RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 ASPHQ12797 758 aa13.38□□□□□ -0.27
CSPG4P13-202ENST00000567704 EPM2AIP1Q7L775 607 aaPredicted RBP13.38□□□□□ -0.27
CSPG4P13-202ENST00000567704 STAG2Q8N3U4 1231 aa13.38□□□□□ -0.27
CSPG4P13-202ENST00000567704 TRIM55Q9BYV6 548 aa13.38□□□□□ -0.27
CSPG4P13-202ENST00000567704 RBM12Q9NTZ6 932 aaKnown RBP13.38□□□□□ -0.27
CSPG4P13-202ENST00000567704 TFR2Q9UP52 801 aa13.38□□□□□ -0.27
CSPG4P13-202ENST00000567704 NOC2LQ9Y3T9 749 aaKnown RBP13.38□□□□□ -0.27
CSPG4P13-202ENST00000567704 DNAJC8O75937 253 aaPredicted RBP13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 FAM107AO95990 144 aa13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 GYPCP04921 128 aa13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 MFAP3P55082 362 aa13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 RPS6KA2Q15349 733 aa13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 PACS2Q86VP3 889 aa13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 PROCA1Q8NCQ7 364 aaPredicted RBP13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 SGSM3Q96HU1 749 aa13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 TTC1Q99614 292 aa13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 TMEM60Q9H2L4 133 aa13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 AGPAT5Q9NUQ2 364 aa13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 FBXO2Q9UK22 296 aaPredicted RBP13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 UBAP1LF5GYI3 381 aa13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 H7C0C1 242 aa13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 ATP5OP48047 213 aa13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 CHRNDQ07001 517 aa13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 PTGISQ16647 500 aa13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 BBS9Q3SYG4 887 aa13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 MMEL1Q495T6 779 aa13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 FAM102BQ5T8I3 360 aa13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 KRT80Q6KB66 452 aa13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 TRIML2Q8N7C3 387 aa13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 PDZD8Q8NEN9 1154 aa13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 CDK12Q9NYV4 1490 aaPredicted RBP13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 PP2D1A8MPX8 630 aa13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 SAT1P21673 171 aa13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 RWDD2BP57060 319 aa13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 CDR2Q01850 454 aa13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 ZBTB17Q13105 803 aa13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 LONP2Q86WA8 852 aa13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 CPXCR1Q8N123 301 aa13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 NT5C1BQ96P26 610 aa13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 G3BP2Q9UN86 482 aaKnown RBP13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 TCP11X1B4DZS4 312 aa13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 GIPC1O14908 333 aa13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 ZWINTO95229 277 aa13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 SLC12A2P55011 1212 aa13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 TCP10Q12799 353 aa13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 KRT81Q14533 505 aa13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 NME8Q8N427 588 aa13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 TTC17Q96AE7 1141 aa13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 PRMT1Q99873 361 aaKnown RBP13.37□□□□□ -0.27
CSPG4P13-202ENST00000567704 AK9Q5TCS8 1911 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 TOM1L1O75674 476 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 PRPF6O94906 941 aaKnown RBP13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 CYB5D1Q6P9G0 228 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 USP49Q70CQ1 688 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 UNC13DQ70J99 1090 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 KIRREL3Q8IZU9 778 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 DDX17Q92841 729 aaKnown RBP13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 PIGSQ96S52 555 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 LY9Q9HBG7 655 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 SAYSD1Q9NPB0 183 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 THRAP3Q9Y2W1 955 aaKnown RBP13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 TTLL3Q9Y4R7 772 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 PCDHA1Q9Y5I3 950 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 PSMD14O00487 310 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 SASH3O75995 380 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 HAUS5O94927 633 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 MYCNP04198 464 aaPredicted RBP13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 PLA2G4BP0C869 781 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 CHN1P15882 459 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 MCAMP43121 646 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 RPS8P62241 208 aaKnown RBP13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 ANKRD20A4Q4UJ75 823 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 ANKRD20A8PQ5CZ79 823 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 ANKRD20A2Q5SQ80 823 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 ANKRD20A1Q5TYW2 823 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 RFX8Q6ZV50 586 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 COA7Q96BR5 231 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 CARD10Q9BWT7 1032 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 PCIF1Q9H4Z3 704 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 KIF1BO60333 1816 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 A2ML1A8K2U0 1454 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 TRPM1Q7Z4N2 1603 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 STXBP3O00186 592 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 STAM2O75886 525 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 ERFP50548 548 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 DYNLT1P63172 113 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 SATB1Q01826 763 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 BYSLQ13895 437 aaKnown RBP13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 FOXR1Q6PIV2 292 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 DPP8Q6V1X1 898 aaPredicted RBP13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 PNMA2Q9UL42 364 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 CFLARO15519 480 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 BASP1P80723 227 aaKnown RBP13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 TBC1D10BQ4KMP7 808 aaPredicted RBP13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 NSMFQ6X4W1 530 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 RHOT2Q8IXI1 618 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 KIF2BQ8N4N8 673 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 NSMCE1Q8WV22 266 aa13.36□□□□□ -0.27
CSPG4P13-202ENST00000567704 SCYL1Q96KG9 808 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms