RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 RUFY4Q6ZNE9 571 aa34.51■■■■□ 3.12
CTDNEP1-206ENST00000571409 TUBE1Q9UJT0 475 aa34.51■■■■□ 3.12
CTDNEP1-206ENST00000571409 IGBP1P78318 339 aa34.5■■■■□ 3.11
CTDNEP1-206ENST00000571409 TAF2Q6P1X5 1199 aa34.5■■■■□ 3.11
CTDNEP1-206ENST00000571409 ZBED2Q9BTP6 218 aa34.5■■■■□ 3.11
CTDNEP1-206ENST00000571409 ATG7O95352 703 aa34.49■■■■□ 3.11
CTDNEP1-206ENST00000571409 STAT5BP51692 787 aa34.49■■■■□ 3.11
CTDNEP1-206ENST00000571409 NLRP5P59047 1200 aa34.49■■■■□ 3.11
CTDNEP1-206ENST00000571409 SETQ01105 290 aaPredicted RBP34.49■■■■□ 3.11
CTDNEP1-206ENST00000571409 CPLX2Q6PUV4 134 aaKnown RBP34.49■■■■□ 3.11
CTDNEP1-206ENST00000571409 PLPPR4Q7Z2D5 763 aa34.49■■■■□ 3.11
CTDNEP1-206ENST00000571409 UIMC1Q96RL1 719 aa34.49■■■■□ 3.11
CTDNEP1-206ENST00000571409 OSBPL7Q9BZF2 842 aa34.49■■■■□ 3.11
CTDNEP1-206ENST00000571409 TRPC6Q9Y210 931 aa34.49■■■■□ 3.11
CTDNEP1-206ENST00000571409 MBLAC1A4D2B0 266 aaPredicted RBP34.48■■■■□ 3.11
CTDNEP1-206ENST00000571409 IPO5O00410 1097 aaKnown RBP34.48■■■■□ 3.11
CTDNEP1-206ENST00000571409 ARHGEF15O94989 841 aa34.48■■■■□ 3.11
CTDNEP1-206ENST00000571409 DEXIO95424 95 aa34.48■■■■□ 3.11
CTDNEP1-206ENST00000571409 CCNE2O96020 404 aa34.48■■■■□ 3.11
CTDNEP1-206ENST00000571409 INSRRP14616 1297 aa34.48■■■■□ 3.11
CTDNEP1-206ENST00000571409 IGFBP4P22692 258 aa34.48■■■■□ 3.11
CTDNEP1-206ENST00000571409 FAM26DQ5JW98 314 aa34.48■■■■□ 3.11
CTDNEP1-206ENST00000571409 MARCH8Q5T0T0 291 aa34.48■■■■□ 3.11
CTDNEP1-206ENST00000571409 ZNF577Q9BSK1 485 aa34.48■■■■□ 3.11
CTDNEP1-206ENST00000571409 MICAL3Q7RTP6 2002 aa34.47■■■■□ 3.11
CTDNEP1-206ENST00000571409 RRN3P2A6NIE6 340 aa34.47■■■■□ 3.11
CTDNEP1-206ENST00000571409 DHX15O43143 795 aaKnown RBP34.47■■■■□ 3.11
CTDNEP1-206ENST00000571409 ANAPC15P60006 121 aa34.47■■■■□ 3.11
CTDNEP1-206ENST00000571409 TAP1Q03518 808 aa34.47■■■■□ 3.11
CTDNEP1-206ENST00000571409 PLCB4Q15147 1175 aa34.47■■■■□ 3.11
CTDNEP1-206ENST00000571409 RPAINQ86UA6 219 aa34.47■■■■□ 3.11
CTDNEP1-206ENST00000571409 USP38Q8NB14 1042 aa34.47■■■■□ 3.11
CTDNEP1-206ENST00000571409 SEPT8Q92599 483 aa34.47■■■■□ 3.11
CTDNEP1-206ENST00000571409 TNPO1Q92973 898 aaKnown RBP34.47■■■■□ 3.11
CTDNEP1-206ENST00000571409 CERS4Q9HA82 394 aa34.47■■■■□ 3.11
CTDNEP1-206ENST00000571409 GJB5O95377 273 aa34.46■■■■□ 3.11
CTDNEP1-206ENST00000571409 ABHD15Q6UXT9 468 aa34.46■■■■□ 3.11
CTDNEP1-206ENST00000571409 LIN28BQ6ZN17 250 aaKnown RBP eCLIP34.46■■■■□ 3.11
CTDNEP1-206ENST00000571409 RSPH3Q86UC2 560 aa34.46■■■■□ 3.11
CTDNEP1-206ENST00000571409 CHRNA1P02708 482 aa34.45■■■■□ 3.11
CTDNEP1-206ENST00000571409 CIITAP33076 1130 aa34.45■■■■□ 3.11
CTDNEP1-206ENST00000571409 MKRN4PQ13434 485 aaPredicted RBP34.45■■■■□ 3.11
CTDNEP1-206ENST00000571409 PRR16Q569H4 304 aa34.45■■■■□ 3.11
CTDNEP1-206ENST00000571409 DNAJB3Q8WWF6 145 aa34.45■■■■□ 3.11
CTDNEP1-206ENST00000571409 PPM1EQ8WY54 764 aa34.45■■■■□ 3.11
CTDNEP1-206ENST00000571409 ZBTB10Q96DT7 871 aa34.45■■■■□ 3.11
CTDNEP1-206ENST00000571409 SIP14410 1827 aa34.45■■■■□ 3.11
CTDNEP1-206ENST00000571409 CHD7Q9P2D1 2997 aa34.45■■■■□ 3.11
CTDNEP1-206ENST00000571409 MYO9BQ13459 2157 aa34.45■■■■□ 3.1
CTDNEP1-206ENST00000571409 IGKV6D-21A0A0A0MT36 114 aa34.44■■■■□ 3.1
CTDNEP1-206ENST00000571409 LCHNA4D1U4 455 aa34.44■■■■□ 3.1
CTDNEP1-206ENST00000571409 BACH1O14867 736 aa34.44■■■■□ 3.1
CTDNEP1-206ENST00000571409 AMHP03971 560 aa34.44■■■■□ 3.1
CTDNEP1-206ENST00000571409 SCRN1Q12765 414 aa34.44■■■■□ 3.1
CTDNEP1-206ENST00000571409 FAM117BQ6P1L5 589 aa34.44■■■■□ 3.1
CTDNEP1-206ENST00000571409 TBC1D22BQ9NU19 505 aa34.44■■■■□ 3.1
CTDNEP1-206ENST00000571409 PCDHA4Q9UN74 947 aa34.44■■■■□ 3.1
CTDNEP1-206ENST00000571409 UNC80Q8N2C7 3258 aa34.43■■■■□ 3.1
CTDNEP1-206ENST00000571409 POTEB3A0JP26 581 aa34.43■■■■□ 3.1
CTDNEP1-206ENST00000571409 SLC26A2P50443 739 aa34.43■■■■□ 3.1
CTDNEP1-206ENST00000571409 FAM160B1Q5W0V3 765 aa34.43■■■■□ 3.1
CTDNEP1-206ENST00000571409 POTEBQ6S5H4 581 aa34.43■■■■□ 3.1
CTDNEP1-206ENST00000571409 CCDC60Q8IWA6 550 aaPredicted RBP34.43■■■■□ 3.1
CTDNEP1-206ENST00000571409 MYOCDQ8IZQ8 938 aa34.43■■■■□ 3.1
CTDNEP1-206ENST00000571409 TRAPPC12Q8WVT3 735 aa34.43■■■■□ 3.1
CTDNEP1-206ENST00000571409 AIFM3Q96NN9 605 aa34.43■■■■□ 3.1
CTDNEP1-206ENST00000571409 RAD9AQ99638 391 aa34.43■■■■□ 3.1
CTDNEP1-206ENST00000571409 IFIH1Q9BYX4 1025 aaKnown RBP34.43■■■■□ 3.1
CTDNEP1-206ENST00000571409 SLKQ9H2G2 1235 aaPredicted RBP34.43■■■■□ 3.1
CTDNEP1-206ENST00000571409 DLL1O00548 723 aa34.42■■■■□ 3.1
CTDNEP1-206ENST00000571409 MGAT3Q09327 533 aa34.42■■■■□ 3.1
CTDNEP1-206ENST00000571409 MIS18BP1Q6P0N0 1132 aa34.42■■■■□ 3.1
CTDNEP1-206ENST00000571409 APBB2Q92870 758 aa34.42■■■■□ 3.1
CTDNEP1-206ENST00000571409 LENG9Q96B70 501 aa34.42■■■■□ 3.1
CTDNEP1-206ENST00000571409 TPCN1Q9ULQ1 816 aa34.42■■■■□ 3.1
CTDNEP1-206ENST00000571409 RFXAPO00287 272 aa34.41■■■■□ 3.1
CTDNEP1-206ENST00000571409 ARNTL2Q8WYA1 636 aa34.41■■■■□ 3.1
CTDNEP1-206ENST00000571409 FAM49AQ9H0Q0 323 aaPredicted RBP34.41■■■■□ 3.1
CTDNEP1-206ENST00000571409 ZNF302Q9NR11 478 aa34.41■■■■□ 3.1
CTDNEP1-206ENST00000571409 TCEAL9Q9UHQ7 104 aa34.41■■■■□ 3.1
CTDNEP1-206ENST00000571409 EPOPA6NHQ4 379 aa34.4■■■■□ 3.1
CTDNEP1-206ENST00000571409 EDIL3O43854 480 aa34.4■■■■□ 3.1
CTDNEP1-206ENST00000571409 CDKL5O76039 1030 aa34.4■■■■□ 3.1
CTDNEP1-206ENST00000571409 GHRP10912 638 aa34.4■■■■□ 3.1
CTDNEP1-206ENST00000571409 USP11P51784 963 aa34.4■■■■□ 3.1
CTDNEP1-206ENST00000571409 ZNF746Q6NUN9 644 aaPredicted RBP34.4■■■■□ 3.1
CTDNEP1-206ENST00000571409 SWSAP1Q6NVH7 229 aa34.4■■■■□ 3.1
CTDNEP1-206ENST00000571409 SPRED2Q7Z698 418 aa34.4■■■■□ 3.1
CTDNEP1-206ENST00000571409 BLIDQ8IZY5 108 aa34.4■■■■□ 3.1
CTDNEP1-206ENST00000571409 TBCKQ8TEA7 893 aa34.4■■■■□ 3.1
CTDNEP1-206ENST00000571409 CDY2AQ9Y6F7 541 aa34.4■■■■□ 3.1
CTDNEP1-206ENST00000571409 PFKFB2O60825 505 aa34.39■■■■□ 3.1
CTDNEP1-206ENST00000571409 RPLP2P05387 115 aaKnown RBP34.39■■■■□ 3.1
CTDNEP1-206ENST00000571409 AK2P54819 239 aa34.39■■■■□ 3.1
CTDNEP1-206ENST00000571409 ANKRD1Q15327 319 aa34.39■■■■□ 3.1
CTDNEP1-206ENST00000571409 CCDC85BQ15834 202 aaPredicted RBP34.39■■■■□ 3.1
CTDNEP1-206ENST00000571409 PDXDC2PQ6P474 469 aa34.39■■■■□ 3.1
CTDNEP1-206ENST00000571409 C22orf23Q9BZE7 217 aa34.39■■■■□ 3.1
CTDNEP1-206ENST00000571409 PRUNE2Q8WUY3 3088 aa34.38■■■■□ 3.09
CTDNEP1-206ENST00000571409 HBP1O60381 514 aa34.38■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms