RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 PPP1R18Q6NYC8 613 aa15.84■□□□□ 0.13
GTF3C1-211ENST00000569653 Q6ZUG5 572 aa15.84■□□□□ 0.13
GTF3C1-211ENST00000569653 RPAINQ86UA6 219 aa15.84■□□□□ 0.13
GTF3C1-211ENST00000569653 TRAPPC12Q8WVT3 735 aa15.84■□□□□ 0.13
GTF3C1-211ENST00000569653 LINC01599Q8WXQ3 324 aa15.84■□□□□ 0.13
GTF3C1-211ENST00000569653 SEPT8Q92599 483 aa15.84■□□□□ 0.13
GTF3C1-211ENST00000569653 CDHR1Q96JP9 859 aa15.84■□□□□ 0.13
GTF3C1-211ENST00000569653 UIMC1Q96RL1 719 aa15.84■□□□□ 0.13
GTF3C1-211ENST00000569653 TGS1Q96RS0 853 aaKnown RBP15.84■□□□□ 0.13
GTF3C1-211ENST00000569653 AGO4Q9HCK5 861 aaKnown RBP15.84■□□□□ 0.13
GTF3C1-211ENST00000569653 JPH1Q9HDC5 661 aaPredicted RBP15.84■□□□□ 0.13
GTF3C1-211ENST00000569653 ERAP1Q9NZ08 941 aa15.84■□□□□ 0.13
GTF3C1-211ENST00000569653 MYH9P35579 1960 aaKnown RBP15.84■□□□□ 0.13
GTF3C1-211ENST00000569653 SMCO2A6NFE2 343 aa15.83■□□□□ 0.12
GTF3C1-211ENST00000569653 FAM86B1E9PN63 330 aa15.83■□□□□ 0.12
GTF3C1-211ENST00000569653 TNFRSF10AO00220 468 aa15.83■□□□□ 0.12
GTF3C1-211ENST00000569653 MEIS1O00470 390 aa15.83■□□□□ 0.12
GTF3C1-211ENST00000569653 EDIL3O43854 480 aa15.83■□□□□ 0.12
GTF3C1-211ENST00000569653 AMHP03971 560 aa15.83■□□□□ 0.12
GTF3C1-211ENST00000569653 FAM86B2P0C5J1 330 aa15.83■□□□□ 0.12
GTF3C1-211ENST00000569653 GHRP10912 638 aa15.83■□□□□ 0.12
GTF3C1-211ENST00000569653 GNAT1P11488 350 aa15.83■□□□□ 0.12
GTF3C1-211ENST00000569653 SREBF1P36956 1147 aa15.83■□□□□ 0.12
GTF3C1-211ENST00000569653 ACTR2P61160 394 aa15.83■□□□□ 0.12
GTF3C1-211ENST00000569653 SKIV2LQ15477 1246 aaKnown RBP15.83■□□□□ 0.12
GTF3C1-211ENST00000569653 CEP55Q53EZ4 464 aa15.83■□□□□ 0.12
GTF3C1-211ENST00000569653 SYNE3Q6ZMZ3 975 aa15.83■□□□□ 0.12
GTF3C1-211ENST00000569653 DNAJB3Q8WWF6 145 aa15.83■□□□□ 0.12
GTF3C1-211ENST00000569653 BRF1Q92994 677 aa15.83■□□□□ 0.12
GTF3C1-211ENST00000569653 TOP1MTQ969P6 601 aa15.83■□□□□ 0.12
GTF3C1-211ENST00000569653 JAKMIP1Q96N16 626 aaKnown RBP15.83■□□□□ 0.12
GTF3C1-211ENST00000569653 AGO3Q9H9G7 860 aaKnown RBP15.83■□□□□ 0.12
GTF3C1-211ENST00000569653 SLC9A2Q9UBY0 812 aa15.83■□□□□ 0.12
GTF3C1-211ENST00000569653 TUBE1Q9UJT0 475 aa15.83■□□□□ 0.12
GTF3C1-211ENST00000569653 IGLV3-22A0A075B6J6 115 aa15.82■□□□□ 0.12
GTF3C1-211ENST00000569653 DHX15O43143 795 aaKnown RBP15.82■□□□□ 0.12
GTF3C1-211ENST00000569653 UPP2O95045 317 aa15.82■□□□□ 0.12
GTF3C1-211ENST00000569653 INSRRP14616 1297 aa15.82■□□□□ 0.12
GTF3C1-211ENST00000569653 RCAN1P53805 252 aa15.82■□□□□ 0.12
GTF3C1-211ENST00000569653 IGBP1P78318 339 aa15.82■□□□□ 0.12
GTF3C1-211ENST00000569653 KRT32Q14532 448 aa15.82■□□□□ 0.12
GTF3C1-211ENST00000569653 PLCB4Q15147 1175 aa15.82■□□□□ 0.12
GTF3C1-211ENST00000569653 PFKFB3Q16875 520 aaPredicted RBP15.82■□□□□ 0.12
GTF3C1-211ENST00000569653 JAKMIP3Q5VZ66 844 aa15.82■□□□□ 0.12
GTF3C1-211ENST00000569653 GLG1Q92896 1179 aa15.82■□□□□ 0.12
GTF3C1-211ENST00000569653 UHRF1Q96T88 793 aaPredicted RBP15.82■□□□□ 0.12
GTF3C1-211ENST00000569653 AGXT2Q9BYV1 514 aa15.82■□□□□ 0.12
GTF3C1-211ENST00000569653 IFIH1Q9BYX4 1025 aaKnown RBP15.82■□□□□ 0.12
GTF3C1-211ENST00000569653 SMARCAD1Q9H4L7 1026 aa15.82■□□□□ 0.12
GTF3C1-211ENST00000569653 RC3H2Q9HBD1 1191 aaKnown RBP15.82■□□□□ 0.12
GTF3C1-211ENST00000569653 INSL6Q9Y581 213 aa15.82■□□□□ 0.12
GTF3C1-211ENST00000569653 CDY2AQ9Y6F7 541 aa15.82■□□□□ 0.12
GTF3C1-211ENST00000569653 NFASCO94856 1347 aa15.82■□□□□ 0.12
GTF3C1-211ENST00000569653 C5orf42Q9H799 3197 aa15.82■□□□□ 0.12
GTF3C1-211ENST00000569653 NTRK3Q16288 839 aa15.81■□□□□ 0.12
GTF3C1-211ENST00000569653 FBXO47Q5MNV8 452 aa15.81■□□□□ 0.12
GTF3C1-211ENST00000569653 TAF2Q6P1X5 1199 aa15.81■□□□□ 0.12
GTF3C1-211ENST00000569653 PHKBQ93100 1093 aa15.81■□□□□ 0.12
GTF3C1-211ENST00000569653 FAM49AQ9H0Q0 323 aaPredicted RBP15.81■□□□□ 0.12
GTF3C1-211ENST00000569653 IGKV6D-21A0A0A0MT36 114 aa15.8■□□□□ 0.12
GTF3C1-211ENST00000569653 MAFGO15525 162 aa15.8■□□□□ 0.12
GTF3C1-211ENST00000569653 ATG7O95352 703 aa15.8■□□□□ 0.12
GTF3C1-211ENST00000569653 SCG2P13521 617 aa15.8■□□□□ 0.12
GTF3C1-211ENST00000569653 ATP4AP20648 1035 aa15.8■□□□□ 0.12
GTF3C1-211ENST00000569653 RPS6KB1P23443 525 aa15.8■□□□□ 0.12
GTF3C1-211ENST00000569653 METAP2P50579 478 aaKnown RBP eCLIP15.8■□□□□ 0.121e-6■□□□□ 10.5
GTF3C1-211ENST00000569653 TMEM62Q0P6H9 643 aa15.8■□□□□ 0.12
GTF3C1-211ENST00000569653 EPC2Q52LR7 807 aa15.8■□□□□ 0.12
GTF3C1-211ENST00000569653 ERICH6BQ5W0A0 696 aa15.8■□□□□ 0.12
GTF3C1-211ENST00000569653 RTN4RL1Q86UN2 441 aaPredicted RBP15.8■□□□□ 0.12
GTF3C1-211ENST00000569653 RASGRP4Q8TDF6 673 aa15.8■□□□□ 0.12
GTF3C1-211ENST00000569653 LMCD1Q9NZU5 365 aa15.8■□□□□ 0.12
GTF3C1-211ENST00000569653 NAP1L2Q9ULW6 460 aaPredicted RBP15.8■□□□□ 0.12
GTF3C1-211ENST00000569653 ZBTB42B2RXF5 422 aa15.79■□□□□ 0.12
GTF3C1-211ENST00000569653 hCG_1984214I3L0E3 225 aa15.79■□□□□ 0.12
GTF3C1-211ENST00000569653 DDX39AO00148 427 aaKnown RBP15.79■□□□□ 0.12
GTF3C1-211ENST00000569653 FOSP01100 380 aaPredicted RBP15.79■□□□□ 0.12
GTF3C1-211ENST00000569653 HMGB1P09429 215 aaKnown RBP15.79■□□□□ 0.12
GTF3C1-211ENST00000569653 MRPS6P82932 125 aaKnown RBP15.79■□□□□ 0.12
GTF3C1-211ENST00000569653 AP3B2Q13367 1082 aa15.79■□□□□ 0.12
GTF3C1-211ENST00000569653 ABHD15Q6UXT9 468 aa15.79■□□□□ 0.12
GTF3C1-211ENST00000569653 CCDC60Q8IWA6 550 aaPredicted RBP15.79■□□□□ 0.12
GTF3C1-211ENST00000569653 CRIPAKQ8N1N5 446 aa15.79■□□□□ 0.12
GTF3C1-211ENST00000569653 FBXL16Q8N461 479 aa15.79■□□□□ 0.12
GTF3C1-211ENST00000569653 ZNF713Q8N859 430 aaPredicted RBP15.79■□□□□ 0.12
GTF3C1-211ENST00000569653 FBXO22Q8NEZ5 403 aa15.79■□□□□ 0.12
GTF3C1-211ENST00000569653 APBB2Q92870 758 aa15.79■□□□□ 0.12
GTF3C1-211ENST00000569653 ZMYND12Q9H0C1 365 aa15.79■□□□□ 0.12
GTF3C1-211ENST00000569653 NCOA5Q9HCD5 579 aaKnown RBP15.79■□□□□ 0.12
GTF3C1-211ENST00000569653 ESYT2A0FGR8 921 aa15.78■□□□□ 0.12
GTF3C1-211ENST00000569653 ENPP3O14638 875 aa15.78■□□□□ 0.12
GTF3C1-211ENST00000569653 CYP3A4P08684 503 aa15.78■□□□□ 0.12
GTF3C1-211ENST00000569653 CD52P31358 61 aa15.78■□□□□ 0.12
GTF3C1-211ENST00000569653 STAT5BP51692 787 aa15.78■□□□□ 0.12
GTF3C1-211ENST00000569653 TOB2Q14106 344 aaPredicted RBP15.78■□□□□ 0.12
GTF3C1-211ENST00000569653 BLOC1S2Q6QNY1 142 aa15.78■□□□□ 0.12
GTF3C1-211ENST00000569653 NIPA1Q7RTP0 329 aa15.78■□□□□ 0.12
GTF3C1-211ENST00000569653 PLPPR4Q7Z2D5 763 aa15.78■□□□□ 0.12
GTF3C1-211ENST00000569653 TEX2Q8IWB9 1127 aa15.78■□□□□ 0.12
GTF3C1-211ENST00000569653 LENG9Q96B70 501 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms