RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 CHD9Q3L8U1 2897 aa17.88■□□□□ 0.45
CHD3-215ENST00000572750 ATP2B1P20020 1258 aa17.87■□□□□ 0.45
CHD3-215ENST00000572750 ITGB8P26012 769 aa17.87■□□□□ 0.45
CHD3-215ENST00000572750 MCTP1Q6DN14 999 aa17.87■□□□□ 0.45
CHD3-215ENST00000572750 GDF6Q6KF10 455 aaPredicted RBP17.87■□□□□ 0.45
CHD3-215ENST00000572750 GLG1Q92896 1179 aa17.87■□□□□ 0.45
CHD3-215ENST00000572750 NAP1L4Q99733 375 aaKnown RBP17.87■□□□□ 0.45
CHD3-215ENST00000572750 SEZ6LQ9BYH1 1024 aa17.87■□□□□ 0.45
CHD3-215ENST00000572750 KCNMB3Q9NPA1 279 aa17.87■□□□□ 0.45
CHD3-215ENST00000572750 GTF2IRD1Q9UHL9 959 aa17.87■□□□□ 0.45
CHD3-215ENST00000572750 TRIP12Q14669 1992 aaPredicted RBP17.87■□□□□ 0.45
CHD3-215ENST00000572750 MYH9P35579 1960 aaKnown RBP17.86■□□□□ 0.45
CHD3-215ENST00000572750 KIAA0355O15063 1070 aa17.86■□□□□ 0.45
CHD3-215ENST00000572750 LGR5O75473 907 aa17.86■□□□□ 0.45
CHD3-215ENST00000572750 PSMD10O75832 226 aa17.86■□□□□ 0.45
CHD3-215ENST00000572750 SUPT20HL2P0C7V6 817 aa17.86■□□□□ 0.45
CHD3-215ENST00000572750 SMIM10L2AP0DMW4 78 aa17.86■□□□□ 0.45
CHD3-215ENST00000572750 SMIM10L2BP0DMW5 78 aa17.86■□□□□ 0.45
CHD3-215ENST00000572750 CYP2C9P11712 490 aa17.86■□□□□ 0.45
CHD3-215ENST00000572750 U2AF2P26368 475 aaKnown RBP eCLIP17.86■□□□□ 0.45
CHD3-215ENST00000572750 KRT76Q01546 638 aa17.86■□□□□ 0.45
CHD3-215ENST00000572750 PTPN11Q06124 597 aaPredicted RBP17.86■□□□□ 0.45
CHD3-215ENST00000572750 HIC1Q14526 733 aa17.86■□□□□ 0.45
CHD3-215ENST00000572750 ZNF746Q6NUN9 644 aaPredicted RBP17.86■□□□□ 0.45
CHD3-215ENST00000572750 SESTD1Q86VW0 696 aa17.86■□□□□ 0.45
CHD3-215ENST00000572750 CCDC60Q8IWA6 550 aaPredicted RBP17.86■□□□□ 0.45
CHD3-215ENST00000572750 FAM122AQ96E09 287 aa17.86■□□□□ 0.45
CHD3-215ENST00000572750 RIT2Q99578 217 aa17.86■□□□□ 0.45
CHD3-215ENST00000572750 TEKT3Q9BXF9 490 aa17.86■□□□□ 0.45
CHD3-215ENST00000572750 PPP1R12CQ9BZL4 782 aa17.86■□□□□ 0.45
CHD3-215ENST00000572750 UNC45AQ9H3U1 944 aa17.86■□□□□ 0.45
CHD3-215ENST00000572750 BACH1O14867 736 aa17.85■□□□□ 0.45
CHD3-215ENST00000572750 NEMFO60524 1076 aa17.85■□□□□ 0.45
CHD3-215ENST00000572750 NBR1Q14596 966 aa17.85■□□□□ 0.45
CHD3-215ENST00000572750 PTGISQ16647 500 aa17.85■□□□□ 0.45
CHD3-215ENST00000572750 LARP1BQ659C4 914 aaKnown RBP17.85■□□□□ 0.45
CHD3-215ENST00000572750 MIS18BP1Q6P0N0 1132 aa17.85■□□□□ 0.45
CHD3-215ENST00000572750 ABHD15Q6UXT9 468 aa17.85■□□□□ 0.45
CHD3-215ENST00000572750 SMAP1Q8IYB5 467 aaPredicted RBP17.85■□□□□ 0.45
CHD3-215ENST00000572750 INTS4Q96HW7 963 aaKnown RBP17.85■□□□□ 0.45
CHD3-215ENST00000572750 CTAGE1Q96RT6 745 aa17.85■□□□□ 0.45
CHD3-215ENST00000572750 SMARCAD1Q9H4L7 1026 aa17.85■□□□□ 0.45
CHD3-215ENST00000572750 AZI2Q9H6S1 392 aa17.85■□□□□ 0.45
CHD3-215ENST00000572750 ERAP1Q9NZ08 941 aa17.85■□□□□ 0.45
CHD3-215ENST00000572750 NOD1Q9Y239 953 aa17.85■□□□□ 0.45
CHD3-215ENST00000572750 SAMM50Q9Y512 469 aa17.85■□□□□ 0.45
CHD3-215ENST00000572750 UMODL1Q5DID0 1318 aa17.84■□□□□ 0.45
CHD3-215ENST00000572750 VPS37CA5D8V6 355 aaPredicted RBP17.84■□□□□ 0.45
CHD3-215ENST00000572750 WDR64B1ANS9 1081 aa17.84■□□□□ 0.45
CHD3-215ENST00000572750 ATG7O95352 703 aa17.84■□□□□ 0.45
CHD3-215ENST00000572750 RAG1P15918 1043 aa17.84■□□□□ 0.45
CHD3-215ENST00000572750 MCM7P33993 719 aa17.84■□□□□ 0.45
CHD3-215ENST00000572750 ZNF200P98182 395 aaPredicted RBP17.84■□□□□ 0.45
CHD3-215ENST00000572750 C9orf50Q5SZB4 431 aa17.84■□□□□ 0.45
CHD3-215ENST00000572750 HAS1Q92839 578 aa17.84■□□□□ 0.45
CHD3-215ENST00000572750 RNPEPQ9H4A4 650 aa17.84■□□□□ 0.45
CHD3-215ENST00000572750 VAV3Q9UKW4 847 aa17.84■□□□□ 0.45
CHD3-215ENST00000572750 NCOR1O75376 2440 aa17.84■□□□□ 0.45
CHD3-215ENST00000572750 KAT6AQ92794 2004 aa17.83■□□□□ 0.45
CHD3-215ENST00000572750 IGSF9BQ9UPX0 1349 aa17.83■□□□□ 0.44
CHD3-215ENST00000572750 IGKV6D-21A0A0A0MT36 114 aa17.83■□□□□ 0.44
CHD3-215ENST00000572750 STAT5BP51692 787 aa17.83■□□□□ 0.44
CHD3-215ENST00000572750 SHHQ15465 462 aa17.83■□□□□ 0.44
CHD3-215ENST00000572750 CALCRLQ16602 461 aa17.83■□□□□ 0.44
CHD3-215ENST00000572750 TJAP1Q5JTD0 557 aa17.83■□□□□ 0.44
CHD3-215ENST00000572750 TTC38Q5R3I4 469 aa17.83■□□□□ 0.44
CHD3-215ENST00000572750 LMBR1Q8WVP7 490 aa17.83■□□□□ 0.44
CHD3-215ENST00000572750 BADQ92934 168 aa17.83■□□□□ 0.44
CHD3-215ENST00000572750 NOC4LQ9BVI4 516 aaKnown RBP17.83■□□□□ 0.44
CHD3-215ENST00000572750 HIPK3Q9H422 1215 aa17.83■□□□□ 0.44
CHD3-215ENST00000572750 ZNF302Q9NR11 478 aa17.83■□□□□ 0.44
CHD3-215ENST00000572750 DISC1Q9NRI5 854 aa17.83■□□□□ 0.44
CHD3-215ENST00000572750 NOL7Q9UMY1 257 aaKnown RBP17.83■□□□□ 0.44
CHD3-215ENST00000572750 TRPC6Q9Y210 931 aa17.83■□□□□ 0.44
CHD3-215ENST00000572750 C17orf102A2RUQ5 167 aa17.82■□□□□ 0.44
CHD3-215ENST00000572750 TBX3O15119 743 aa17.82■□□□□ 0.44
CHD3-215ENST00000572750 MARCH6O60337 910 aa17.82■□□□□ 0.44
CHD3-215ENST00000572750 PSAPP07602 524 aa17.82■□□□□ 0.44
CHD3-215ENST00000572750 FOSL2P15408 326 aa17.82■□□□□ 0.44
CHD3-215ENST00000572750 HOXC8P31273 242 aa17.82■□□□□ 0.44
CHD3-215ENST00000572750 CYP2C18P33260 490 aa17.82■□□□□ 0.44
CHD3-215ENST00000572750 JAK3P52333 1124 aa17.82■□□□□ 0.44
CHD3-215ENST00000572750 PPFIA1Q13136 1202 aa17.82■□□□□ 0.44
CHD3-215ENST00000572750 PLCB4Q15147 1175 aa17.82■□□□□ 0.44
CHD3-215ENST00000572750 UGCGQ16739 394 aa17.82■□□□□ 0.44
CHD3-215ENST00000572750 FAM160B1Q5W0V3 765 aa17.82■□□□□ 0.44
CHD3-215ENST00000572750 SWSAP1Q6NVH7 229 aa17.82■□□□□ 0.44
CHD3-215ENST00000572750 PDXDC2PQ6P474 469 aa17.82■□□□□ 0.44
CHD3-215ENST00000572750 B3GNT9Q6UX72 402 aa17.82■□□□□ 0.44
CHD3-215ENST00000572750 MIER3Q7Z3K6 550 aa17.82■□□□□ 0.44
CHD3-215ENST00000572750 AFAP1L1Q8TED9 768 aa17.82■□□□□ 0.44
CHD3-215ENST00000572750 FAM20AQ96MK3 541 aa17.82■□□□□ 0.44
CHD3-215ENST00000572750 LBHD1Q9BQE6 289 aaPredicted RBP17.82■□□□□ 0.44
CHD3-215ENST00000572750 TMEM60Q9H2L4 133 aa17.82■□□□□ 0.44
CHD3-215ENST00000572750 SETD4Q9NVD3 440 aa17.82■□□□□ 0.44
CHD3-215ENST00000572750 GABBR1Q9UBS5 961 aa17.82■□□□□ 0.44
CHD3-215ENST00000572750 PCDHA10Q9Y5I2 948 aa17.82■□□□□ 0.44
CHD3-215ENST00000572750 SCN5AQ14524 2016 aa17.82■□□□□ 0.44
CHD3-215ENST00000572750 MYH15Q9Y2K3 1946 aa17.81■□□□□ 0.44
CHD3-215ENST00000572750 TMEM265A0A087WTH1 108 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms