RNA–Protein interactions for RNA: ENST00000569732.1

CNOT1-218, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 906 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-218ENST00000569732 NDUFB5O43674 189 aa8.33□□□□□ -1.08
CNOT1-218ENST00000569732 NDUFB10O96000 172 aa8.33□□□□□ -1.08
CNOT1-218ENST00000569732 APPP05067 770 aa8.33□□□□□ -1.08
CNOT1-218ENST00000569732 CA3P07451 260 aa8.33□□□□□ -1.08
CNOT1-218ENST00000569732 CYP21A2P08686 494 aa8.33□□□□□ -1.08
CNOT1-218ENST00000569732 MYOGP15173 224 aa8.33□□□□□ -1.08
CNOT1-218ENST00000569732 BRD2P25440 801 aaKnown RBP8.33□□□□□ -1.08
CNOT1-218ENST00000569732 RFC2P35250 354 aa8.33□□□□□ -1.08
CNOT1-218ENST00000569732 EIF1AXP47813 144 aaKnown RBP8.33□□□□□ -1.08
CNOT1-218ENST00000569732 BEX3Q00994 111 aa8.33□□□□□ -1.08
CNOT1-218ENST00000569732 NECTIN1Q15223 517 aa8.33□□□□□ -1.08
CNOT1-218ENST00000569732 FSCN1Q16658 493 aaKnown RBP8.33□□□□□ -1.08
CNOT1-218ENST00000569732 NOL8Q76FK4 1167 aaKnown RBP8.33□□□□□ -1.08
CNOT1-218ENST00000569732 FAM133AQ8N9E0 248 aa8.33□□□□□ -1.08
CNOT1-218ENST00000569732 RHBDD1Q8TEB9 315 aa8.33□□□□□ -1.08
CNOT1-218ENST00000569732 KCNB2Q92953 911 aa8.33□□□□□ -1.08
CNOT1-218ENST00000569732 KIFC2Q96AC6 838 aa8.33□□□□□ -1.08
CNOT1-218ENST00000569732 NUP88Q99567 741 aaPredicted RBP8.33□□□□□ -1.08
CNOT1-218ENST00000569732 GRIP2Q9C0E4 1043 aa8.33□□□□□ -1.08
CNOT1-218ENST00000569732 RAVER2Q9HCJ3 691 aaKnown RBP8.33□□□□□ -1.08
CNOT1-218ENST00000569732 INCENPQ9NQS7 918 aa8.33□□□□□ -1.08
CNOT1-218ENST00000569732 BRPF3Q9ULD4 1205 aa8.33□□□□□ -1.08
CNOT1-218ENST00000569732 RBM8AQ9Y5S9 174 aaKnown RBP8.33□□□□□ -1.08
CNOT1-218ENST00000569732 GRIN2DO15399 1336 aa8.32□□□□□ -1.08
CNOT1-218ENST00000569732 LAMA4Q16363 1823 aa8.32□□□□□ -1.08
CNOT1-218ENST00000569732 MINDY4BA8MYZ0 360 aa8.32□□□□□ -1.08
CNOT1-218ENST00000569732 PRR33A8MZF0 331 aa8.32□□□□□ -1.08
CNOT1-218ENST00000569732 KIF28PB7ZC32 967 aa8.32□□□□□ -1.08
CNOT1-218ENST00000569732 PI4K2BG5E9Z4 385 aa8.32□□□□□ -1.08
CNOT1-218ENST00000569732 CAPN5O15484 640 aaPredicted RBP8.32□□□□□ -1.08
CNOT1-218ENST00000569732 RNF144AP50876 292 aaPredicted RBP8.32□□□□□ -1.08
CNOT1-218ENST00000569732 CNTN2Q02246 1040 aa8.32□□□□□ -1.08
CNOT1-218ENST00000569732 COL9A3Q14050 684 aaPredicted RBP8.32□□□□□ -1.08
CNOT1-218ENST00000569732 C11orf91Q3C1V1 193 aa8.32□□□□□ -1.08
CNOT1-218ENST00000569732 TKFCQ3LXA3 575 aa8.32□□□□□ -1.08
CNOT1-218ENST00000569732 IQSEC1Q6DN90 963 aa8.32□□□□□ -1.08
CNOT1-218ENST00000569732 CASC1Q6TDU7 716 aa8.32□□□□□ -1.08
CNOT1-218ENST00000569732 STOX1Q6ZVD7 989 aa8.32□□□□□ -1.08
CNOT1-218ENST00000569732 GMCL1P1Q8NEA9 526 aa8.32□□□□□ -1.08
CNOT1-218ENST00000569732 STAG1Q8WVM7 1258 aa8.32□□□□□ -1.08
CNOT1-218ENST00000569732 MKL1Q969V6 931 aa8.32□□□□□ -1.08
CNOT1-218ENST00000569732 SCLYQ96I15 445 aa8.32□□□□□ -1.08
CNOT1-218ENST00000569732 INSM2Q96T92 566 aaPredicted RBP8.32□□□□□ -1.08
CNOT1-218ENST00000569732 TRPV6Q9H1D0 765 aa8.32□□□□□ -1.08
CNOT1-218ENST00000569732 ALDH8A1Q9H2A2 487 aaPredicted RBP8.32□□□□□ -1.08
CNOT1-218ENST00000569732 ACAD9Q9H845 621 aa8.32□□□□□ -1.08
CNOT1-218ENST00000569732 MKNK2Q9HBH9 465 aa8.32□□□□□ -1.08
CNOT1-218ENST00000569732 ZNF287Q9HBT7 754 aa8.32□□□□□ -1.08
CNOT1-218ENST00000569732 PLIN4Q96Q06 1357 aa8.32□□□□□ -1.08
CNOT1-218ENST00000569732 TCF20Q9UGU0 1960 aaKnown RBP8.31□□□□□ -1.08
CNOT1-218ENST00000569732 NEDD4P46934 1319 aa8.31□□□□□ -1.08
CNOT1-218ENST00000569732 IGKV6D-41A0A0C4DH26 115 aa8.31□□□□□ -1.08
CNOT1-218ENST00000569732 SLC27A2O14975 620 aa8.31□□□□□ -1.08
CNOT1-218ENST00000569732 DYNC1LI2O43237 492 aaPredicted RBP8.31□□□□□ -1.08
CNOT1-218ENST00000569732 EPB41L2O43491 1005 aaKnown RBP8.31□□□□□ -1.08
CNOT1-218ENST00000569732 ORC4O43929 436 aa8.31□□□□□ -1.08
CNOT1-218ENST00000569732 PRDM1O75626 825 aa8.31□□□□□ -1.08
CNOT1-218ENST00000569732 BAIAP3O94812 1187 aa8.31□□□□□ -1.08
CNOT1-218ENST00000569732 UPP2O95045 317 aa8.31□□□□□ -1.08
CNOT1-218ENST00000569732 ZNF16P17020 682 aaPredicted RBP8.31□□□□□ -1.08
CNOT1-218ENST00000569732 STAT2P52630 851 aa8.31□□□□□ -1.08
CNOT1-218ENST00000569732 HAND2P61296 217 aa8.31□□□□□ -1.08
CNOT1-218ENST00000569732 RTN1Q16799 776 aa8.31□□□□□ -1.08
CNOT1-218ENST00000569732 RGL4Q8IZJ4 473 aa8.31□□□□□ -1.08
CNOT1-218ENST00000569732 GIPC2Q8TF65 315 aa8.31□□□□□ -1.08
CNOT1-218ENST00000569732 ARNTL2Q8WYA1 636 aa8.31□□□□□ -1.08
CNOT1-218ENST00000569732 VWCEQ96DN2 955 aa8.31□□□□□ -1.08
CNOT1-218ENST00000569732 USP26Q9BXU7 913 aa8.31□□□□□ -1.08
CNOT1-218ENST00000569732 RBCK1Q9BYM8 510 aa8.31□□□□□ -1.08
CNOT1-218ENST00000569732 PHACTR1Q9C0D0 580 aa8.31□□□□□ -1.08
CNOT1-218ENST00000569732 VTA1Q9NP79 307 aa8.31□□□□□ -1.08
CNOT1-218ENST00000569732 C11orf16Q9NQ32 467 aa8.31□□□□□ -1.08
CNOT1-218ENST00000569732 LMCD1Q9NZU5 365 aa8.31□□□□□ -1.08
CNOT1-218ENST00000569732 CLIP2Q9UDT6 1046 aa8.31□□□□□ -1.08
CNOT1-218ENST00000569732 CTNNA3Q9UI47 895 aa8.31□□□□□ -1.08
CNOT1-218ENST00000569732 COL4A4P53420 1690 aaPredicted RBP8.3□□□□□ -1.08
CNOT1-218ENST00000569732 TNKSO95271 1327 aa8.3□□□□□ -1.08
CNOT1-218ENST00000569732 TANC1Q9C0D5 1861 aa8.3□□□□□ -1.08
CNOT1-218ENST00000569732 LOC102724159A0A0B4J2E5 919 aa8.3□□□□□ -1.08
CNOT1-218ENST00000569732 RFXAPO00287 272 aa8.3□□□□□ -1.08
CNOT1-218ENST00000569732 ZNF213O14771 459 aa8.3□□□□□ -1.08
CNOT1-218ENST00000569732 ZBTB39O15060 712 aa8.3□□□□□ -1.08
CNOT1-218ENST00000569732 SPINT1O43278 529 aa8.3□□□□□ -1.08
CNOT1-218ENST00000569732 TTLL1O95922 423 aa8.3□□□□□ -1.08
CNOT1-218ENST00000569732 BMP3P12645 472 aa8.3□□□□□ -1.08
CNOT1-218ENST00000569732 HSPA4P34932 840 aa8.3□□□□□ -1.08
CNOT1-218ENST00000569732 NOVP48745 357 aa8.3□□□□□ -1.08
CNOT1-218ENST00000569732 CPT1AP50416 773 aa8.3□□□□□ -1.08
CNOT1-218ENST00000569732 TAP1Q03518 808 aa8.3□□□□□ -1.08
CNOT1-218ENST00000569732 TTLL4Q14679 1199 aa8.3□□□□□ -1.08
CNOT1-218ENST00000569732 PWP2Q15269 919 aaKnown RBP8.3□□□□□ -1.08
CNOT1-218ENST00000569732 IMMTQ16891 758 aaKnown RBP8.3□□□□□ -1.08
CNOT1-218ENST00000569732 CREB3L3Q68CJ9 461 aa8.3□□□□□ -1.08
CNOT1-218ENST00000569732 TAPT1Q6NXT6 567 aa8.3□□□□□ -1.08
CNOT1-218ENST00000569732 DEFB128Q7Z7B8 93 aa8.3□□□□□ -1.08
CNOT1-218ENST00000569732 FAM160B2Q86V87 743 aa8.3□□□□□ -1.08
CNOT1-218ENST00000569732 HERC6Q8IVU3 1022 aa8.3□□□□□ -1.08
CNOT1-218ENST00000569732 STK11IPQ8N1F8 1099 aa8.3□□□□□ -1.08
CNOT1-218ENST00000569732 IL17RAQ96F46 866 aa8.3□□□□□ -1.08
CNOT1-218ENST00000569732 CITED4Q96RK1 184 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms