RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 PLPPR4Q7Z2D5 763 aa18.83■□□□□ 0.6
COMMD4-224ENST00000568877 LINC00301Q8NCQ3 95 aa18.83■□□□□ 0.6
COMMD4-224ENST00000568877 AFAP1L1Q8TED9 768 aa18.83■□□□□ 0.6
COMMD4-224ENST00000568877 RAB34Q9BZG1 259 aa18.83■□□□□ 0.6
COMMD4-224ENST00000568877 ERAP1Q9NZ08 941 aa18.83■□□□□ 0.6
COMMD4-224ENST00000568877 GABBR1Q9UBS5 961 aa18.83■□□□□ 0.6
COMMD4-224ENST00000568877 ZNF215Q9UL58 517 aaPredicted RBP18.83■□□□□ 0.6
COMMD4-224ENST00000568877 MORC2Q9Y6X9 1032 aaPredicted RBP18.83■□□□□ 0.6
COMMD4-224ENST00000568877 VWA3AA6NCI4 1184 aa18.82■□□□□ 0.6
COMMD4-224ENST00000568877 HAS3O00219 553 aa18.82■□□□□ 0.6
COMMD4-224ENST00000568877 MARCKSP29966 332 aaPredicted RBP18.82■□□□□ 0.6
COMMD4-224ENST00000568877 SLC26A2P50443 739 aa18.82■□□□□ 0.6
COMMD4-224ENST00000568877 KRT85P78386 507 aa18.82■□□□□ 0.6
COMMD4-224ENST00000568877 MFSD10Q14728 455 aa18.82■□□□□ 0.6
COMMD4-224ENST00000568877 IGSF22Q8N9C0 903 aa18.82■□□□□ 0.6
COMMD4-224ENST00000568877 LRWD1Q9UFC0 647 aa18.82■□□□□ 0.6
COMMD4-224ENST00000568877 MAFBQ9Y5Q3 323 aaPredicted RBP18.82■□□□□ 0.6
COMMD4-224ENST00000568877 GRIN2DO15399 1336 aa18.81■□□□□ 0.6
COMMD4-224ENST00000568877 A0A0U1RQG5 324 aaPredicted RBP18.81■□□□□ 0.6
COMMD4-224ENST00000568877 P4HBP07237 508 aaKnown RBP18.81■□□□□ 0.6
COMMD4-224ENST00000568877 MARK3P27448 753 aa18.81■□□□□ 0.6
COMMD4-224ENST00000568877 CHMP4BP1P59074 171 aa18.81■□□□□ 0.6
COMMD4-224ENST00000568877 ITGA7Q13683 1181 aa18.81■□□□□ 0.6
COMMD4-224ENST00000568877 KIAA0753Q2KHM9 967 aa18.81■□□□□ 0.6
COMMD4-224ENST00000568877 NBPF20Q3BBV1 942 aa18.81■□□□□ 0.6
COMMD4-224ENST00000568877 PDXDC2PQ6P474 469 aa18.81■□□□□ 0.6
COMMD4-224ENST00000568877 SLC39A5Q6ZMH5 540 aa18.81■□□□□ 0.6
COMMD4-224ENST00000568877 CHAMP1Q96JM3 812 aa18.81■□□□□ 0.6
COMMD4-224ENST00000568877 EIF2AK1Q9BQI3 630 aaKnown RBP18.81■□□□□ 0.6
COMMD4-224ENST00000568877 RNPEPQ9H4A4 650 aa18.81■□□□□ 0.6
COMMD4-224ENST00000568877 FBXO2Q9UK22 296 aaPredicted RBP18.81■□□□□ 0.6
COMMD4-224ENST00000568877 SRPRBQ9Y5M8 271 aaKnown RBP18.81■□□□□ 0.6
COMMD4-224ENST00000568877 KIAA0100Q14667 2235 aaKnown RBP18.81■□□□□ 0.6
COMMD4-224ENST00000568877 IGSF9BQ9UPX0 1349 aa18.8■□□□□ 0.6
COMMD4-224ENST00000568877 SPTLC2O15270 562 aa18.8■□□□□ 0.6
COMMD4-224ENST00000568877 NCLP19338 710 aaKnown RBP18.8■□□□□ 0.6
COMMD4-224ENST00000568877 QARSP47897 775 aaKnown RBP18.8■□□□□ 0.6
COMMD4-224ENST00000568877 UGCGQ16739 394 aa18.8■□□□□ 0.6
COMMD4-224ENST00000568877 SLC43A3Q8NBI5 491 aa18.8■□□□□ 0.6
COMMD4-224ENST00000568877 BANK1Q8NDB2 785 aa18.8■□□□□ 0.6
COMMD4-224ENST00000568877 ERMNQ8TAM6 284 aa18.8■□□□□ 0.6
COMMD4-224ENST00000568877 NEK9Q8TD19 979 aa18.8■□□□□ 0.6
COMMD4-224ENST00000568877 ATP6V0A1Q93050 837 aa18.8■□□□□ 0.6
COMMD4-224ENST00000568877 DYDC2Q96IM9 177 aa18.8■□□□□ 0.6
COMMD4-224ENST00000568877 HSD17B14Q9BPX1 270 aa18.8■□□□□ 0.6
COMMD4-224ENST00000568877 SEZ6LQ9BYH1 1024 aa18.8■□□□□ 0.6
COMMD4-224ENST00000568877 RGL1Q9NZL6 768 aa18.8■□□□□ 0.6
COMMD4-224ENST00000568877 RCOR1Q9UKL0 485 aa18.8■□□□□ 0.6
COMMD4-224ENST00000568877 STK24Q9Y6E0 443 aa18.8■□□□□ 0.6
COMMD4-224ENST00000568877 MYH15Q9Y2K3 1946 aa18.8■□□□□ 0.6
COMMD4-224ENST00000568877 ARVCFO00192 962 aa18.79■□□□□ 0.6
COMMD4-224ENST00000568877 PPP6R2O75170 966 aa18.79■□□□□ 0.6
COMMD4-224ENST00000568877 SLITRK3O94933 977 aa18.79■□□□□ 0.6
COMMD4-224ENST00000568877 ATP4AP20648 1035 aa18.79■□□□□ 0.6
COMMD4-224ENST00000568877 LONP1P36776 959 aaKnown RBP18.79■□□□□ 0.6
COMMD4-224ENST00000568877 ATN1P54259 1190 aaPredicted RBP18.79■□□□□ 0.6
COMMD4-224ENST00000568877 PSMC5P62195 406 aa18.79■□□□□ 0.6
COMMD4-224ENST00000568877 CYP4A11Q02928 519 aa18.79■□□□□ 0.6
COMMD4-224ENST00000568877 GRIN1Q05586 938 aa18.79■□□□□ 0.6
COMMD4-224ENST00000568877 PLCB4Q15147 1175 aa18.79■□□□□ 0.6
COMMD4-224ENST00000568877 NFRKBQ6P4R8 1299 aa18.79■□□□□ 0.6
COMMD4-224ENST00000568877 CKAP2LQ8IYA6 745 aa18.79■□□□□ 0.6
COMMD4-224ENST00000568877 C7orf31Q8N865 590 aa18.79■□□□□ 0.6
COMMD4-224ENST00000568877 KRI1Q8N9T8 703 aaKnown RBP18.79■□□□□ 0.6
COMMD4-224ENST00000568877 KCNG4Q8TDN1 519 aa18.79■□□□□ 0.6
COMMD4-224ENST00000568877 AK8Q96MA6 479 aa18.79■□□□□ 0.6
COMMD4-224ENST00000568877 POTEB3A0JP26 581 aa18.78■□□□□ 0.6
COMMD4-224ENST00000568877 ZNF862O60290 1169 aa18.78■□□□□ 0.6
COMMD4-224ENST00000568877 DKC1O60832 514 aaKnown RBP eCLIP18.78■□□□□ 0.6
COMMD4-224ENST00000568877 CDK7P50613 346 aa18.78■□□□□ 0.6
COMMD4-224ENST00000568877 PTPN11Q06124 597 aaPredicted RBP18.78■□□□□ 0.6
COMMD4-224ENST00000568877 CTTNQ14247 550 aaKnown RBP18.78■□□□□ 0.6
COMMD4-224ENST00000568877 SNX17Q15036 470 aa18.78■□□□□ 0.6
COMMD4-224ENST00000568877 C1orf53Q5VUE5 145 aa18.78■□□□□ 0.6
COMMD4-224ENST00000568877 KRT79Q5XKE5 535 aa18.78■□□□□ 0.6
COMMD4-224ENST00000568877 HAUS3Q68CZ6 603 aa18.78■□□□□ 0.6
COMMD4-224ENST00000568877 POTEBQ6S5H4 581 aa18.78■□□□□ 0.6
COMMD4-224ENST00000568877 SESTD1Q86VW0 696 aa18.78■□□□□ 0.6
COMMD4-224ENST00000568877 TPH2Q8IWU9 490 aa18.78■□□□□ 0.6
COMMD4-224ENST00000568877 ATP8B4Q8TF62 1192 aa18.78■□□□□ 0.6
COMMD4-224ENST00000568877 PPP1R13LQ8WUF5 828 aa18.78■□□□□ 0.6
COMMD4-224ENST00000568877 TNPO1Q92973 898 aaKnown RBP18.78■□□□□ 0.6
COMMD4-224ENST00000568877 LXNQ9BS40 222 aa18.78■□□□□ 0.6
COMMD4-224ENST00000568877 POLR3CQ9BUI4 534 aaPredicted RBP18.78■□□□□ 0.6
COMMD4-224ENST00000568877 ZSWIM4Q9H7M6 989 aa18.78■□□□□ 0.6
COMMD4-224ENST00000568877 TUFT1Q9NNX1 390 aa18.78■□□□□ 0.6
COMMD4-224ENST00000568877 HDAC6Q9UBN7 1215 aa18.78■□□□□ 0.6
COMMD4-224ENST00000568877 PP2D1A8MPX8 630 aa18.77■□□□□ 0.6
COMMD4-224ENST00000568877 OATP04181 439 aa18.77■□□□□ 0.6
COMMD4-224ENST00000568877 SPATA31C1P0DKV0 1188 aa18.77■□□□□ 0.6
COMMD4-224ENST00000568877 SMIM10L2AP0DMW4 78 aa18.77■□□□□ 0.6
COMMD4-224ENST00000568877 SMIM10L2BP0DMW5 78 aa18.77■□□□□ 0.6
COMMD4-224ENST00000568877 RPA1P27694 616 aa18.77■□□□□ 0.6
COMMD4-224ENST00000568877 CDC25AP30304 524 aa18.77■□□□□ 0.6
COMMD4-224ENST00000568877 PRKCEQ02156 737 aa18.77■□□□□ 0.6
COMMD4-224ENST00000568877 FAM47CQ5HY64 1035 aa18.77■□□□□ 0.6
COMMD4-224ENST00000568877 CATSPER3Q86XQ3 398 aa18.77■□□□□ 0.6
COMMD4-224ENST00000568877 C4orf19Q8IY42 314 aa18.77■□□□□ 0.6
COMMD4-224ENST00000568877 SNX29Q8TEQ0 813 aa18.77■□□□□ 0.6
COMMD4-224ENST00000568877 LEO1Q8WVC0 666 aaPredicted RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms