RNA–Protein interactions for RNA: ENST00000566723.1

SMPD3-208, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-208ENST00000566723 TTC3P53804 2025 aa17.36■□□□□ 0.37
SMPD3-208ENST00000566723 NID2Q14112 1375 aa17.36■□□□□ 0.37
SMPD3-208ENST00000566723 EVPLQ92817 2033 aa17.35■□□□□ 0.37
SMPD3-208ENST00000566723 CCDC196A0A1B0GTZ2 297 aa17.35■□□□□ 0.37
SMPD3-208ENST00000566723 MBLAC1A4D2B0 266 aaPredicted RBP17.35■□□□□ 0.37
SMPD3-208ENST00000566723 SMCO2A6NFE2 343 aa17.35■□□□□ 0.37
SMPD3-208ENST00000566723 CPA1P15085 419 aa17.35■□□□□ 0.37
SMPD3-208ENST00000566723 HSPA4P34932 840 aa17.35■□□□□ 0.37
SMPD3-208ENST00000566723 CLK2P49760 499 aaKnown RBP17.35■□□□□ 0.37
SMPD3-208ENST00000566723 TFF2Q03403 129 aa17.35■□□□□ 0.37
SMPD3-208ENST00000566723 AAK1Q2M2I8 961 aa17.35■□□□□ 0.37
SMPD3-208ENST00000566723 RSPH3Q86UC2 560 aa17.35■□□□□ 0.37
SMPD3-208ENST00000566723 CYP2W1Q8TAV3 490 aa17.35■□□□□ 0.37
SMPD3-208ENST00000566723 CCDC136Q96JN2 1154 aa17.35■□□□□ 0.37
SMPD3-208ENST00000566723 JAKMIP1Q96N16 626 aaKnown RBP17.35■□□□□ 0.37
SMPD3-208ENST00000566723 PCYT2Q99447 389 aa17.35■□□□□ 0.37
SMPD3-208ENST00000566723 SUGCTQ9HAC7 445 aa17.35■□□□□ 0.37
SMPD3-208ENST00000566723 LMCD1Q9NZU5 365 aa17.35■□□□□ 0.37
SMPD3-208ENST00000566723 ATG2AQ2TAZ0 1938 aa17.35■□□□□ 0.37
SMPD3-208ENST00000566723 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.34■□□□□ 0.37
SMPD3-208ENST00000566723 BDP1A6H8Y1 2624 aa17.34■□□□□ 0.37
SMPD3-208ENST00000566723 CHRNA1P02708 482 aa17.34■□□□□ 0.37
SMPD3-208ENST00000566723 SCG2P13521 617 aa17.34■□□□□ 0.37
SMPD3-208ENST00000566723 ACTR2P61160 394 aa17.34■□□□□ 0.37
SMPD3-208ENST00000566723 MGAT3Q09327 533 aa17.34■□□□□ 0.37
SMPD3-208ENST00000566723 APOBRQ0VD83 1088 aa17.34■□□□□ 0.37
SMPD3-208ENST00000566723 PFKFB3Q16875 520 aaPredicted RBP17.34■□□□□ 0.37
SMPD3-208ENST00000566723 BLOC1S2Q6QNY1 142 aa17.34■□□□□ 0.37
SMPD3-208ENST00000566723 Q6ZUG5 572 aa17.34■□□□□ 0.37
SMPD3-208ENST00000566723 TOP1MTQ969P6 601 aa17.34■□□□□ 0.37
SMPD3-208ENST00000566723 UHRF1Q96T88 793 aaPredicted RBP17.34■□□□□ 0.37
SMPD3-208ENST00000566723 YME1L1Q96TA2 773 aa17.34■□□□□ 0.37
SMPD3-208ENST00000566723 AZI2Q9H6S1 392 aa17.34■□□□□ 0.37
SMPD3-208ENST00000566723 TMEM260Q9NX78 707 aa17.34■□□□□ 0.37
SMPD3-208ENST00000566723 COG5Q9UP83 839 aa17.34■□□□□ 0.37
SMPD3-208ENST00000566723 SNX14Q9Y5W7 946 aa17.34■□□□□ 0.37
SMPD3-208ENST00000566723 MEIS1O00470 390 aa17.33■□□□□ 0.36
SMPD3-208ENST00000566723 RPLP2P05387 115 aaKnown RBP17.33■□□□□ 0.36
SMPD3-208ENST00000566723 ARP10275 920 aa17.33■□□□□ 0.36
SMPD3-208ENST00000566723 GHRP10912 638 aa17.33■□□□□ 0.36
SMPD3-208ENST00000566723 ADD1P35611 737 aaKnown RBP17.33■□□□□ 0.36
SMPD3-208ENST00000566723 IGBP1P78318 339 aa17.33■□□□□ 0.36
SMPD3-208ENST00000566723 ITGB3BPQ13352 177 aaPredicted RBP17.33■□□□□ 0.36
SMPD3-208ENST00000566723 MARCH8Q5T0T0 291 aa17.33■□□□□ 0.36
SMPD3-208ENST00000566723 FBXO22Q8NEZ5 403 aa17.33■□□□□ 0.36
SMPD3-208ENST00000566723 BRF1Q92994 677 aa17.33■□□□□ 0.36
SMPD3-208ENST00000566723 C17orf80Q9BSJ5 609 aa17.33■□□□□ 0.36
SMPD3-208ENST00000566723 AGO4Q9HCK5 861 aaKnown RBP17.33■□□□□ 0.36
SMPD3-208ENST00000566723 MYO7AQ13402 2215 aa17.32■□□□□ 0.36
SMPD3-208ENST00000566723 ESYT2A0FGR8 921 aa17.32■□□□□ 0.36
SMPD3-208ENST00000566723 RRN3P2A6NIE6 340 aa17.32■□□□□ 0.36
SMPD3-208ENST00000566723 INSRRP14616 1297 aa17.32■□□□□ 0.36
SMPD3-208ENST00000566723 ZNF76P36508 570 aa17.32■□□□□ 0.36
SMPD3-208ENST00000566723 LPIN1Q14693 890 aa17.32■□□□□ 0.36
SMPD3-208ENST00000566723 NIPA1Q7RTP0 329 aa17.32■□□□□ 0.36
SMPD3-208ENST00000566723 FBXL16Q8N461 479 aa17.32■□□□□ 0.36
SMPD3-208ENST00000566723 DNAJB3Q8WWF6 145 aa17.32■□□□□ 0.36
SMPD3-208ENST00000566723 TNPO1Q92973 898 aaKnown RBP17.32■□□□□ 0.36
SMPD3-208ENST00000566723 SAMD11Q96NU1 681 aa17.32■□□□□ 0.36
SMPD3-208ENST00000566723 AGXT2Q9BYV1 514 aa17.32■□□□□ 0.36
SMPD3-208ENST00000566723 TRPC6Q9Y210 931 aa17.32■□□□□ 0.36
SMPD3-208ENST00000566723 CDY2AQ9Y6F7 541 aa17.32■□□□□ 0.36
SMPD3-208ENST00000566723 KIAA1671Q9BY89 1806 aa17.31■□□□□ 0.36
SMPD3-208ENST00000566723 UPP2O95045 317 aa17.31■□□□□ 0.36
SMPD3-208ENST00000566723 REC8O95072 547 aa17.31■□□□□ 0.36
SMPD3-208ENST00000566723 BMP1P13497 986 aa17.31■□□□□ 0.36
SMPD3-208ENST00000566723 RPS6KB1P23443 525 aa17.31■□□□□ 0.36
SMPD3-208ENST00000566723 KCNQ1P51787 676 aa17.31■□□□□ 0.36
SMPD3-208ENST00000566723 MRPS6P82932 125 aaKnown RBP17.31■□□□□ 0.36
SMPD3-208ENST00000566723 PLCB4Q15147 1175 aa17.31■□□□□ 0.36
SMPD3-208ENST00000566723 FBXO47Q5MNV8 452 aa17.31■□□□□ 0.36
SMPD3-208ENST00000566723 JAKMIP3Q5VZ66 844 aa17.31■□□□□ 0.36
SMPD3-208ENST00000566723 PLPPR4Q7Z2D5 763 aa17.31■□□□□ 0.36
SMPD3-208ENST00000566723 CCDC12Q8WUD4 166 aaPredicted RBP17.31■□□□□ 0.36
SMPD3-208ENST00000566723 HLA-CQ95604 372 aa17.31■□□□□ 0.36
SMPD3-208ENST00000566723 ZMYND12Q9H0C1 365 aa17.31■□□□□ 0.36
SMPD3-208ENST00000566723 FAM86B1E9PN63 330 aa17.3■□□□□ 0.36
SMPD3-208ENST00000566723 ATG7O95352 703 aa17.3■□□□□ 0.36
SMPD3-208ENST00000566723 FAM86B2P0C5J1 330 aa17.3■□□□□ 0.36
SMPD3-208ENST00000566723 STAT5BP51692 787 aa17.3■□□□□ 0.36
SMPD3-208ENST00000566723 TSHZ1Q6ZSZ6 1077 aa17.3■□□□□ 0.36
SMPD3-208ENST00000566723 REXO1Q8N1G1 1221 aaKnown RBP17.3■□□□□ 0.36
SMPD3-208ENST00000566723 CRYGNQ8WXF5 182 aa17.3■□□□□ 0.36
SMPD3-208ENST00000566723 ZBTB10Q96DT7 871 aa17.3■□□□□ 0.36
SMPD3-208ENST00000566723 FAM49AQ9H0Q0 323 aaPredicted RBP17.3■□□□□ 0.36
SMPD3-208ENST00000566723 IGLV3-22A0A075B6J6 115 aa17.29■□□□□ 0.36
SMPD3-208ENST00000566723 POTEB3A0JP26 581 aa17.29■□□□□ 0.36
SMPD3-208ENST00000566723 DDX39AO00148 427 aaKnown RBP17.29■□□□□ 0.36
SMPD3-208ENST00000566723 PRPF3O43395 683 aaKnown RBP17.29■□□□□ 0.36
SMPD3-208ENST00000566723 CCNE2O96020 404 aa17.29■□□□□ 0.36
SMPD3-208ENST00000566723 CYP3A4P08684 503 aa17.29■□□□□ 0.36
SMPD3-208ENST00000566723 PSMA5P28066 241 aa17.29■□□□□ 0.36
SMPD3-208ENST00000566723 SLC26A2P50443 739 aa17.29■□□□□ 0.36
SMPD3-208ENST00000566723 SETQ01105 290 aaPredicted RBP17.29■□□□□ 0.36
SMPD3-208ENST00000566723 PKN1Q16512 942 aa17.29■□□□□ 0.36
SMPD3-208ENST00000566723 EPC2Q52LR7 807 aa17.29■□□□□ 0.36
SMPD3-208ENST00000566723 MCTP2Q6DN12 878 aa17.29■□□□□ 0.36
SMPD3-208ENST00000566723 POTEBQ6S5H4 581 aa17.29■□□□□ 0.36
SMPD3-208ENST00000566723 PLA2G4DQ86XP0 818 aa17.29■□□□□ 0.36
SMPD3-208ENST00000566723 TRAPPC12Q8WVT3 735 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms