2.32
NPLOC4-215ENST00000574095 AMHP03971 560 aa29.57■■■□□ 2.32
NPLOC4-215ENST00000574095 ANAPC15P60006 121 aa29.57■■■□□ 2.32
NPLOC4-215ENST00000574095 MGAT3Q09327 533 aa29.57■■■□□ 2.32
NPLOC4-215ENST00000574095 SCRN1Q12765 414 aa29.57■■■□□ 2.32
NPLOC4-215ENST00000574095 POTEBQ6S5H4 581 aa29.57■■■□□ 2.32
NPLOC4-215ENST00000574095 FAM49AQ9H0Q0 323 aaPredicted RBP29.57■■■□□ 2.32
NPLOC4-215ENST00000574095 TBC1D22BQ9NU19 505 aa29.57■■■□□ 2.32
NPLOC4-215ENST00000574095 TPCN1Q9ULQ1 816 aa29.57■■■□□ 2.32
NPLOC4-215ENST00000574095 PCDHA4Q9UN74 947 aa29.57■■■□□ 2.32
NPLOC4-215ENST00000574095 FAM160B1Q5W0V3 765 aa29.56■■■□□ 2.32
NPLOC4-215ENST00000574095 SWSAP1Q6NVH7 229 aa29.56■■■□□ 2.32
NPLOC4-215ENST00000574095 CCDC60Q8IWA6 550 aaPredicted RBP29.56■■■□□ 2.32
NPLOC4-215ENST00000574095 SLKQ9H2G2 1235 aaPredicted RBP29.56■■■□□ 2.32
NPLOC4-215ENST00000574095 DTNBO60941 627 aa29.55■■■□□ 2.32
NPLOC4-215ENST00000574095 GHRP10912 638 aa29.55■■■□□ 2.32
NPLOC4-215ENST00000574095 MIS18BP1Q6P0N0 1132 aa29.55■■■□□ 2.32
NPLOC4-215ENST00000574095 LENG9Q96B70 501 aa29.55■■■□□ 2.32
NPLOC4-215ENST00000574095 IFIH1Q9BYX4 1025 aaKnown RBP29.55■■■□□ 2.32
NPLOC4-215ENST00000574095 PRDM6Q9NQX0 595 aa29.55■■■□□ 2.32
NPLOC4-215ENST00000574095 ZNF302Q9NR11 478 aa29.55■■■□□ 2.32
NPLOC4-215ENST00000574095 CDY2AQ9Y6F7 541 aa29.55■■■□□ 2.32
NPLOC4-215ENST00000574095 SLC26A2P50443 739 aa29.54■■■□□ 2.32
NPLOC4-215ENST00000574095 USP11P51784 963 aa29.54■■■□□ 2.32
NPLOC4-215ENST00000574095 TBCKQ8TEA7 893 aa29.54■■■□□ 2.32
NPLOC4-215ENST00000574095 APBB2Q92870 758 aa29.54■■■□□ 2.32
NPLOC4-215ENST00000574095 LOC101059915A0A1B0GWI6 518 aaPredicted RBP29.53■■■□□ 2.32
NPLOC4-215ENST00000574095 AK2P54819 239 aa29.53■■■□□ 2.32
NPLOC4-215ENST00000574095 LPIN1Q14693 890 aa29.53■■■□□ 2.32
NPLOC4-215ENST00000574095 ZNF746Q6NUN9 644 aaPredicted RBP29.53■■■□□ 2.32
NPLOC4-215ENST00000574095 PDXDC2PQ6P474 469 aa29.53■■■□□ 2.32
NPLOC4-215ENST00000574095 BLIDQ8IZY5 108 aa29.53■■■□□ 2.32
NPLOC4-215ENST00000574095 MICALL1Q8N3F8 863 aa29.53■■■□□ 2.32
NPLOC4-215ENST00000574095 PCDHA2Q9Y5H9 948 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms