RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 IL17RAQ96F46 866 aa25.2■■□□□ 1.62
SNF8-216ENST00000573795 PLA2G5P39877 138 aa25.19■■□□□ 1.62
SNF8-216ENST00000573795 CYP2W1Q8TAV3 490 aa25.19■■□□□ 1.62
SNF8-216ENST00000573795 GLG1Q92896 1179 aa25.19■■□□□ 1.62
SNF8-216ENST00000573795 SMARCAD1Q9H4L7 1026 aa25.19■■□□□ 1.62
SNF8-216ENST00000573795 CDY2AQ9Y6F7 541 aa25.19■■□□□ 1.62
SNF8-216ENST00000573795 KIAA1671Q9BY89 1806 aa25.19■■□□□ 1.62
SNF8-216ENST00000573795 ADGRA3Q8IWK6 1321 aa25.18■■□□□ 1.62
SNF8-216ENST00000573795 C5orf67F2Z3F1 127 aa25.18■■□□□ 1.62
SNF8-216ENST00000573795 ENPP3O14638 875 aa25.18■■□□□ 1.62
SNF8-216ENST00000573795 MAFGO15525 162 aa25.18■■□□□ 1.62
SNF8-216ENST00000573795 FUT2Q10981 343 aa25.18■■□□□ 1.62
SNF8-216ENST00000573795 PTCRAQ6ISU1 281 aaPredicted RBP25.18■■□□□ 1.62
SNF8-216ENST00000573795 FIBCD1Q8N539 461 aa25.18■■□□□ 1.62
SNF8-216ENST00000573795 AGO3Q9H9G7 860 aaKnown RBP25.18■■□□□ 1.62
SNF8-216ENST00000573795 JPH1Q9HDC5 661 aaPredicted RBP25.18■■□□□ 1.62
SNF8-216ENST00000573795 ANO2Q9NQ90 1003 aa25.18■■□□□ 1.62
SNF8-216ENST00000573795 KCNH7Q9NS40 1196 aa25.18■■□□□ 1.62
SNF8-216ENST00000573795 C5orf42Q9H799 3197 aa25.17■■□□□ 1.62
SNF8-216ENST00000573795 GRXCR2A6NFK2 248 aa25.17■■□□□ 1.62
SNF8-216ENST00000573795 PI4K2BG5E9Z4 385 aa25.17■■□□□ 1.62
SNF8-216ENST00000573795 H3BQ06 376 aaPredicted RBP25.17■■□□□ 1.62
SNF8-216ENST00000573795 INSRRP14616 1297 aa25.17■■□□□ 1.62
SNF8-216ENST00000573795 CTNNB1P35222 781 aa25.17■■□□□ 1.62
SNF8-216ENST00000573795 IGBP1P78318 339 aa25.17■■□□□ 1.62
SNF8-216ENST00000573795 TMEM31Q5JXX7 168 aa25.17■■□□□ 1.62
SNF8-216ENST00000573795 APOA5Q6Q788 366 aa25.17■■□□□ 1.62
SNF8-216ENST00000573795 TSHZ1Q6ZSZ6 1077 aa25.17■■□□□ 1.62
SNF8-216ENST00000573795 RSPH3Q86UC2 560 aa25.17■■□□□ 1.62
SNF8-216ENST00000573795 ZNF689Q96CS4 500 aaPredicted RBP25.17■■□□□ 1.62
SNF8-216ENST00000573795 PABPC5Q96DU9 382 aaKnown RBP25.17■■□□□ 1.62
SNF8-216ENST00000573795 PGBD1Q96JS3 809 aa25.17■■□□□ 1.62
SNF8-216ENST00000573795 MXRA8Q9BRK3 442 aa25.17■■□□□ 1.62
SNF8-216ENST00000573795 NSUN3Q9H649 340 aaKnown RBP25.17■■□□□ 1.62
SNF8-216ENST00000573795 MRPS6P82932 125 aaKnown RBP25.16■■□□□ 1.62
SNF8-216ENST00000573795 SKAP1Q86WV1 359 aa25.16■■□□□ 1.62
SNF8-216ENST00000573795 CLP1Q92989 425 aaKnown RBP25.16■■□□□ 1.62
SNF8-216ENST00000573795 SLC9A2Q9UBY0 812 aa25.16■■□□□ 1.62
SNF8-216ENST00000573795 FAM86C2PA6NEL3 165 aa25.15■■□□□ 1.62
SNF8-216ENST00000573795 GPR37L1O60883 481 aa25.15■■□□□ 1.62
SNF8-216ENST00000573795 ARP10275 920 aa25.15■■□□□ 1.62
SNF8-216ENST00000573795 BMPR1AP36894 532 aa25.15■■□□□ 1.62
SNF8-216ENST00000573795 ITGB3BPQ13352 177 aaPredicted RBP25.15■■□□□ 1.62
SNF8-216ENST00000573795 GJD3Q8N144 294 aa25.15■■□□□ 1.62
SNF8-216ENST00000573795 CRIPAKQ8N1N5 446 aa25.15■■□□□ 1.62
SNF8-216ENST00000573795 TCEANC2Q96MN5 208 aa25.15■■□□□ 1.62
SNF8-216ENST00000573795 FAM49AQ9H0Q0 323 aaPredicted RBP25.15■■□□□ 1.62
SNF8-216ENST00000573795 RIC8AQ9NPQ8 531 aa25.15■■□□□ 1.62
SNF8-216ENST00000573795 BRPF3Q9ULD4 1205 aa25.15■■□□□ 1.62
SNF8-216ENST00000573795 NFASCO94856 1347 aa25.14■■□□□ 1.62
SNF8-216ENST00000573795 RRN3P2A6NIE6 340 aa25.14■■□□□ 1.62
SNF8-216ENST00000573795 GRM6O15303 877 aa25.14■■□□□ 1.62
SNF8-216ENST00000573795 RB1P06400 928 aa25.14■■□□□ 1.62
SNF8-216ENST00000573795 CD52P31358 61 aa25.14■■□□□ 1.62
SNF8-216ENST00000573795 ACTR2P61160 394 aa25.14■■□□□ 1.62
SNF8-216ENST00000573795 EXOSC10Q01780 885 aaKnown RBP25.14■■□□□ 1.62
SNF8-216ENST00000573795 PLCB4Q15147 1175 aa25.14■■□□□ 1.62
SNF8-216ENST00000573795 RTN4RL1Q86UN2 441 aaPredicted RBP25.14■■□□□ 1.62
SNF8-216ENST00000573795 TRAPPC12Q8WVT3 735 aa25.14■■□□□ 1.62
SNF8-216ENST00000573795 STXBP3O00186 592 aa25.13■■□□□ 1.61
SNF8-216ENST00000573795 DGKIO75912 1065 aa25.13■■□□□ 1.61
SNF8-216ENST00000573795 LTBRP36941 435 aa25.13■■□□□ 1.61
SNF8-216ENST00000573795 NAPAP54920 295 aa25.13■■□□□ 1.61
SNF8-216ENST00000573795 PPP1R18Q6NYC8 613 aa25.13■■□□□ 1.61
SNF8-216ENST00000573795 ANO3Q9BYT9 981 aa25.13■■□□□ 1.61
SNF8-216ENST00000573795 AGO4Q9HCK5 861 aaKnown RBP25.13■■□□□ 1.61
SNF8-216ENST00000573795 RBM28Q9NW13 759 aaKnown RBP25.13■■□□□ 1.61
SNF8-216ENST00000573795 TMEM62Q0P6H9 643 aa25.12■■□□□ 1.61
SNF8-216ENST00000573795 PUS10Q3MIT2 529 aaKnown RBP25.12■■□□□ 1.61
SNF8-216ENST00000573795 CEP55Q53EZ4 464 aa25.12■■□□□ 1.61
SNF8-216ENST00000573795 PLPPR4Q7Z2D5 763 aa25.12■■□□□ 1.61
SNF8-216ENST00000573795 RASEFQ8IZ41 740 aa25.12■■□□□ 1.61
SNF8-216ENST00000573795 FAM122AQ96E09 287 aa25.12■■□□□ 1.61
SNF8-216ENST00000573795 NEK1Q96PY6 1258 aa25.12■■□□□ 1.61
SNF8-216ENST00000573795 C11orf84Q9BUA3 381 aaPredicted RBP25.12■■□□□ 1.61
SNF8-216ENST00000573795 LMAN2LQ9H0V9 348 aa25.12■■□□□ 1.61
SNF8-216ENST00000573795 FAM217BQ9NTX9 383 aaPredicted RBP25.12■■□□□ 1.61
SNF8-216ENST00000573795 TMEM260Q9NX78 707 aa25.12■■□□□ 1.61
SNF8-216ENST00000573795 TRPC6Q9Y210 931 aa25.12■■□□□ 1.61
SNF8-216ENST00000573795 TRPV2Q9Y5S1 764 aa25.12■■□□□ 1.61
SNF8-216ENST00000573795 POTEB3A0JP26 581 aa25.11■■□□□ 1.61
SNF8-216ENST00000573795 ATG7O95352 703 aa25.11■■□□□ 1.61
SNF8-216ENST00000573795 CLK2P49760 499 aaKnown RBP25.11■■□□□ 1.61
SNF8-216ENST00000573795 BTG3Q14201 252 aaPredicted RBP25.11■■□□□ 1.61
SNF8-216ENST00000573795 RTN1Q16799 776 aa25.11■■□□□ 1.61
SNF8-216ENST00000573795 CTC1Q2NKJ3 1217 aa25.11■■□□□ 1.61
SNF8-216ENST00000573795 ADCK5Q3MIX3 580 aa25.11■■□□□ 1.61
SNF8-216ENST00000573795 POTEBQ6S5H4 581 aa25.11■■□□□ 1.61
SNF8-216ENST00000573795 AZI2Q9H6S1 392 aa25.11■■□□□ 1.61
SNF8-216ENST00000573795 RWDD3Q9Y3V2 267 aa25.11■■□□□ 1.61
SNF8-216ENST00000573795 PCDHA2Q9Y5H9 948 aa25.11■■□□□ 1.61
SNF8-216ENST00000573795 SQORQ9Y6N5 450 aa25.11■■□□□ 1.61
SNF8-216ENST00000573795 IGSF9BQ9UPX0 1349 aa25.11■■□□□ 1.61
SNF8-216ENST00000573795 MEIS1O00470 390 aa25.1■■□□□ 1.61
SNF8-216ENST00000573795 RPLP2P05387 115 aaKnown RBP25.1■■□□□ 1.61
SNF8-216ENST00000573795 SREBF1P36956 1147 aa25.1■■□□□ 1.61
SNF8-216ENST00000573795 STAT5BP51692 787 aa25.1■■□□□ 1.61
SNF8-216ENST00000573795 ADCY7P51828 1080 aa25.1■■□□□ 1.61
SNF8-216ENST00000573795 HYAL1Q12794 435 aa25.1■■□□□ 1.61
SNF8-216ENST00000573795 CAMK1Q14012 370 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms