RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 GLDCP23378 1020 aa6.8□□□□□ -1.32
SHCBP1-206ENST00000567698 PTX3P26022 381 aaPredicted RBP6.8□□□□□ -1.32
SHCBP1-206ENST00000567698 KIF11P52732 1056 aa6.8□□□□□ -1.32
SHCBP1-206ENST00000567698 HERVK_113P62684 666 aa6.8□□□□□ -1.32
SHCBP1-206ENST00000567698 HTRA3P83110 453 aa6.8□□□□□ -1.32
SHCBP1-206ENST00000567698 ADAM9Q13443 819 aa6.8□□□□□ -1.32
SHCBP1-206ENST00000567698 STAT4Q14765 748 aa6.8□□□□□ -1.32
SHCBP1-206ENST00000567698 SMARCC2Q8TAQ2 1214 aa6.8□□□□□ -1.32
SHCBP1-206ENST00000567698 FOXRED1Q96CU9 486 aaPredicted RBP6.8□□□□□ -1.32
SHCBP1-206ENST00000567698 GORASP1Q9BQQ3 440 aa6.8□□□□□ -1.32
SHCBP1-206ENST00000567698 ZKSCAN5Q9Y2L8 839 aa6.8□□□□□ -1.32
SHCBP1-206ENST00000567698 PHLDB1Q86UU1 1377 aa6.8□□□□□ -1.32
SHCBP1-206ENST00000567698 H7C1D1 291 aa6.79□□□□□ -1.32
SHCBP1-206ENST00000567698 GPR39O43194 453 aa6.79□□□□□ -1.32
SHCBP1-206ENST00000567698 ZEB2O60315 1214 aa6.79□□□□□ -1.32
SHCBP1-206ENST00000567698 MMEP08473 750 aa6.79□□□□□ -1.32
SHCBP1-206ENST00000567698 AOAHP28039 575 aa6.79□□□□□ -1.32
SHCBP1-206ENST00000567698 ITGA1P56199 1179 aa6.79□□□□□ -1.32
SHCBP1-206ENST00000567698 SMAD3P84022 425 aaKnown RBP6.79□□□□□ -1.32
SHCBP1-206ENST00000567698 SSPNQ14714 243 aa6.79□□□□□ -1.32
SHCBP1-206ENST00000567698 TARBP2Q15633 366 aaKnown RBP6.79□□□□□ -1.32
SHCBP1-206ENST00000567698 SMAD2Q15796 467 aaKnown RBP6.79□□□□□ -1.32
SHCBP1-206ENST00000567698 CD300LDQ6UXZ3 194 aa6.79□□□□□ -1.32
SHCBP1-206ENST00000567698 SYDE1Q6ZW31 735 aaPredicted RBP6.79□□□□□ -1.32
SHCBP1-206ENST00000567698 RTN4RL1Q86UN2 441 aaPredicted RBP6.79□□□□□ -1.32
SHCBP1-206ENST00000567698 POU5F2Q8N7G0 328 aa6.79□□□□□ -1.32
SHCBP1-206ENST00000567698 LINC00482Q8N8I6 264 aa6.79□□□□□ -1.32
SHCBP1-206ENST00000567698 PRPF38AQ8NAV1 312 aaKnown RBP6.79□□□□□ -1.32
SHCBP1-206ENST00000567698 ASB15Q8WXK1 588 aa6.79□□□□□ -1.32
SHCBP1-206ENST00000567698 DDX11Q96FC9 970 aa6.79□□□□□ -1.32
SHCBP1-206ENST00000567698 FAM84AQ96KN4 292 aa6.79□□□□□ -1.32
SHCBP1-206ENST00000567698 MS4A5Q9H3V2 200 aa6.79□□□□□ -1.32
SHCBP1-206ENST00000567698 IFT22Q9H7X7 185 aa6.79□□□□□ -1.32
SHCBP1-206ENST00000567698 NOP58Q9Y2X3 529 aaKnown RBP6.79□□□□□ -1.32
SHCBP1-206ENST00000567698 RNF114Q9Y508 228 aa6.79□□□□□ -1.32
SHCBP1-206ENST00000567698 ZNF839A8K0R7 811 aa6.78□□□□□ -1.32
SHCBP1-206ENST00000567698 CDK11BP21127 795 aaKnown RBP6.78□□□□□ -1.32
SHCBP1-206ENST00000567698 MC4RP32245 332 aa6.78□□□□□ -1.32
SHCBP1-206ENST00000567698 LIMS1P48059 325 aa6.78□□□□□ -1.32
SHCBP1-206ENST00000567698 DLX2Q07687 328 aaPredicted RBP6.78□□□□□ -1.32
SHCBP1-206ENST00000567698 TMEM132BQ14DG7 1078 aa6.78□□□□□ -1.32
SHCBP1-206ENST00000567698 CT47A1Q5JQC4 288 aaPredicted RBP6.78□□□□□ -1.32
SHCBP1-206ENST00000567698 ZNF648Q5T619 568 aaPredicted RBP6.78□□□□□ -1.32
SHCBP1-206ENST00000567698 DTX3Q8N9I9 347 aa6.78□□□□□ -1.32
SHCBP1-206ENST00000567698 KCNN1Q92952 543 aa6.78□□□□□ -1.32
SHCBP1-206ENST00000567698 USP7Q93009 1102 aa6.78□□□□□ -1.32
SHCBP1-206ENST00000567698 TTC1Q99614 292 aa6.78□□□□□ -1.32
SHCBP1-206ENST00000567698 CD320Q9NPF0 282 aa6.78□□□□□ -1.32
SHCBP1-206ENST00000567698 PRAMEF25A6NGN4 478 aa6.77□□□□□ -1.33
SHCBP1-206ENST00000567698 FOXP2O15409 715 aa6.77□□□□□ -1.33
SHCBP1-206ENST00000567698 HIP1RO75146 1068 aa6.77□□□□□ -1.33
SHCBP1-206ENST00000567698 CYP2C8P10632 490 aa6.77□□□□□ -1.33
SHCBP1-206ENST00000567698 FNTBP49356 437 aa6.77□□□□□ -1.33
SHCBP1-206ENST00000567698 KPNA1P52294 538 aaPredicted RBP6.77□□□□□ -1.33
SHCBP1-206ENST00000567698 EVA1CP58658 441 aa6.77□□□□□ -1.33
SHCBP1-206ENST00000567698 IL2P60568 153 aa6.77□□□□□ -1.33
SHCBP1-206ENST00000567698 PHC1P78364 1004 aa6.77□□□□□ -1.33
SHCBP1-206ENST00000567698 FOXO4P98177 505 aa6.77□□□□□ -1.33
SHCBP1-206ENST00000567698 CILP2Q8IUL8 1156 aa6.77□□□□□ -1.33
SHCBP1-206ENST00000567698 ZCRB1Q8TBF4 217 aaKnown RBP6.77□□□□□ -1.33
SHCBP1-206ENST00000567698 STAG1Q8WVM7 1258 aa6.77□□□□□ -1.33
SHCBP1-206ENST00000567698 AMNQ9BXJ7 453 aa6.77□□□□□ -1.33
SHCBP1-206ENST00000567698 TRIM8Q9BZR9 551 aa6.77□□□□□ -1.33
SHCBP1-206ENST00000567698 ACSS2Q9NR19 701 aa6.77□□□□□ -1.33
SHCBP1-206ENST00000567698 APOBEC2Q9Y235 224 aaKnown RBP6.77□□□□□ -1.33
SHCBP1-206ENST00000567698 GOLGA6L22H0YM25 854 aa6.76□□□□□ -1.33
SHCBP1-206ENST00000567698 BRINP1O60477 761 aa6.76□□□□□ -1.33
SHCBP1-206ENST00000567698 FARP2O94887 1054 aaPredicted RBP6.76□□□□□ -1.33
SHCBP1-206ENST00000567698 C1QTNF9P0C862 333 aa6.76□□□□□ -1.33
SHCBP1-206ENST00000567698 PFKLP17858 780 aa6.76□□□□□ -1.33
SHCBP1-206ENST00000567698 NCLP19338 710 aaKnown RBP6.76□□□□□ -1.33
SHCBP1-206ENST00000567698 NKX3-2P78367 333 aa6.76□□□□□ -1.33
SHCBP1-206ENST00000567698 PFKPQ01813 784 aa6.76□□□□□ -1.33
SHCBP1-206ENST00000567698 TERF2Q15554 542 aa6.76□□□□□ -1.33
SHCBP1-206ENST00000567698 GPR158Q5T848 1215 aa6.76□□□□□ -1.33
SHCBP1-206ENST00000567698 TMEM132EQ6IEE7 984 aa6.76□□□□□ -1.33
SHCBP1-206ENST00000567698 TMC5Q6UXY8 1006 aa6.76□□□□□ -1.33
SHCBP1-206ENST00000567698 STK32CQ86UX6 486 aa6.76□□□□□ -1.33
SHCBP1-206ENST00000567698 FAM129CQ86XR2 697 aa6.76□□□□□ -1.33
SHCBP1-206ENST00000567698 SIGLEC10Q96LC7 697 aa6.76□□□□□ -1.33
SHCBP1-206ENST00000567698 YIPF4Q9BSR8 244 aa6.76□□□□□ -1.33
SHCBP1-206ENST00000567698 C11orf84Q9BUA3 381 aaPredicted RBP6.76□□□□□ -1.33
SHCBP1-206ENST00000567698 VTA1Q9NP79 307 aa6.76□□□□□ -1.33
SHCBP1-206ENST00000567698 SLC39A2Q9NP94 309 aa6.76□□□□□ -1.33
SHCBP1-206ENST00000567698 NGRNQ9NPE2 291 aaKnown RBP6.76□□□□□ -1.33
SHCBP1-206ENST00000567698 LCHNA4D1U4 455 aa6.75□□□□□ -1.33
SHCBP1-206ENST00000567698 IL18BPO95998 194 aa6.75□□□□□ -1.33
SHCBP1-206ENST00000567698 TMEM253P0C7T8 217 aa6.75□□□□□ -1.33
SHCBP1-206ENST00000567698 MOGSQ13724 837 aa6.75□□□□□ -1.33
SHCBP1-206ENST00000567698 LRRC32Q14392 662 aa6.75□□□□□ -1.33
SHCBP1-206ENST00000567698 EPHA7Q15375 998 aa6.75□□□□□ -1.33
SHCBP1-206ENST00000567698 ATP13A4Q4VNC1 1196 aa6.75□□□□□ -1.33
SHCBP1-206ENST00000567698 PRR31Q5SQ13 230 aa6.75□□□□□ -1.33
SHCBP1-206ENST00000567698 ATG14Q6ZNE5 492 aa6.75□□□□□ -1.33
SHCBP1-206ENST00000567698 ZC3H18Q86VM9 953 aaKnown RBP6.75□□□□□ -1.33
SHCBP1-206ENST00000567698 CLRN3Q8NCR9 226 aa6.75□□□□□ -1.33
SHCBP1-206ENST00000567698 WDR66Q8TBY9 1149 aa6.75□□□□□ -1.33
SHCBP1-206ENST00000567698 COG1Q8WTW3 980 aa6.75□□□□□ -1.33
SHCBP1-206ENST00000567698 GBP4Q96PP9 640 aa6.75□□□□□ -1.33
SHCBP1-206ENST00000567698 SEMA4AQ9H3S1 761 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms