RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 ERAP1Q9NZ08 941 aa19.75■□□□□ 0.75
SMG6-212ENST00000573153 VPS54Q9P1Q0 977 aa19.75■□□□□ 0.75
SMG6-212ENST00000573153 COL4A6Q14031 1691 aa19.75■□□□□ 0.75
SMG6-212ENST00000573153 ABHD14A-ACY1A0A1B0GW23 586 aa19.74■□□□□ 0.75
SMG6-212ENST00000573153 CHRNA1P02708 482 aa19.74■□□□□ 0.75
SMG6-212ENST00000573153 CIITAP33076 1130 aa19.74■□□□□ 0.75
SMG6-212ENST00000573153 ANAPC15P60006 121 aa19.74■□□□□ 0.75
SMG6-212ENST00000573153 GRIK4Q16099 956 aa19.74■□□□□ 0.75
SMG6-212ENST00000573153 PPP2R2DQ66LE6 453 aa19.74■□□□□ 0.75
SMG6-212ENST00000573153 EIF5BO60841 1220 aaKnown RBP19.73■□□□□ 0.75
SMG6-212ENST00000573153 GJB5O95377 273 aa19.73■□□□□ 0.75
SMG6-212ENST00000573153 CTSHP09668 335 aa19.73■□□□□ 0.75
SMG6-212ENST00000573153 PPFIA1Q13136 1202 aa19.73■□□□□ 0.75
SMG6-212ENST00000573153 PLCB4Q15147 1175 aa19.73■□□□□ 0.75
SMG6-212ENST00000573153 ABHD15Q6UXT9 468 aa19.73■□□□□ 0.75
SMG6-212ENST00000573153 REXO1Q8N1G1 1221 aaKnown RBP19.73■□□□□ 0.75
SMG6-212ENST00000573153 CCDC12Q8WUD4 166 aaPredicted RBP19.73■□□□□ 0.75
SMG6-212ENST00000573153 AIFM3Q96NN9 605 aa19.73■□□□□ 0.75
SMG6-212ENST00000573153 SMARCAD1Q9H4L7 1026 aa19.73■□□□□ 0.75
SMG6-212ENST00000573153 PRDM6Q9NQX0 595 aa19.73■□□□□ 0.75
SMG6-212ENST00000573153 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.72■□□□□ 0.75
SMG6-212ENST00000573153 RFXAPO00287 272 aa19.72■□□□□ 0.75
SMG6-212ENST00000573153 LPXNO60711 386 aa19.72■□□□□ 0.75
SMG6-212ENST00000573153 INSRRP14616 1297 aa19.72■□□□□ 0.75
SMG6-212ENST00000573153 ATP4AP20648 1035 aa19.72■□□□□ 0.75
SMG6-212ENST00000573153 MCTP2Q6DN12 878 aa19.72■□□□□ 0.75
SMG6-212ENST00000573153 PLA2G4DQ86XP0 818 aa19.72■□□□□ 0.75
SMG6-212ENST00000573153 CCDC60Q8IWA6 550 aaPredicted RBP19.72■□□□□ 0.75
SMG6-212ENST00000573153 C6orf50Q9HD87 102 aa19.72■□□□□ 0.75
SMG6-212ENST00000573153 MYO9BQ13459 2157 aa19.71■□□□□ 0.75
SMG6-212ENST00000573153 ZBTB42B2RXF5 422 aa19.71■□□□□ 0.75
SMG6-212ENST00000573153 GNAT1P11488 350 aa19.71■□□□□ 0.75
SMG6-212ENST00000573153 SCRN1Q12765 414 aa19.71■□□□□ 0.75
SMG6-212ENST00000573153 PLPPR4Q7Z2D5 763 aa19.71■□□□□ 0.75
SMG6-212ENST00000573153 TRAPPC12Q8WVT3 735 aa19.71■□□□□ 0.75
SMG6-212ENST00000573153 SH3GLB2Q9NR46 395 aa19.71■□□□□ 0.75
SMG6-212ENST00000573153 TUBE1Q9UJT0 475 aa19.71■□□□□ 0.75
SMG6-212ENST00000573153 TPCN1Q9ULQ1 816 aa19.71■□□□□ 0.75
SMG6-212ENST00000573153 KAT6AQ92794 2004 aa19.7■□□□□ 0.74
SMG6-212ENST00000573153 DTNBO60941 627 aa19.7■□□□□ 0.74
SMG6-212ENST00000573153 CTDNEP1O95476 244 aa19.7■□□□□ 0.74
SMG6-212ENST00000573153 SEC24BO95487 1268 aa19.7■□□□□ 0.74
SMG6-212ENST00000573153 POU3F3P20264 500 aaPredicted RBP19.7■□□□□ 0.74
SMG6-212ENST00000573153 KCNJ6P48051 423 aa19.7■□□□□ 0.74
SMG6-212ENST00000573153 HTRA4P83105 476 aaPredicted RBP19.7■□□□□ 0.74
SMG6-212ENST00000573153 IKBKEQ14164 716 aa19.7■□□□□ 0.74
SMG6-212ENST00000573153 FAM177A1Q8N128 213 aaPredicted RBP19.7■□□□□ 0.74
SMG6-212ENST00000573153 GLG1Q92896 1179 aa19.7■□□□□ 0.74
SMG6-212ENST00000573153 UIMC1Q96RL1 719 aa19.7■□□□□ 0.74
SMG6-212ENST00000573153 SDF4Q9BRK5 362 aa19.7■□□□□ 0.74
SMG6-212ENST00000573153 PDRG1Q9NUG6 133 aa19.7■□□□□ 0.74
SMG6-212ENST00000573153 DDX39AO00148 427 aaKnown RBP19.69■□□□□ 0.74
SMG6-212ENST00000573153 GNA11P29992 359 aa19.69■□□□□ 0.74
SMG6-212ENST00000573153 AKAP17AQ02040 695 aaKnown RBP19.69■□□□□ 0.74
SMG6-212ENST00000573153 LPIN1Q14693 890 aa19.69■□□□□ 0.74
SMG6-212ENST00000573153 TAF2Q6P1X5 1199 aa19.69■□□□□ 0.74
SMG6-212ENST00000573153 DAGLBQ8NCG7 672 aa19.69■□□□□ 0.74
SMG6-212ENST00000573153 CCDC148Q8NFR7 591 aa19.69■□□□□ 0.74
SMG6-212ENST00000573153 SP7Q8TDD2 431 aaPredicted RBP19.69■□□□□ 0.74
SMG6-212ENST00000573153 COL25A1Q9BXS0 654 aaPredicted RBP19.69■□□□□ 0.74
SMG6-212ENST00000573153 CERS4Q9HA82 394 aa19.69■□□□□ 0.74
SMG6-212ENST00000573153 WDR81Q562E7 1941 aa19.68■□□□□ 0.74
SMG6-212ENST00000573153 LINC01553A4QN01 128 aa19.68■□□□□ 0.74
SMG6-212ENST00000573153 IPO5O00410 1097 aaKnown RBP19.68■□□□□ 0.74
SMG6-212ENST00000573153 TLL1O43897 1013 aa19.68■□□□□ 0.74
SMG6-212ENST00000573153 EFCAB14O75071 495 aa19.68■□□□□ 0.74
SMG6-212ENST00000573153 DEXIO95424 95 aa19.68■□□□□ 0.74
SMG6-212ENST00000573153 STAT5BP51692 787 aa19.68■□□□□ 0.74
SMG6-212ENST00000573153 STK3Q13188 491 aa19.68■□□□□ 0.74
SMG6-212ENST00000573153 KRT40Q6A162 431 aa19.68■□□□□ 0.74
SMG6-212ENST00000573153 DNAJB3Q8WWF6 145 aa19.68■□□□□ 0.74
SMG6-212ENST00000573153 LINC01599Q8WXQ3 324 aa19.68■□□□□ 0.74
SMG6-212ENST00000573153 MBOAT7Q96N66 472 aa19.68■□□□□ 0.74
SMG6-212ENST00000573153 GAS2L1Q99501 681 aaPredicted RBP19.68■□□□□ 0.74
SMG6-212ENST00000573153 MSH4O15457 936 aa19.67■□□□□ 0.74
SMG6-212ENST00000573153 PFKFB2O60825 505 aa19.67■□□□□ 0.74
SMG6-212ENST00000573153 LARGE1O95461 756 aa19.67■□□□□ 0.74
SMG6-212ENST00000573153 LINC00271P0C7V0 271 aa19.67■□□□□ 0.74
SMG6-212ENST00000573153 AK2P54819 239 aa19.67■□□□□ 0.74
SMG6-212ENST00000573153 SETQ01105 290 aaPredicted RBP19.67■□□□□ 0.74
SMG6-212ENST00000573153 ST3GAL1Q11201 340 aa19.67■□□□□ 0.74
SMG6-212ENST00000573153 FBXO47Q5MNV8 452 aa19.67■□□□□ 0.74
SMG6-212ENST00000573153 B3GNT9Q6UX72 402 aa19.67■□□□□ 0.74
SMG6-212ENST00000573153 BICD2Q8TD16 824 aa19.67■□□□□ 0.74
SMG6-212ENST00000573153 RAD9AQ99638 391 aa19.67■□□□□ 0.74
SMG6-212ENST00000573153 AGO3Q9H9G7 860 aaKnown RBP19.67■□□□□ 0.74
SMG6-212ENST00000573153 RC3H2Q9HBD1 1191 aaKnown RBP19.67■□□□□ 0.74
SMG6-212ENST00000573153 PCDHA4Q9UN74 947 aa19.67■□□□□ 0.74
SMG6-212ENST00000573153 MAFBQ9Y5Q3 323 aaPredicted RBP19.67■□□□□ 0.74
SMG6-212ENST00000573153 MTCH2Q9Y6C9 303 aa19.67■□□□□ 0.74
SMG6-212ENST00000573153 CDY2AQ9Y6F7 541 aa19.67■□□□□ 0.74
SMG6-212ENST00000573153 IGSF9BQ9UPX0 1349 aa19.67■□□□□ 0.74
SMG6-212ENST00000573153 PRRC2BQ5JSZ5 2229 aaKnown RBP19.66■□□□□ 0.74
SMG6-212ENST00000573153 RRN3P2A6NIE6 340 aa19.66■□□□□ 0.74
SMG6-212ENST00000573153 DLL1O00548 723 aa19.66■□□□□ 0.74
SMG6-212ENST00000573153 GHRP10912 638 aa19.66■□□□□ 0.74
SMG6-212ENST00000573153 ZNF76P36508 570 aa19.66■□□□□ 0.74
SMG6-212ENST00000573153 IGBP1P78318 339 aa19.66■□□□□ 0.74
SMG6-212ENST00000573153 PRR16Q569H4 304 aa19.66■□□□□ 0.74
SMG6-212ENST00000573153 TRIM22Q8IYM9 498 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms