RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 RIN3Q8TB24 985 aa7.64□□□□□ -1.19
CNOT1-216ENST00000569240 EMILIN1Q9Y6C2 1016 aa7.64□□□□□ -1.19
CNOT1-216ENST00000569240 KIF21AQ7Z4S6 1674 aa7.64□□□□□ -1.19
CNOT1-216ENST00000569240 CYP7A1P22680 504 aa7.64□□□□□ -1.19
CNOT1-216ENST00000569240 PDIA3P30101 505 aaKnown RBP7.64□□□□□ -1.19
CNOT1-216ENST00000569240 ARL4CP56559 192 aa7.64□□□□□ -1.19
CNOT1-216ENST00000569240 GRM1Q13255 1194 aa7.64□□□□□ -1.19
CNOT1-216ENST00000569240 CNGA3Q16281 694 aa7.64□□□□□ -1.19
CNOT1-216ENST00000569240 JADE1Q6IE81 842 aa7.64□□□□□ -1.19
CNOT1-216ENST00000569240 BRD8Q9H0E9 1235 aa7.64□□□□□ -1.19
CNOT1-216ENST00000569240 CDHR2Q9BYE9 1310 aa7.64□□□□□ -1.19
CNOT1-216ENST00000569240 WDR46O15213 610 aaKnown RBP7.64□□□□□ -1.19
CNOT1-216ENST00000569240 BRAFP15056 766 aa7.64□□□□□ -1.19
CNOT1-216ENST00000569240 MAP4P27816 1152 aaKnown RBP7.64□□□□□ -1.19
CNOT1-216ENST00000569240 NLRP11P59045 1033 aaKnown RBP7.64□□□□□ -1.19
CNOT1-216ENST00000569240 TSPY1Q01534 308 aa7.64□□□□□ -1.19
CNOT1-216ENST00000569240 TRMT5Q32P41 509 aaKnown RBP7.64□□□□□ -1.19
CNOT1-216ENST00000569240 CDAN1Q8IWY9 1227 aa7.64□□□□□ -1.19
CNOT1-216ENST00000569240 PIGOQ8TEQ8 1089 aa7.64□□□□□ -1.19
CNOT1-216ENST00000569240 CENPTQ96BT3 561 aa7.64□□□□□ -1.19
CNOT1-216ENST00000569240 NR1H4Q96RI1 486 aaPredicted RBP7.64□□□□□ -1.19
CNOT1-216ENST00000569240 GCOM2Q9BZD3 368 aaPredicted RBP7.64□□□□□ -1.19
CNOT1-216ENST00000569240 ING2Q9H160 280 aa7.64□□□□□ -1.19
CNOT1-216ENST00000569240 ISCUQ9H1K1 167 aa7.64□□□□□ -1.19
CNOT1-216ENST00000569240 DDX28Q9NUL7 540 aaKnown RBP7.64□□□□□ -1.19
CNOT1-216ENST00000569240 MCM9Q9NXL9 1143 aa7.64□□□□□ -1.19
CNOT1-216ENST00000569240 LIMA1Q9UHB6 759 aaKnown RBP7.64□□□□□ -1.19
CNOT1-216ENST00000569240 S100BP04271 92 aaPredicted RBP7.64□□□□□ -1.19
CNOT1-216ENST00000569240 P4HA1P13674 534 aa7.64□□□□□ -1.19
CNOT1-216ENST00000569240 SCTRP47872 440 aa7.64□□□□□ -1.19
CNOT1-216ENST00000569240 ESCO1Q5FWF5 840 aa7.64□□□□□ -1.19
CNOT1-216ENST00000569240 RBM43Q6ZSC3 357 aaKnown RBP7.64□□□□□ -1.19
CNOT1-216ENST00000569240 RSRC2Q7L4I2 434 aaKnown RBP7.64□□□□□ -1.19
CNOT1-216ENST00000569240 CAAP1Q9H8G2 361 aa7.64□□□□□ -1.19
CNOT1-216ENST00000569240 OR52Z1P0C646 297 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 S100A5P33763 92 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 MRPL28Q13084 256 aaKnown RBP7.63□□□□□ -1.19
CNOT1-216ENST00000569240 LONRF3Q496Y0 759 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 PRUNE1Q86TP1 453 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 RBBP8NLQ8NC74 664 aaPredicted RBP7.63□□□□□ -1.19
CNOT1-216ENST00000569240 ACRBPQ8NEB7 543 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 CALML6Q8TD86 181 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 SCG3Q8WXD2 468 aaKnown RBP7.63□□□□□ -1.19
CNOT1-216ENST00000569240 SEPT8Q92599 483 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 CACYBPQ9HB71 228 aaKnown RBP7.63□□□□□ -1.19
CNOT1-216ENST00000569240 SH3TC1Q8TE82 1336 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 IFNAR1P17181 557 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 IL10P22301 178 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 EIF4A3P38919 411 aaKnown RBP7.63□□□□□ -1.19
CNOT1-216ENST00000569240 MFAP3P55082 362 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 RNASE9P60153 205 aaKnown RBP7.63□□□□□ -1.19
CNOT1-216ENST00000569240 KAZNQ674X7 775 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 C16orf89Q6UX73 402 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 THEMISQ8N1K5 641 aaPredicted RBP7.63□□□□□ -1.19
CNOT1-216ENST00000569240 ZCRB1Q8TBF4 217 aaKnown RBP7.63□□□□□ -1.19
CNOT1-216ENST00000569240 RBM41Q96IZ5 413 aaKnown RBP7.63□□□□□ -1.19
CNOT1-216ENST00000569240 SIKE1Q9BRV8 207 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 UNC45AQ9H3U1 944 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 RABGEF1Q9UJ41 708 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 CAPN11Q9UMQ6 739 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 WDR37Q9Y2I8 494 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 ZHX2Q9Y6X8 837 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 A0A1B0GTH6 734 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 A0A1W2PQJ5 194 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 CCDC78A2IDD5 438 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 HSPA1AP0DMV8 641 aaKnown RBP7.63□□□□□ -1.19
CNOT1-216ENST00000569240 HSPA1BP0DMV9 641 aaKnown RBP7.63□□□□□ -1.19
CNOT1-216ENST00000569240 KRT6CP48668 564 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 RAB14P61106 215 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 INPP5AQ14642 412 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 PPP2R5DQ14738 602 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 TMED2Q15363 201 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 CCDC144BQ3MJ40 725 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 KRT27Q7Z3Y8 459 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 PSMB7Q99436 277 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 PA2G4Q9UQ80 394 aaKnown RBP7.63□□□□□ -1.19
CNOT1-216ENST00000569240 PVALEFA0A1B0GWK0 134 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 AFPP02771 609 aaKnown RBP7.63□□□□□ -1.19
CNOT1-216ENST00000569240 PPARGP37231 505 aaPredicted RBP7.63□□□□□ -1.19
CNOT1-216ENST00000569240 CDK17Q00537 523 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 WLSQ5T9L3 541 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 FAM212AQ96EL1 285 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 MRPL46Q9H2W6 279 aaKnown RBP7.63□□□□□ -1.19
CNOT1-216ENST00000569240 ZNF277Q9NRM2 450 aaPredicted RBP7.63□□□□□ -1.19
CNOT1-216ENST00000569240 PPARGC1AQ9UBK2 798 aaKnown RBP7.63□□□□□ -1.19
CNOT1-216ENST00000569240 RASA4BC9J798 803 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 RASA4O43374 803 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 ARMCX6Q7L4S7 300 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 SYN2Q92777 582 aaPredicted RBP7.63□□□□□ -1.19
CNOT1-216ENST00000569240 INPP5DQ92835 1189 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 NLRC4Q9NPP4 1024 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 SPINK5Q9NQ38 1064 aaPredicted RBP7.63□□□□□ -1.19
CNOT1-216ENST00000569240 SEPT10Q9P0V9 454 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 DNAJC12Q9UKB3 198 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 PTPRKQ15262 1439 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 TOPBP1Q92547 1522 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 KANSL1LA0AUZ9 987 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 ENC1O14682 589 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 KLHL41O60662 606 aa7.63□□□□□ -1.19
CNOT1-216ENST00000569240 ATP6V1G2O95670 118 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms